Jatropha Genome Database

JcCB0004891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004891.10 + phase: 0 
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09700.1                                                       116   2e-26
Glyma06g09800.1                                                       114   6e-26
Glyma19g37070.4                                                        55   7e-08
Glyma03g34390.1                                                        51   1e-06

>Glyma04g09700.1 
          Length = 208

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 106/191 (55%), Gaps = 23/191 (12%)

Query: 32  LGDITWVKLHGDSWWPAVVFGSNVSGDREIK----------GVRVRLIGSYEYMYVDPIK 81
           +GD+ +VKL G SWWP  V   N S ++ +K           + VR  GSY Y Y DPIK
Sbjct: 23  VGDVIFVKLRGSSWWPVQVVDEN-SVNKSVKPSKRTKRLPGDILVRHYGSYTYSYADPIK 81

Query: 82  CRSEFHITLEKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEGEKAISKASKQDGVK 141
           CR EF   LE+N+GS +++  + LEQD+  + S R KG  +K K        +SK    K
Sbjct: 82  CRDEFKRILERNDGSLKKVLLQTLEQDLPSTKSRRSKGSSSKPK------GTSSKDAAGK 135

Query: 142 RKLKLDSLNPEKNTKRKTSNRDGMQKKLKQKSSSTDAASPGRSQELSARRTKVMQTLGLI 201
           RK   +     KN +++T N D           S + +S G+S ELS+RR +VM+ LGL+
Sbjct: 136 RKSNWEDKEQNKNKQKETLNVD------DPACQSWETSSLGKSPELSSRRIRVMENLGLV 189

Query: 202 APSGSPFHQKD 212
           AP+GSPF +KD
Sbjct: 190 APAGSPFEKKD 200


>Glyma06g09800.1 
          Length = 206

 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 26/193 (13%)

Query: 32  LGDITWVKLHGDSWWPAVVFGSNVSGDREIK----------GVRVRLIGSYEYMYVDPIK 81
           +GD+ +VKL G SWWPA V   N S ++ +K           + VR  GSY Y Y DPIK
Sbjct: 24  VGDVIFVKLRGSSWWPAQVVDEN-SVNKSVKPSKRTKRLPGDILVRHYGSYTYSYADPIK 82

Query: 82  CRSEFHITLEKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEGEKAISKASKQDGVK 141
           CR EF   L++N+GS  ++  + LEQD+  + S R KG  +K K        +SK    K
Sbjct: 83  CRDEFKTILDRNDGSLRKVLLQTLEQDLPSTKSRRSKGSSSKPK------GTSSKNAAGK 136

Query: 142 RKLKLDSLNPEKN---TKRKTSNRDGMQKKLKQKSSSTDAASPGRSQELSARRTKVMQTL 198
           RK   +     KN    +++TSN D +       S S + +S G+S ELS+RR +VM+ L
Sbjct: 137 RKSNGEDKEQNKNKHEKQKETSNDDDLS------SQSRETSSLGKSPELSSRRVRVMENL 190

Query: 199 GLIAPSGSPFHQK 211
           GLIAP+GSPF ++
Sbjct: 191 GLIAPAGSPFPKR 203


>Glyma19g37070.4 
          Length = 329

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 11/178 (6%)

Query: 33  GDITWVKLHGDSWWPAVVF--GSNVSGDREIKGVRVRLIGSYEYMYVDPIKCRSEFHITL 90
           G++ W +  G  WWPA +    S +S       V V+  G+    ++DP+   S F  + 
Sbjct: 161 GNVVWARTDGQVWWPAEILEETSALSNPGSGGHVLVQFYGNLPSAWIDPMTDISTFEDSF 220

Query: 91  EKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEGEKAISKASKQDGVKRKLKLDSLN 150
           E  + +  E F++AL++ + +        K+T  +     + + S         K  S +
Sbjct: 221 EDKSNNPSEDFQQALKKALQRKAQLSSCQKLTLDRSAHSDMQERSSD-------KCTSTS 273

Query: 151 PEKNTKRKTSNRDGMQKKLKQKSSSTDAASPGRSQELSARRTKVMQTLGLIAPSGSPF 208
             K        R G +++ K K    +   P +S E   RR K+M+ LGL  P GSPF
Sbjct: 274 TSKTIDDVQEKRRGKRER-KPKVHFDEVTYPMKS-ERKVRRLKIMRYLGLAPPVGSPF 329


>Glyma03g34390.1 
          Length = 328

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 23/184 (12%)

Query: 33  GDITWVKLHGDSWWPAVVF--GSNVSGDREIKGVRVRLIGSYEYMYVDPIKCRSEFHITL 90
           G + W +     WWPA +    S +S       V V+  G+    ++DP+   S F  + 
Sbjct: 160 GSVVWARTDSQVWWPAEIMEETSVLSNPGNDGHVLVQFYGNLPSAWIDPMTDISTFEDSF 219

Query: 91  EKNNGSYEEIFRKALEQDISQSNSSRVKGKVTKSKEGEKAISKASKQDGVKRKLKLDSLN 150
           E  + +  E F+KAL+Q + +        K+T  +     + + S               
Sbjct: 220 EDRSNNPSEDFQKALKQALQRKAQLSSCQKLTPDRSAHYDLQERSS-------------- 265

Query: 151 PEKNTKRKTSNR-DGMQKKLKQKSSST-----DAASPGRSQELSARRTKVMQTLGLIAPS 204
            +K T   TS   D +Q++ + K         D  +     E   RR K+M+ LGL  P 
Sbjct: 266 -DKCTSTSTSKTIDDVQERRRGKRERKPKVHFDEVTYPMKSETKVRRLKIMRYLGLAPPV 324

Query: 205 GSPF 208
           GSPF
Sbjct: 325 GSPF 328