Jatropha Genome Database

JcCB0004221.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004221.20 + phase: 0 
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g42260.2                                                       154   1e-38
Glyma14g06630.1                                                       154   1e-38
Glyma02g42260.1                                                       154   2e-38
Glyma18g03300.1                                                       147   3e-36
Glyma11g35060.1                                                       145   7e-36
Glyma14g06620.2                                                       128   1e-30
Glyma14g06620.1                                                       128   1e-30
Glyma02g42270.1                                                       127   2e-30
Glyma18g03290.1                                                        91   3e-19

>Glyma02g42260.2 
          Length = 273

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 88/110 (80%)

Query: 1   MAIKPTKAQKKTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNT 60
           MA K TKA+KK  YD KLC L++EY QILVV +DNVGSNQLQ+IR+GLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIKLHAEKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKV 110
           MMKRS+++HAEKTGN+A+ +            FTKGDLKEV EE+AKYKV
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKV 110


>Glyma14g06630.1 
          Length = 319

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 88/110 (80%)

Query: 1   MAIKPTKAQKKTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNT 60
           MA K TKA+KK  YD KLC L++EY QILVV +DNVGSNQLQ+IR+GLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIKLHAEKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKV 110
           MMKRS+++HAEKTGN+A+ +            FTKGDLKEV EE+AKYKV
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKV 110


>Glyma02g42260.1 
          Length = 320

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 88/110 (80%)

Query: 1   MAIKPTKAQKKTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNT 60
           MA K TKA+KK  YD KLC L++EY QILVV +DNVGSNQLQ+IR+GLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIKLHAEKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKV 110
           MMKRS+++HAEKTGN+A+ +            FTKGDLKEV EE+AKYKV
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKV 110


>Glyma18g03300.1 
          Length = 317

 Score =  147 bits (371), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 84/110 (76%)

Query: 1   MAIKPTKAQKKTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNT 60
           MA K TKAQKK  YD KLC+LLD Y+QILVV ADNVGSNQLQ+IR GLRGDS++LMGKNT
Sbjct: 1   MARKLTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNT 60

Query: 61  MMKRSIKLHAEKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKV 110
           MMKR+IK+HA+ TGN    +            FTKGD+KEV+E ++KYKV
Sbjct: 61  MMKRTIKIHAQNTGNTTILNLIPLLVGNVGLIFTKGDVKEVKEVVSKYKV 110


>Glyma11g35060.1 
          Length = 320

 Score =  145 bits (367), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 84/110 (76%)

Query: 1   MAIKPTKAQKKTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNT 60
           MA K TKAQKK  YD KLC+LLD Y+QILVV ADNVGSNQLQ+IR GLRGDS++LMGKNT
Sbjct: 1   MARKLTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNT 60

Query: 61  MMKRSIKLHAEKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKV 110
           MMKRSIK+HA+ TG+    +            FTKGD+KEV+E ++KYKV
Sbjct: 61  MMKRSIKIHAQNTGDTTILNLIPLLVGNVGLIFTKGDVKEVKEVVSKYKV 110


>Glyma14g06620.2 
          Length = 187

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 75/101 (74%)

Query: 11  KTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNTMMKRSIKLHA 70
           K  YD K+ +LL EYSQ+LVV +DNVGSNQLQ IRRGL  DS+V+MGKN+MMKRSI L A
Sbjct: 7   KAAYDAKMLKLLKEYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKRSIILDA 66

Query: 71  EKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKVI 111
           +KTGN AF +            FTKGDL+EV E+IAKYKV+
Sbjct: 67  QKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVV 107


>Glyma14g06620.1 
          Length = 187

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 75/101 (74%)

Query: 11  KTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNTMMKRSIKLHA 70
           K  YD K+ +LL EYSQ+LVV +DNVGSNQLQ IRRGL  DS+V+MGKN+MMKRSI L A
Sbjct: 7   KAAYDAKMLKLLKEYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKRSIILDA 66

Query: 71  EKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKVI 111
           +KTGN AF +            FTKGDL+EV E+IAKYKV+
Sbjct: 67  QKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVV 107


>Glyma02g42270.1 
          Length = 187

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 75/101 (74%)

Query: 11  KTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNTMMKRSIKLHA 70
           K  YD K+ +LL EYSQ+LVV +DNVGSNQLQ IRRGL  DS+V+MGKN+MMKRSI L A
Sbjct: 7   KAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKRSIILDA 66

Query: 71  EKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKVI 111
           +KTGN AF +            FTKGDL+EV E+IAKYKV+
Sbjct: 67  KKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVV 107


>Glyma18g03290.1 
          Length = 275

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 19/114 (16%)

Query: 1   MAIKPTKAQKKTQYDQKLCRLLDEYSQILVVGADNVGSNQLQSIRRGLRGDSIVLMGKNT 60
           MA+ PTKA+KK  YD KLC+LL++Y+QILVV ADNVGSNQL++IR+ LRGDS+       
Sbjct: 1   MAVIPTKAEKKVSYDVKLCQLLEDYTQILVVAADNVGSNQLENIRKDLRGDSV------- 53

Query: 61  MMKRSIKLHAEKTGNDAFNSXXXXXXXXXXXXFTKGDLKEVREEIAKYKVICCS 114
               S + H ++T    ++                 +LKEV EE+A+YK++  +
Sbjct: 54  ---DSFRDHRQQTIPQPYSPSSGHNWC---------NLKEVSEEVARYKLVAPA 95