Jatropha Genome Database

JcCB0004021.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004021.20 - phase: 0 
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g03380.1                                                       278   4e-75
Glyma11g03380.2                                                       277   4e-75
Glyma12g11410.1                                                       164   9e-41
Glyma16g29590.2                                                       140   1e-33
Glyma16g29590.1                                                       140   1e-33
Glyma15g09590.2                                                       138   3e-33
Glyma15g09590.1                                                       138   3e-33
Glyma09g24100.1                                                       131   5e-31
Glyma15g09590.3                                                       119   3e-27
Glyma13g29460.1                                                       116   1e-26
Glyma11g25800.1                                                        53   2e-07

>Glyma11g03380.1 
          Length = 300

 Score =  278 bits (710), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 130/176 (73%), Positives = 153/176 (86%), Gaps = 2/176 (1%)

Query: 4   FLNLKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGN 63
            L L DSKEAVYGALDAWVAWE+ FPI S++  L++LEK+QQWHRVVQVIKWMLSKGQG 
Sbjct: 82  LLELNDSKEAVYGALDAWVAWEQNFPIASLKTILISLEKDQQWHRVVQVIKWMLSKGQGM 141

Query: 64  TMGTYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKL 123
           TMGTYGQLIRALDMDHR +EA  FW  KIG+DLHSVPW+LC LM+S+YYRNNML+ LVKL
Sbjct: 142 TMGTYGQLIRALDMDHRVEEAQKFWEIKIGSDLHSVPWQLCHLMISVYYRNNMLQDLVKL 201

Query: 124 FKGLEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQKYIHLFSETHKGDNKKFR 179
           FKGLEAFDRKP +KSI+QKVANAYE+LG+++EK+RV +KY HLF+ET  G  K+ +
Sbjct: 202 FKGLEAFDRKPRDKSIIQKVANAYEVLGLVKEKERVLEKYNHLFTET--GPTKRHK 255


>Glyma11g03380.2 
          Length = 288

 Score =  277 bits (709), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 128/167 (76%), Positives = 149/167 (89%)

Query: 4   FLNLKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGN 63
            L L DSKEAVYGALDAWVAWE+ FPI S++  L++LEK+QQWHRVVQVIKWMLSKGQG 
Sbjct: 70  LLELNDSKEAVYGALDAWVAWEQNFPIASLKTILISLEKDQQWHRVVQVIKWMLSKGQGM 129

Query: 64  TMGTYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKL 123
           TMGTYGQLIRALDMDHR +EA  FW  KIG+DLHSVPW+LC LM+S+YYRNNML+ LVKL
Sbjct: 130 TMGTYGQLIRALDMDHRVEEAQKFWEIKIGSDLHSVPWQLCHLMISVYYRNNMLQDLVKL 189

Query: 124 FKGLEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQKYIHLFSET 170
           FKGLEAFDRKP +KSI+QKVANAYE+LG+++EK+RV +KY HLF+ET
Sbjct: 190 FKGLEAFDRKPRDKSIIQKVANAYEVLGLVKEKERVLEKYNHLFTET 236


>Glyma12g11410.1 
          Length = 131

 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 76/116 (65%), Positives = 92/116 (79%), Gaps = 4/116 (3%)

Query: 8   KDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTMGT 67
           KD  + +Y      V WE+ FPI S++  L++LEK+QQWHRV+QVIKWMLSKGQG TMGT
Sbjct: 8   KDKNKYLYAT----VVWEQNFPIASLKTILISLEKDQQWHRVMQVIKWMLSKGQGMTMGT 63

Query: 68  YGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKL 123
           YGQLIRAL++DHR  EA  FW  KIG+DLH VPW+LC LM+S+YYRNNML+ LVKL
Sbjct: 64  YGQLIRALNIDHRVKEAQKFWEIKIGSDLHLVPWQLCHLMISVYYRNNMLQDLVKL 119


>Glyma16g29590.2 
          Length = 343

 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 106/163 (65%), Gaps = 1/163 (0%)

Query: 1   MNMFLNLKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKG 60
           +N    L + KE VYGALD++VAWE +FP+ ++++AL TLE EQ+W RV+QV KWMLSKG
Sbjct: 59  VNSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKG 118

Query: 61  QGNTMGTYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECL 120
           QG TMG+Y  L+ AL  D R DEA   W+K +   + S+P      M+SIY++  M E +
Sbjct: 119 QGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKM 178

Query: 121 VKLFKGLEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQKY 163
            ++F  +E    + P  ++V  + +A++ LGML++  ++  KY
Sbjct: 179 FEIFADMEELCLR-PNIAVVSMIGDAFKELGMLDKYQKLHAKY 220


>Glyma16g29590.1 
          Length = 343

 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 106/163 (65%), Gaps = 1/163 (0%)

Query: 1   MNMFLNLKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKG 60
           +N    L + KE VYGALD++VAWE +FP+ ++++AL TLE EQ+W RV+QV KWMLSKG
Sbjct: 59  VNSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKG 118

Query: 61  QGNTMGTYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECL 120
           QG TMG+Y  L+ AL  D R DEA   W+K +   + S+P      M+SIY++  M E +
Sbjct: 119 QGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKM 178

Query: 121 VKLFKGLEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQKY 163
            ++F  +E    + P  ++V  + +A++ LGML++  ++  KY
Sbjct: 179 FEIFADMEELCLR-PNIAVVSMIGDAFKELGMLDKYQKLHAKY 220


>Glyma15g09590.2 
          Length = 288

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 7/169 (4%)

Query: 7   LKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTMG 66
           L + KEAVYGALD W AWE +FP+ ++ +AL  L K   W RV+QV KWMLSKGQG TMG
Sbjct: 105 LPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMG 164

Query: 67  TYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKLFKG 126
           TY  L+ A DMD R DEA   W+  I   + SV   L   M+S+Y  +NM + ++ +F  
Sbjct: 165 TYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSKRLFSRMISLYDHHNMPDKIIDVFAD 224

Query: 127 LEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQ------KYIHLFSE 169
           +E    KP E + V++VA A+  LG  E++  V +      KYIH   E
Sbjct: 225 MEELRLKPDEDT-VRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGE 272


>Glyma15g09590.1 
          Length = 288

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 7/169 (4%)

Query: 7   LKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTMG 66
           L + KEAVYGALD W AWE +FP+ ++ +AL  L K   W RV+QV KWMLSKGQG TMG
Sbjct: 105 LPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMG 164

Query: 67  TYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKLFKG 126
           TY  L+ A DMD R DEA   W+  I   + SV   L   M+S+Y  +NM + ++ +F  
Sbjct: 165 TYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSKRLFSRMISLYDHHNMPDKIIDVFAD 224

Query: 127 LEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQ------KYIHLFSE 169
           +E    KP E + V++VA A+  LG  E++  V +      KYIH   E
Sbjct: 225 MEELRLKPDEDT-VRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGE 272


>Glyma09g24100.1 
          Length = 343

 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 1/157 (0%)

Query: 7   LKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTMG 66
           L + KE VYGALD++VAWE +FP+ ++++AL TLE EQ W RV+Q+ KWMLSKGQG TMG
Sbjct: 65  LSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQDWKRVIQITKWMLSKGQGKTMG 124

Query: 67  TYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKLFKG 126
           +Y  L+ AL  D R DEA   W+K +   + S+P      M+SIY++  M E + ++F  
Sbjct: 125 SYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFAD 184

Query: 127 LEAFDRKPPEKSIVQKVANAYEMLGMLEEKDRVEQKY 163
           +E    + P   +V  + +A++  GML++  ++  KY
Sbjct: 185 MEELCLR-PNIVVVSMIGDAFKERGMLDKYLKLHAKY 220


>Glyma15g09590.3 
          Length = 247

 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/117 (49%), Positives = 75/117 (64%)

Query: 7   LKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTMG 66
           L + KEAVYGALD W AWE +FP+ ++ +AL  L K   W RV+QV KWMLSKGQG TMG
Sbjct: 105 LPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRKRGHWVRVIQVAKWMLSKGQGATMG 164

Query: 67  TYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKL 123
           TY  L+ A DMD R DEA   W+  I   + SV   L   M+S+Y  +NM + ++ +
Sbjct: 165 TYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSKRLFSRMISLYDHHNMPDKIIDV 221


>Glyma13g29460.1 
          Length = 264

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 20/169 (11%)

Query: 7   LKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTMG 66
           L + KEAVYGALD W AWE +FP+ ++ +AL  L K   W R +QV KWM+SKGQG TMG
Sbjct: 107 LPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRKRGHWVRAIQVAKWMISKGQGATMG 166

Query: 67  TYGQLIRALDMDHRADEAHLFWSKKIGTDLHSVPWELCKLMLSIYYRNNMLECLVKLFKG 126
           TY  L+ A DMD R D A   W+  I   + S               +NML+ ++++F  
Sbjct: 167 TYDTLLLAFDMDKRVDVAESSWNMIIHAHIRS-------------DHHNMLDKIIEVFAD 213

Query: 127 LEAFDRKPPEKSIVQKVANAYEMLG------MLEEKDRVEQKYIHLFSE 169
           +E    KP E + V++VA A+  LG      ++ ++  ++ KYIH   E
Sbjct: 214 MEELRVKPDEDT-VRRVARAFRELGEEEKWKLVIKRYGLKWKYIHFNGE 261


>Glyma11g25800.1 
          Length = 92

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 6  NLKDSKEAVYGALDAWVAWERQFPIGSIRRALLTLEKEQQWHRVVQVIKWMLSKGQGNTM 65
           L + KE VYGALD W AWE +F + ++ +AL  L K   W RV+Q +K  LS  +G  +
Sbjct: 3  KLPNEKEVVYGALDKWTAWETEFLVIAMCKALKILRKMGHWVRVIQTVK-KLSTTKGQYL 61

Query: 66 G 66
          G
Sbjct: 62 G 62