Jatropha Genome Database

JcCB0005881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0005881.10 - phase: 0 
         (429 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g11890.1                                                       740   0.0  
Glyma09g30320.1                                                       738   0.0  
Glyma20g23670.1                                                        52   2e-06
Glyma10g43220.1                                                        51   3e-06

>Glyma07g11890.1 
          Length = 424

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/429 (82%), Positives = 385/429 (89%), Gaps = 5/429 (1%)

Query: 1   MASLSFTQIRGRHSLAEFAAVRTRQTSLTNQRLRNRIGSLRVVADAGAKGEPDLSVTVNG 60
           MASLS  QIR  +  + F      +  +   R+       +V A      EPDLSVTVNG
Sbjct: 1   MASLSMIQIRTGNCASGFGLNCAGKVKVGPSRV-----GFKVFASETQATEPDLSVTVNG 55

Query: 61  LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRAGANG 120
           L+MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLRAGANG
Sbjct: 56  LRMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANG 115

Query: 121 SAKGQIIGWENIELISDRPLETMLSEFKRLKEEYPERILIASIMEEYDKAAWEELIDRVE 180
           SAKG+IIGWENIELISDRPLETML EFK+LKEEYP+RILIASIMEEY+KAAWEELIDRVE
Sbjct: 116 SAKGEIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 175

Query: 181 QTGIDAIEVNFSCPHGMPERKMGAAVGQDCVLLEEVCGWVNAKATVPVWAKMTPNITDIT 240
           QTG+DA E+NFSCPHGMPERKMGAAVGQDC LLEEVCGW+NAKAT+PVWAKMTPNITDI+
Sbjct: 176 QTGVDAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIS 235

Query: 241 QPARVALSSGCEGVAAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVM 300
           QPAR+ALSSGCEGV+AINTIMSVMGINL TLRPEPCVEGYSTPGGYS++AVHPIALGKVM
Sbjct: 236 QPARIALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSARAVHPIALGKVM 295

Query: 301 NIAKMMKSEFNLEQYSLSGIGGVETGNDAAEFILLGASTVQVCTGVMMHGYGLVKKLCEE 360
           +IAKMMKSEF+ E Y+LS IGGVETG DAAEFILLGA+TVQVCTGVMMHGYGLVKKLC E
Sbjct: 296 SIAKMMKSEFDSENYTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCLE 355

Query: 361 LKDFMKMHNFSSIEDFRGASLDYFTTHTDLVRRQKEAIELRKAVKKGLQSDKDWTGDGFV 420
           L+DFMK HNF+SIEDFRG SL+YFTTHTDLVRRQKEA++ RKA+KKGLQSDKDWTGDGFV
Sbjct: 356 LQDFMKKHNFTSIEDFRGVSLEYFTTHTDLVRRQKEAVQKRKAIKKGLQSDKDWTGDGFV 415

Query: 421 KETESMVSN 429
           +ETESMVSN
Sbjct: 416 QETESMVSN 424


>Glyma09g30320.1 
          Length = 424

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/429 (82%), Positives = 383/429 (89%), Gaps = 5/429 (1%)

Query: 1   MASLSFTQIRGRHSLAEFAAVRTRQTSLTNQRLRNRIGSLRVVADAGAKGEPDLSVTVNG 60
           MASLS TQIR  +  + F      +  +   R+       +V A      EPDLSVTVNG
Sbjct: 1   MASLSMTQIRTGNCASGFGLNCAGKVKVGPSRV-----GFKVFASETQATEPDLSVTVNG 55

Query: 61  LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRAGANG 120
           L MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLRAGA+ 
Sbjct: 56  LHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGADR 115

Query: 121 SAKGQIIGWENIELISDRPLETMLSEFKRLKEEYPERILIASIMEEYDKAAWEELIDRVE 180
           SAKG+IIGWENIELISDRPLE ML EFK+LKEEYP+RILIASIMEEY+KAAWEELIDRVE
Sbjct: 116 SAKGEIIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 175

Query: 181 QTGIDAIEVNFSCPHGMPERKMGAAVGQDCVLLEEVCGWVNAKATVPVWAKMTPNITDIT 240
           QTG+DA E+NFSCPHGMPERKMGAAVGQDC LLEEVCGW+NAKAT+PVWAKMTPNITDI+
Sbjct: 176 QTGVDAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIS 235

Query: 241 QPARVALSSGCEGVAAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVM 300
           QPARVALSSGCEGV+AINTIMSVMGINL TLRPEPCVEGYSTPGGYS+KAVHPIALGKVM
Sbjct: 236 QPARVALSSGCEGVSAINTIMSVMGINLDTLRPEPCVEGYSTPGGYSAKAVHPIALGKVM 295

Query: 301 NIAKMMKSEFNLEQYSLSGIGGVETGNDAAEFILLGASTVQVCTGVMMHGYGLVKKLCEE 360
           +IAKMMKSEF+ E Y+LS IGGVETG DAAEFILLGA+TVQVCTGVMMHGYGLVKKLC E
Sbjct: 296 SIAKMMKSEFDSENYTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCLE 355

Query: 361 LKDFMKMHNFSSIEDFRGASLDYFTTHTDLVRRQKEAIELRKAVKKGLQSDKDWTGDGFV 420
           L+DFMK HNF+SIEDFRG SL+YFTTHTDLVRRQKEA++ RKA+KKGLQSDKDWTGDGFV
Sbjct: 356 LQDFMKKHNFTSIEDFRGVSLEYFTTHTDLVRRQKEAVQKRKAIKKGLQSDKDWTGDGFV 415

Query: 421 KETESMVSN 429
           +ETESMVSN
Sbjct: 416 QETESMVSN 424


>Glyma20g23670.1 
          Length = 455

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 227 PVWAKMTPNIT--DITQPARVALSSGCEGVAAINTIMSVMGINLKTLRPEPCVEG--YST 282
           P+  K+ P+++  D+   A VAL+   +G+   NT +S         RP+P  +    S 
Sbjct: 310 PLLVKIAPDLSKEDLEDIAAVALTLHLDGLIISNTTIS---------RPDPASKNPLASE 360

Query: 283 PGGYSSKAVHPIALGKVMNIAKMMKSEFNLEQYSLSGIGGVETGNDAAEFILLGASTVQV 342
            GG S K +  ++     NI K M       +  L G GG+ +G DA + I  GA+ VQ+
Sbjct: 361 TGGLSGKPLFNLS----TNILKEMYI-LTRGRIPLIGCGGISSGEDAYKKIRAGATLVQL 415

Query: 343 CTGVMMHGYGLVKKLCEELKDFMKMHNFSSIEDFRGA 379
            T     G  L+ ++  EL   ++   F SI D  GA
Sbjct: 416 YTAFAYGGPALIPQIKAELASCLERDGFKSIVDAVGA 452


>Glyma10g43220.1 
          Length = 455

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 227 PVWAKMTPNIT--DITQPARVALSSGCEGVAAINTIMSVMGINLKTLRPEPCVEG--YST 282
           P+  K+ P+++  D+   A VAL+   +G+   NT +S         RP+P  +    S 
Sbjct: 310 PLLVKIAPDLSKEDLEDIAAVALALHLDGLIISNTTIS---------RPDPTSKNPLASE 360

Query: 283 PGGYSSKAVHPIALGKVMNIAKMMKSEFNLEQYSLSGIGGVETGNDAAEFILLGASTVQV 342
            GG S K +  ++     NI K M       +  L G GG+ +G DA + I  GA+ VQ+
Sbjct: 361 TGGLSGKPLFNLS----TNILKEMYI-LTRGRIPLIGCGGISSGEDAYKKIRAGATLVQL 415

Query: 343 CTGVMMHGYGLVKKLCEELKDFMKMHNFSSIEDFRGA 379
            T     G  L+ ++  EL   ++   F SI D  GA
Sbjct: 416 YTAFAYGGPALIPQIKAELAACLERDGFKSIVDAVGA 452