Jatropha Genome Database

JcCB0008031.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008031.20 + phase: 0 
         (481 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g44010.1                                                       615   e-176
Glyma03g41420.2                                                       605   e-173
Glyma03g41420.1                                                       603   e-172

>Glyma19g44010.1 
          Length = 478

 Score =  615 bits (1587), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 323/486 (66%), Positives = 372/486 (76%), Gaps = 20/486 (4%)

Query: 4   AANSIYLSHEESISSSYI--KSGIE-----RFHGRKGLHFR-SIVVLKILPNSRKSRRHV 55
            A+S+ LSH E   +  +  K+G+      RFH  +G  +  S+VVLK+L  +RK  R  
Sbjct: 5   GAHSMLLSHGEGTGTPKVCVKAGLTVRGDLRFHRTRGFKYAPSVVVLKVLATARKPTR-- 62

Query: 56  QLIRSYRNYCGLVLRCSHQFSGWTNKFPSFSSTAASINKAKEVLNFLMLSVSNNLKEKGQ 115
             +R  R YC +  +  H   G+      FS T + I + + +L F    +   LK+   
Sbjct: 63  --LRLLRPYCSVRGQHDHG-KGY------FSPTNSQIPR-QHILKFAADRMLAFLKDWSN 112

Query: 116 LQFLKVAGILACALLVIPSADAVDALKTCACLLKECRLELXXXXXXXXXXXXXXXLQTCN 175
           L+   VAGIL   L++IP ADAVDALKTCACLLK+CR+EL               LQTCN
Sbjct: 113 LRITAVAGILVSVLMIIPPADAVDALKTCACLLKDCRIELAKCLSNPSCAANIACLQTCN 172

Query: 176 NRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPKKSDVGEFPVPDPAVLVKSFNIAD 235
           NRPDETECQIKCGDLFEN+VVDEFNECAVSRKKCVPKKSDVGEFP P+P VLV SFNIA+
Sbjct: 173 NRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPAPNPDVLVNSFNIAE 232

Query: 236 FSGKWFITSGLNPTFDTFDCQLHDFHRESNRLVGNLSWRIRTPDGGFFTRSTVQKFVQDP 295
           FSGKWFITSGLNPTFDTFDCQLH+FH ESN+LVGNLSWRIRTPD GF TRS  Q+FVQDP
Sbjct: 233 FSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRIRTPDAGFITRSAEQRFVQDP 292

Query: 296 LQPGILYNHDNEYLHYQDDWYILSSKLENSENDYIFVYYRGRNDAWDGYGGAVVYTRSAV 355
             PGILYNHDN+YLHYQDDWYILSSK+EN  +DY+FVYYRGRNDAWDGYGGAVVYTRSAV
Sbjct: 293 SYPGILYNHDNKYLHYQDDWYILSSKIENKSDDYVFVYYRGRNDAWDGYGGAVVYTRSAV 352

Query: 356 LPESIIPELETAAKKVGRDFNKFIITDNTCGPEPPLAERIEKTVEEGEKTIIREVEEIEG 415
           LPESI+PELE A+K VGRDF+KFI TDNTCGPEP L ER+EK VEEGE+TI+REVE+IE 
Sbjct: 353 LPESIVPELEKASKSVGRDFSKFIRTDNTCGPEPSLVERLEKKVEEGEETIVREVEQIEE 412

Query: 416 NVEKVGKTEMALFQRLAEGFKELQQDEEFFVRELSKEEMDILNDLKMEAGEVEKLFGEAL 475
            VEKVGKTE  LFQ+LAEGFK  Q+DEE F+R LSKEEM+IL+ LKMEAGEVEKLFG AL
Sbjct: 413 EVEKVGKTEATLFQKLAEGFKMFQEDEENFLRGLSKEEMEILDGLKMEAGEVEKLFGRAL 472

Query: 476 PLRKLR 481
           P+RKLR
Sbjct: 473 PIRKLR 478


>Glyma03g41420.2 
          Length = 478

 Score =  605 bits (1561), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 317/490 (64%), Positives = 368/490 (75%), Gaps = 21/490 (4%)

Query: 1   MAL-AANSIYLSHEESISSS--YIKSGIE-----RFHGRKGLHF-RSIVVLKILPNSRKS 51
           MA+   +S+ L++ E   +    IK+G+      RFH   G  +  S+VVLK+   +++ 
Sbjct: 1   MAMWGGHSMLLTNGEGTGTPNVRIKAGLTVRGDLRFHRTAGFKYGPSVVVLKVFSTAKRP 60

Query: 52  RRHVQLIRSYRNYCGLVLRCSHQFSGWTNKFPSFSSTAASINKAKEVLNFLMLSVSNNLK 111
            R    +R  R YC L         G  N+   +SS  ++    + +L F    +   LK
Sbjct: 61  TR----LRLIRPYCSL--------RGQHNQGKGYSSLTSTQKPRQLMLKFEADRMLVFLK 108

Query: 112 EKGQLQFLKVAGILACALLVIPSADAVDALKTCACLLKECRLELXXXXXXXXXXXXXXXL 171
           +   ++   VA IL   L++IP ADAVDALKTCACLLK+CR+EL               L
Sbjct: 109 DWSNIRITAVAAILVSILMIIPPADAVDALKTCACLLKDCRIELAKCLSNPSCAANIACL 168

Query: 172 QTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPKKSDVGEFPVPDPAVLVKSF 231
           QTCNNRPDETECQIKCGDLFEN+VVDEFNECAVSRKKCVPKKSDVGEFP P+P VLV SF
Sbjct: 169 QTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPAPNPDVLVNSF 228

Query: 232 NIADFSGKWFITSGLNPTFDTFDCQLHDFHRESNRLVGNLSWRIRTPDGGFFTRSTVQKF 291
           NIADFSGKWFITSGLNPTFDTFDCQLH+FH ESN+LVGNLSWRIRTPD GF TRS  Q+F
Sbjct: 229 NIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRIRTPDAGFITRSAEQRF 288

Query: 292 VQDPLQPGILYNHDNEYLHYQDDWYILSSKLENSENDYIFVYYRGRNDAWDGYGGAVVYT 351
           VQDP  PGILYNHDNEYLHYQDDWYILSSK+EN  +DY+FVYYRGRNDAWDGYGGAV+YT
Sbjct: 289 VQDPSYPGILYNHDNEYLHYQDDWYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVIYT 348

Query: 352 RSAVLPESIIPELETAAKKVGRDFNKFIITDNTCGPEPPLAERIEKTVEEGEKTIIREVE 411
           RSAVLPESI+PELE AAK VGRDF+ FI TDNTCGPEP L ER+EK VEEGE+TI+REVE
Sbjct: 349 RSAVLPESIVPELEKAAKSVGRDFSTFIRTDNTCGPEPSLVERLEKKVEEGEETIVREVE 408

Query: 412 EIEGNVEKVGKTEMALFQRLAEGFKELQQDEEFFVRELSKEEMDILNDLKMEAGEVEKLF 471
           ++E  VEKVGKTE  LFQ+LAEGFK  Q+DEE F+R LSKEEM+IL+ LKMEAGEVEKLF
Sbjct: 409 QLEEEVEKVGKTEATLFQKLAEGFKVFQEDEENFLRGLSKEEMEILDGLKMEAGEVEKLF 468

Query: 472 GEALPLRKLR 481
           G ALP+RKLR
Sbjct: 469 GRALPIRKLR 478


>Glyma03g41420.1 
          Length = 498

 Score =  603 bits (1555), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/467 (66%), Positives = 357/467 (76%), Gaps = 18/467 (3%)

Query: 21  IKSGIE-----RFHGRKGLHF-RSIVVLKILPNSRKSRRHVQLIRSYRNYCGLVLRCSHQ 74
           IK+G+      RFH   G  +  S+VVLK+   +++  R    +R  R YC L       
Sbjct: 44  IKAGLTVRGDLRFHRTAGFKYGPSVVVLKVFSTAKRPTR----LRLIRPYCSL------- 92

Query: 75  FSGWTNKFPSFSSTAASINKAKEVLNFLMLSVSNNLKEKGQLQFLKVAGILACALLVIPS 134
             G  N+   +SS  ++    + +L F    +   LK+   ++   VA IL   L++IP 
Sbjct: 93  -RGQHNQGKGYSSLTSTQKPRQLMLKFEADRMLVFLKDWSNIRITAVAAILVSILMIIPP 151

Query: 135 ADAVDALKTCACLLKECRLELXXXXXXXXXXXXXXXLQTCNNRPDETECQIKCGDLFENN 194
           ADAVDALKTCACLLK+CR+EL               LQTCNNRPDETECQIKCGDLFEN+
Sbjct: 152 ADAVDALKTCACLLKDCRIELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENS 211

Query: 195 VVDEFNECAVSRKKCVPKKSDVGEFPVPDPAVLVKSFNIADFSGKWFITSGLNPTFDTFD 254
           VVDEFNECAVSRKKCVPKKSDVGEFP P+P VLV SFNIADFSGKWFITSGLNPTFDTFD
Sbjct: 212 VVDEFNECAVSRKKCVPKKSDVGEFPAPNPDVLVNSFNIADFSGKWFITSGLNPTFDTFD 271

Query: 255 CQLHDFHRESNRLVGNLSWRIRTPDGGFFTRSTVQKFVQDPLQPGILYNHDNEYLHYQDD 314
           CQLH+FH ESN+LVGNLSWRIRTPD GF TRS  Q+FVQDP  PGILYNHDNEYLHYQDD
Sbjct: 272 CQLHEFHTESNKLVGNLSWRIRTPDAGFITRSAEQRFVQDPSYPGILYNHDNEYLHYQDD 331

Query: 315 WYILSSKLENSENDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIIPELETAAKKVGRD 374
           WYILSSK+EN  +DY+FVYYRGRNDAWDGYGGAV+YTRSAVLPESI+PELE AAK VGRD
Sbjct: 332 WYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVIYTRSAVLPESIVPELEKAAKSVGRD 391

Query: 375 FNKFIITDNTCGPEPPLAERIEKTVEEGEKTIIREVEEIEGNVEKVGKTEMALFQRLAEG 434
           F+ FI TDNTCGPEP L ER+EK VEEGE+TI+REVE++E  VEKVGKTE  LFQ+LAEG
Sbjct: 392 FSTFIRTDNTCGPEPSLVERLEKKVEEGEETIVREVEQLEEEVEKVGKTEATLFQKLAEG 451

Query: 435 FKELQQDEEFFVRELSKEEMDILNDLKMEAGEVEKLFGEALPLRKLR 481
           FK  Q+DEE F+R LSKEEM+IL+ LKMEAGEVEKLFG ALP+RKLR
Sbjct: 452 FKVFQEDEENFLRGLSKEEMEILDGLKMEAGEVEKLFGRALPIRKLR 498