Jatropha Genome Database

JcCB0006821.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0006821.30 + phase: 0 
         (362 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09330.1                                                       387   e-107
Glyma08g17160.1                                                       151   1e-36
Glyma18g41220.1                                                        71   2e-12
Glyma15g28360.1                                                        56   6e-08

>Glyma17g09330.1 
          Length = 317

 Score =  387 bits (994), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/282 (65%), Positives = 228/282 (80%), Gaps = 2/282 (0%)

Query: 80  TSVQPNSRNKTRRQEDGIPTEDIQIIAKFKSRYNYIRVLEVSRKVDHPLAGSRLLLLDDP 139
           +S+    + + + QEDGIP ++++I+AKFKSR+NYIRVLEVSRK +HP  GSRLLLLD P
Sbjct: 37  SSLTAKCQQQQKTQEDGIPADEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDTP 96

Query: 140 GNIHSISFSHKLLTNTYFDVFATLPPILPPGPVAILGFGAGSAARLILELYQNGRVHGWE 199
           GNIHSISF  K LTNTYFDVFATLPPI+PPGP+A+LGFGAG+AARL+L  + +  +H WE
Sbjct: 97  GNIHSISFLFKSLTNTYFDVFATLPPIVPPGPLALLGFGAGTAARLLLLHHPSALLHCWE 156

Query: 200 LDPSVIAVGRKYFGLERLERDFSDRLFIYIGNALSLESYVRDGFSGILVDLFSKGSVIPE 259
           LDP+VI V R+YF L RLERD  DRLFIY+G+AL+  + V +GFSGI+VDLFSKGS+IPE
Sbjct: 157 LDPAVIQVAREYFNLARLERDNQDRLFIYVGDALN--ATVPNGFSGIVVDLFSKGSLIPE 214

Query: 260 LQDPNTWEEFTRCLRKGGRIMVNVGGRCVEAEDKRRDGAVVMQDTLKAMHQVFGDNLFVL 319
           LQDP TW      LRKGGRIMVNVGG CVEAE++ RDG VVM++TL AM +VFG  +FVL
Sbjct: 215 LQDPATWRMLRGRLRKGGRIMVNVGGSCVEAENRLRDGKVVMEETLGAMKEVFGKKVFVL 274

Query: 320 SLGSQNDDSTIALTGELPDLDAWKSVVPRSLRFYMDMWTPYS 361
           SLG++ DDS++ALTG+LP L+ WK+ +P   + Y DMWTPYS
Sbjct: 275 SLGNRKDDSSLALTGDLPHLEEWKNRLPGPFKCYADMWTPYS 316


>Glyma08g17160.1 
          Length = 334

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 171/336 (50%), Gaps = 46/336 (13%)

Query: 52  NPTNPVQSSPKTKISIQSNPKSKTLQTETSVQPNSRNKTRRQEDGIPTEDIQIIAKFKSR 111
           + T+ + S+PK  + + ++  SK+     S   +++ + ++Q +    E+ Q++   K+ 
Sbjct: 5   DSTHSLSSTPKHPLFLSTHHHSKS-NAHFSFSVSAQQQQQQQVEADEEENFQVLTALKTD 63

Query: 112 YNYIRVLEVSRKVDHPLAGSRLLLLDDPGNIHSISFSH--------KLLTNTYF------ 157
           YN I +++  +        SR+LLLD      SI F+          +LT   F      
Sbjct: 64  YNDILIVDTPK--------SRMLLLDSSCTPFSIVFTAFFTRNKNGLVLTGCVFYSDFVF 115

Query: 158 -------------DVFATLPPILPPGPVAILGFGAGSAARLILELYQNGRVHGWELDPSV 204
                        D FA+LP I+P GP+AILG G G+AA L+L+L+ + ++ GWE+D  +
Sbjct: 116 FFFFITVWTCVLCDEFASLPVIVPKGPIAILGLGGGTAAHLMLDLWPSLQLDGWEIDQIL 175

Query: 205 IAVGRKYFGLERLER--DFSDRLFIYIGNALSLESYVRDGFSGILVDLFSKGSVIPELQD 262
           I   R YFGL  LE+  D    L ++IG+           ++GI+VDLFS G V+P+LQ+
Sbjct: 176 IDKARDYFGLSDLEKTTDNGGVLNVHIGDVFITSEDFHQRYAGIIVDLFSDGKVLPQLQE 235

Query: 263 PNTWEEFTRCLRKGGRIMVNVGG-----RCVEA---EDKRRDGAVVMQDTLKAMHQVFGD 314
            +TW E    L   GR MVN GG       V+    ++   D + ++   L+A+ + F  
Sbjct: 236 VSTWLELHERLMANGRFMVNCGGVGGGPSAVDGSTDQETSSDESWLLNPALQALSKAFPG 295

Query: 315 NLFVLSLGSQNDDSTIALTGELPDLDAWKSVVPRSL 350
            +    +  +N ++ +ALTG LPDLD+W + VP  L
Sbjct: 296 QVSWKRMPKENGENFMALTGPLPDLDSWSASVPSPL 331


>Glyma18g41220.1 
          Length = 78

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 13/91 (14%)

Query: 199 ELDPSVIAVGRKYFGLERLERDFSDRLFIYIGNALSLESYVRDGFSGILVDLFSKGSVIP 258
           ELDP++I V R+YF L  L      R+  YIG+A++  + + +GFSGI+VDLF KGS+  
Sbjct: 1   ELDPTIIKVAREYFNLSTLR---GTRI-AYIGDAVN--AIIPNGFSGIVVDLFLKGSL-- 52

Query: 259 ELQDPNTWEEFTRCLRKGGRIMVNVGGRCVE 289
                +        LRKGGRI+VNVGG CVE
Sbjct: 53  -----SLSSRLRGRLRKGGRIIVNVGGSCVE 78


>Glyma15g28360.1 
          Length = 526

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 8/49 (16%)

Query: 162 TLPPILPPGPVAILGFGAGSAARLILELYQNGRVHGWELDPSVIAVGRK 210
             PPI+PP P+A+LGF A + ARL+L        H WELDP+VI V R+
Sbjct: 3   AFPPIVPPDPLALLGFSANTTARLLL--------HCWELDPAVIQVARE 43