Jatropha Genome Database

JcCB0008321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008321.10 + phase: 0 /pseudo/partial
         (160 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g40050.1                                                        99   1e-21
Glyma03g01910.1                                                        99   1e-21
Glyma07g08520.1                                                        99   2e-21

>Glyma09g40050.1 
          Length = 559

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 13/110 (11%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V E+ Q LAEEG  + MINL++CGIL              TA+N+NL+R +IS+  +R
Sbjct: 305 SAVPEVRQALAEEGIVRVMINLLNCGILLGSKEHAAECLQNLTASNENLRRNVISEGGVR 364

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLG 102
           + LAYLDGPLPQES V  L+NLV  V  E + SLG +  L HV++ GSLG
Sbjct: 365 SLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLIPRLAHVLKSGSLG 414


>Glyma03g01910.1 
          Length = 565

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 13/113 (11%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V E+ Q LAEEG  + MI+L++CGIL              T +N+ L++ +IS+  +R
Sbjct: 311 SAVPEVRQALAEEGIVRVMISLLNCGILLGSKEYAAECLQNLTLSNEYLRKSVISEGGVR 370

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
           + LAYLDGPLPQES V  LKNL+  VS E + SLG +  L+HV++ GSLGAQ+
Sbjct: 371 SLLAYLDGPLPQESAVGALKNLIGSVSEETLVSLGLVPCLVHVLKSGSLGAQQ 423


>Glyma07g08520.1 
          Length = 565

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/113 (47%), Positives = 75/113 (66%), Gaps = 13/113 (11%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V E+ Q LAEEG  + MINL++ GIL              T++N++L++ ++S+  +R
Sbjct: 311 SAVPEVRQALAEEGIVRVMINLLNYGILLGSKEYAAECLQNLTSSNEHLRKSVVSEGGVR 370

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
           + LAYLDGPLPQES V  LKNLV  VS E + SLG +  L+HV++ GSLGAQ+
Sbjct: 371 SLLAYLDGPLPQESAVGALKNLVGSVSEETLVSLGLVPCLVHVLKSGSLGAQQ 423