Jatropha Genome Database

JcCB0006421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0006421.20 + phase: 0 
         (427 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g37700.1                                                       536   e-152
Glyma14g40460.1                                                       476   e-134
Glyma14g40460.2                                                       399   e-111

>Glyma17g37700.1 
          Length = 457

 Score =  536 bits (1380), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 274/432 (63%), Positives = 326/432 (75%), Gaps = 29/432 (6%)

Query: 15  RVTWEGCSVLLDINDGDRLVFSRLTPGSNLKIGNKNLSLRPLIGCPFGSLFQIENGKEGP 74
           RVTWEGCSVLLDINDGDRLVF+RL+P   LKIGNKN SL+PLIGCPFG++FQ++    GP
Sbjct: 8   RVTWEGCSVLLDINDGDRLVFARLSPAGKLKIGNKNCSLQPLIGCPFGTVFQVD----GP 63

Query: 75  CLSRFIPSKQADLYNACYL---------------GNNAEEKSDCEMIDESRDNRALIDNN 119
               F+   Q +  NA  +                NN EE  D     +SRDNRAL+DNN
Sbjct: 64  ----FLSPAQVNGNNAEEVRDGQVSVESRDKVNNDNNPEEVRDGRANVDSRDNRALVDNN 119

Query: 120 KAQSLTGDDIDAMRRQGAKGEEIIDALIANSATFEKKTLFSQEKYRLKKQKKYAPRVLLR 179
            AQSLTG+DI+AMRRQGA G EII+ALIANSATFEKKT FSQEKYRLKKQKKYAP+VL+R
Sbjct: 120 TAQSLTGEDIEAMRRQGAGGNEIIEALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLMR 179

Query: 180 RPFTRSICETYFKKYPARIGYLRIDALSLLLSMANVTANSDILVMDMVGGLLTGAVAERL 239
           RP  RSICE YFKKYP++IG+LR+D LSLLLSM NV++NSDILV+DMVGGLLTGAVAERL
Sbjct: 180 RPVARSICEAYFKKYPSKIGFLRVDTLSLLLSMGNVSSNSDILVVDMVGGLLTGAVAERL 239

Query: 240 GGTGYVCSTYLGDTPHSVDIVRMFNFNNDICKRIVRASLSDLCLAQNETSNQSCAHEDA- 298
           GGTG+VC++Y+G  P+S+DIVR+FN +++ICKRIVR+ +SDL L+Q E+  Q+   +DA 
Sbjct: 240 GGTGFVCNSYIGQAPYSMDIVRIFNLSDEICKRIVRSPISDL-LSQKESPEQTLQPDDAC 298

Query: 299 --PMESNGQTXXXXXXXXXXXXXPEA-ADIDPDPTASPASKISKVHKAGERATDEALKLW 355
               +S  Q                  +D+  + T  PA ++ K  KAGERA  E + LW
Sbjct: 299 NVESQSKDQISASTSMEDISHSSENGISDLGAENT-EPAKEVWKAPKAGERAQKEIIDLW 357

Query: 356 KENGFSSLIIAAPDLDPWSLVNEILPLLSYSAPFAIYHQYLQPLATCMHNLQLGKMAIGL 415
           KENGFSSLIIAAP+LD W+LV +ILPLL+ SAPFAIYHQYLQPLATCMHNLQL KMAIGL
Sbjct: 358 KENGFSSLIIAAPELDTWTLVRDILPLLADSAPFAIYHQYLQPLATCMHNLQLEKMAIGL 417

Query: 416 QISEPWLREYQV 427
           QI+EPWLREYQV
Sbjct: 418 QITEPWLREYQV 429


>Glyma14g40460.1 
          Length = 459

 Score =  476 bits (1226), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/448 (57%), Positives = 306/448 (68%), Gaps = 57/448 (12%)

Query: 15  RVTWEGCSVLLDINDGDRLVFSRLTPGSNLKIGNKNLSLRPLIGCPFGSLFQIENGKEGP 74
           RVTWEGCSVLLDINDGDRLVF+RL+P + LKIGNKN SL+PLIG PFG+ FQ      GP
Sbjct: 7   RVTWEGCSVLLDINDGDRLVFARLSPSAKLKIGNKNCSLQPLIGRPFGTAFQ------GP 60

Query: 75  -CLSRFIPSKQADLYNACYL----------GNNAEEKSDCEM------------------ 105
            C    +      +Y   +L          GNNAEE  D ++                  
Sbjct: 61  ICYCITLLGTNLAIYLCLFLRCLSICDLVNGNNAEELRDVQVSVKSRDKVEDNYPEEERD 120

Query: 106 ----IDESRDNRALIDNNKAQSLTGDDIDAMRRQGAKGEEIIDALIANSATFEKKTLFSQ 161
               +D SRDNR L+DNN AQ LTG+DI+AMRRQGA G EII+ALIANS TFEKKT FSQ
Sbjct: 121 VQANVD-SRDNRELVDNNTAQRLTGEDIEAMRRQGAGGNEIIEALIANSVTFEKKTSFSQ 179

Query: 162 EKYRLKKQKKYAPRVLLRRPFTRSICETYFKKYPARIGYLRIDALSLLLSMANVTANSDI 221
           EKYRLKKQKKYAP+VL+RRP  R               +LR+D LSLLLSM NV++NSDI
Sbjct: 180 EKYRLKKQKKYAPKVLMRRPVARR--------------FLRVDTLSLLLSMGNVSSNSDI 225

Query: 222 LVMDMVGGLLTGAVAERLGGTGYVCSTYLGDTPHSVDIVRMFNFNNDICKRIVRASLSDL 281
           LV+DM+GGLLTGAVAERLGGTG+VC++Y G  P+S+DIVR+FN +++ICKRIVR+ +SDL
Sbjct: 226 LVVDMIGGLLTGAVAERLGGTGFVCNSYSGQAPYSMDIVRIFNLSDEICKRIVRSPISDL 285

Query: 282 CLAQNETSNQSCAHEDA-PMESNGQTXXXXXXXXXXXXXP-EAADIDPDPTASPASKISK 339
            L+Q E   Q+  H+DA  +ES                   E    D     +  +K+ K
Sbjct: 286 -LSQKELPEQTLQHDDACNVESRSTDQMSASTSMEDNSHSLENGISDLGAENTEPAKVRK 344

Query: 340 VHKAGERATDEALKLWKENGFSSLIIAAPDLDPWSLVNEILPLLSYSAPFAIYHQYLQPL 399
             KAGERA  E + LWKENGFSSLIIAAP+LD W+LV ++LPLL+ SAPFAIYHQYLQPL
Sbjct: 345 APKAGERAHKEIIDLWKENGFSSLIIAAPELDTWALVRDVLPLLANSAPFAIYHQYLQPL 404

Query: 400 ATCMHNLQLGKMAIGLQISEPWLREYQV 427
           ATCMHNLQL KMAIGLQI+EPWLREYQV
Sbjct: 405 ATCMHNLQLEKMAIGLQITEPWLREYQV 432


>Glyma14g40460.2 
          Length = 332

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/308 (63%), Positives = 240/308 (77%), Gaps = 7/308 (2%)

Query: 124 LTGDDIDAMRRQGAKGEEIIDALIANSATFEKKTLFSQEKYRLKKQKKYAPRVLLRRPFT 183
           ++ +D  A+  QGA G EII+ALIANS TFEKKT FSQEKYRLKKQKKYAP+VL+RRP  
Sbjct: 1   MSSEDFYALFWQGAGGNEIIEALIANSVTFEKKTSFSQEKYRLKKQKKYAPKVLMRRPVA 60

Query: 184 RSICETYFKKYPARIGYLRIDALSLLLSMANVTANSDILVMDMVGGLLTGAVAERLGGTG 243
           RSICE YFKKYP++IG+LR+D LSLLLSM NV++NSDILV+DM+GGLLTGAVAERLGGTG
Sbjct: 61  RSICEAYFKKYPSKIGFLRVDTLSLLLSMGNVSSNSDILVVDMIGGLLTGAVAERLGGTG 120

Query: 244 YVCSTYLGDTPHSVDIVRMFNFNNDICKRIVRASLSDLCLAQNETSNQSCAHEDA----P 299
           +VC++Y G  P+S+DIVR+FN +++ICKRIVR+ +SDL L+Q E   Q+  H+DA     
Sbjct: 121 FVCNSYSGQAPYSMDIVRIFNLSDEICKRIVRSPISDL-LSQKELPEQTLQHDDACNVES 179

Query: 300 MESNGQTXXXXXXXXXXXXXPEAADIDPDPTASPASKISKVHKAGERATDEALKLWKENG 359
             ++  +                +D+  + T  PA K+ K  KAGERA  E + LWKENG
Sbjct: 180 RSTDQMSASTSMEDNSHSLENGISDLGAENT-EPA-KVRKAPKAGERAHKEIIDLWKENG 237

Query: 360 FSSLIIAAPDLDPWSLVNEILPLLSYSAPFAIYHQYLQPLATCMHNLQLGKMAIGLQISE 419
           FSSLIIAAP+LD W+LV ++LPLL+ SAPFAIYHQYLQPLATCMHNLQL KMAIGLQI+E
Sbjct: 238 FSSLIIAAPELDTWALVRDVLPLLANSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITE 297

Query: 420 PWLREYQV 427
           PWLREYQV
Sbjct: 298 PWLREYQV 305