Jatropha Genome Database

JcCB0006421.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0006421.30 + phase: 0 /partial
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09860.1                                                       115   4e-26
Glyma04g02720.2                                                       113   1e-25
Glyma04g02720.1                                                       113   1e-25
Glyma06g02740.1                                                       112   2e-25
Glyma02g35850.1                                                       112   3e-25
Glyma10g09410.1                                                       106   2e-23
Glyma11g18400.1                                                        78   9e-15
Glyma02g35850.2                                                        71   1e-12

>Glyma12g09860.1 
          Length = 450

 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/141 (48%), Positives = 86/141 (60%), Gaps = 5/141 (3%)

Query: 97  KLAQLKQTNEKVNHEAQYGGQEPFAKHNKVPNHVLDPQSATRSKRINRAKVSKNGKLGIQ 156
           K   LK+ +E  + EA  G +          +    P S    K    ++++K  ++G Q
Sbjct: 51  KTPLLKRKSEVADFEADSGDRMTAGFTEAANSPFQTPVSGKTGKGGKSSRLTKGNRVGTQ 110

Query: 157 --GSNAESPNG--LNPATGCRYDSSLGLLTRKFVKLIQEDKDGTLDLNRTADVLEVVQKR 212
             GSN  SP G  L PA  CRYDSSLGLLT+KF+ LI++ +DG LDLN+ AD LE VQKR
Sbjct: 111 TPGSNIGSPAGSNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLE-VQKR 169

Query: 213 RIYDITNVLEGISLIEKTSKN 233
           RIYDITNVLEGI LIEK  KN
Sbjct: 170 RIYDITNVLEGIGLIEKKLKN 190


>Glyma04g02720.2 
          Length = 343

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 132 DPQSATRSKRINRAKVSKNGKLGIQGSNAESPNGLNPATGCRYDSSLGLLTRKFVKLIQE 191
           DP    R K+  + K S+N K       A+S N       CRYDSSLGLLT+KFV LIQ+
Sbjct: 36  DP--TIRGKQNGKPKGSRNAKSAAHRPYADSTNS-TAVNNCRYDSSLGLLTKKFVSLIQD 92

Query: 192 DKDGTLDLNRTADVLEVVQKRRIYDITNVLEGISLIEKTSKN 233
            KDGTLDLNRTA++LE VQKRRIYDITNVLEG+ LIEKTSKN
Sbjct: 93  AKDGTLDLNRTAEILE-VQKRRIYDITNVLEGVGLIEKTSKN 133


>Glyma04g02720.1 
          Length = 343

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 132 DPQSATRSKRINRAKVSKNGKLGIQGSNAESPNGLNPATGCRYDSSLGLLTRKFVKLIQE 191
           DP    R K+  + K S+N K       A+S N       CRYDSSLGLLT+KFV LIQ+
Sbjct: 36  DP--TIRGKQNGKPKGSRNAKSAAHRPYADSTNS-TAVNNCRYDSSLGLLTKKFVSLIQD 92

Query: 192 DKDGTLDLNRTADVLEVVQKRRIYDITNVLEGISLIEKTSKN 233
            KDGTLDLNRTA++LE VQKRRIYDITNVLEG+ LIEKTSKN
Sbjct: 93  AKDGTLDLNRTAEILE-VQKRRIYDITNVLEGVGLIEKTSKN 133


>Glyma06g02740.1 
          Length = 325

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/75 (77%), Positives = 65/75 (86%), Gaps = 4/75 (5%)

Query: 159 NAESPNGLNPATGCRYDSSLGLLTRKFVKLIQEDKDGTLDLNRTADVLEVVQKRRIYDIT 218
           NA+S N +N    CRYDSSLGLLT+KFV LIQ+ KDGTLDLNRTA++LE VQKRRIYDIT
Sbjct: 64  NAKSANAVN---NCRYDSSLGLLTKKFVSLIQDAKDGTLDLNRTAEILE-VQKRRIYDIT 119

Query: 219 NVLEGISLIEKTSKN 233
           NVLEG+ LIEKTSKN
Sbjct: 120 NVLEGVGLIEKTSKN 134


>Glyma02g35850.1 
          Length = 468

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 4/103 (3%)

Query: 133 PQSATRSKRINRAKVSKNGKLG--IQGSNAESPNGLNPATGCRYDSSLGLLTRKFVKLIQ 190
           P SA +  R  +AK SK G+       SNA SP+ L PA+ CRYDSSLGLLT+KF+ L++
Sbjct: 107 PVSA-KGGRAQKAKASKEGRSCPPTPMSNAGSPSPLTPASSCRYDSSLGLLTKKFINLVK 165

Query: 191 EDKDGTLDLNRTADVLEVVQKRRIYDITNVLEGISLIEKTSKN 233
             +DG LDLN+ A+ LE VQKRRIYDITNVLEGI LIEK  KN
Sbjct: 166 HAEDGILDLNKAAETLE-VQKRRIYDITNVLEGIGLIEKKLKN 207


>Glyma10g09410.1 
          Length = 466

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 3/102 (2%)

Query: 133 PQSATRSKRINRAKVSKNGKLG-IQGSNAESPNGLNPATGCRYDSSLGLLTRKFVKLIQE 191
           P SA +  R  +AK SK         SNA SP+ L PA+ CRYDSSLGLLT+KF+ L++ 
Sbjct: 108 PVSA-KGGRTQKAKASKGRSCPPTPISNAGSPSPLTPASSCRYDSSLGLLTKKFINLVKH 166

Query: 192 DKDGTLDLNRTADVLEVVQKRRIYDITNVLEGISLIEKTSKN 233
            + G LDLN+ A+ LE VQKRRIYDITNVLEGI LIEK  KN
Sbjct: 167 AEGGILDLNKAAETLE-VQKRRIYDITNVLEGIGLIEKKLKN 207


>Glyma11g18400.1 
          Length = 296

 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 1/54 (1%)

Query: 180 LLTRKFVKLIQEDKDGTLDLNRTADVLEVVQKRRIYDITNVLEGISLIEKTSKN 233
           LLT+KF+ LI++ +DG LDLN+ AD LEV QKRRIYDITNVLEGI LIEK  KN
Sbjct: 1   LLTKKFINLIKQAEDGILDLNKAADTLEV-QKRRIYDITNVLEGIGLIEKKLKN 53


>Glyma02g35850.2 
          Length = 421

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 42/53 (79%), Gaps = 1/53 (1%)

Query: 181 LTRKFVKLIQEDKDGTLDLNRTADVLEVVQKRRIYDITNVLEGISLIEKTSKN 233
           +T+ F+ L++  +DG LDLN+ A+ LEV QKRRIYDITNVLEGI LIEK  KN
Sbjct: 114 MTKSFINLVKHAEDGILDLNKAAETLEV-QKRRIYDITNVLEGIGLIEKKLKN 165