Jatropha Genome Database

JcCB0003261.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0003261.20 - phase: 0 
         (441 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08350.1                                                       657   0.0  
Glyma01g36890.1                                                       654   0.0  
Glyma11g08350.2                                                       649   0.0  

>Glyma11g08350.1 
          Length = 437

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/379 (82%), Positives = 338/379 (89%)

Query: 63  QVMDQSVGEASSKAPTIVEVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNNTVA 122
           QVMD S  ++    PTIVEVDLG+RSYPIYIGSGLL+QP+ LQRHVHGKRVLVVTN TVA
Sbjct: 59  QVMDPSAAKSEPALPTIVEVDLGSRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNETVA 118

Query: 123 PIYLDRVVDALTRGNPNVSVESVILPDGEKYKNMETLMKVFDKAIESRLDRRCTFVALGG 182
           P+YLD+VVDALTRGNPNVSVESVILPDGE+YK+M+TLMKVFDKAIESRLDRRCTFVALGG
Sbjct: 119 PLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGG 178

Query: 183 GVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVL 242
           GVIGDMCG+AA++FLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKN+IG FYQPQCVL
Sbjct: 179 GVIGDMCGFAASAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNMIGTFYQPQCVL 238

Query: 243 IDTDTLNTLPNRELASGLAEVVKYGLIRDAEFFEWQEKNMPKLMARDPDALAYAIKRSCE 302
           IDTDTLNTLP+RELASGLAEV+KYGLIRDAEFFEWQEKNM  L+ARDP  +AYAIKRSCE
Sbjct: 239 IDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMHLLLARDPSVMAYAIKRSCE 298

Query: 303 NKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEXXXXXXXXXXXXSYRLGW 362
           NKAEVVSLDEKESGLRATLNLGHTFGHAIETG GYGQWLHGE            SYRLGW
Sbjct: 299 NKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGW 358

Query: 363 IDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSVMAVDKKVADXXXXXXXXXXXXXNCVF 422
           IDDS+VKRV +IL+QAKLPTAPP+T+TV+MFKSVMAVDKKVAD             NCVF
Sbjct: 359 IDDSLVKRVGDILKQAKLPTAPPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVF 418

Query: 423 TGDYDRKALDDTLRAFCKS 441
           TGDYDRKALD+TLRAFCKS
Sbjct: 419 TGDYDRKALDNTLRAFCKS 437


>Glyma01g36890.1 
          Length = 436

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/379 (82%), Positives = 335/379 (88%)

Query: 63  QVMDQSVGEASSKAPTIVEVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNNTVA 122
           QV+D    ++    PT VEVDLGNRSYPIYIGSGLL+QP+ LQRHVHGKRVLVVTN TVA
Sbjct: 58  QVLDSLAAKSEPALPTTVEVDLGNRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNKTVA 117

Query: 123 PIYLDRVVDALTRGNPNVSVESVILPDGEKYKNMETLMKVFDKAIESRLDRRCTFVALGG 182
           P+YLD+VVDALTRGNPNVSVESVILPDGE+YK+M+TLMKVFDKAIE RLDRRCTFVALGG
Sbjct: 118 PLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIELRLDRRCTFVALGG 177

Query: 183 GVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVL 242
           GVIGDMCG AAA FLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVL
Sbjct: 178 GVIGDMCGCAAALFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVL 237

Query: 243 IDTDTLNTLPNRELASGLAEVVKYGLIRDAEFFEWQEKNMPKLMARDPDALAYAIKRSCE 302
           IDTDTLNTLP+RELASGLAEV+KYGLIRDAEFFEWQEKNM  L+ARDP A+AYAIKRSCE
Sbjct: 238 IDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMHLLLARDPSAMAYAIKRSCE 297

Query: 303 NKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEXXXXXXXXXXXXSYRLGW 362
           NKAEVVSLDEKESGLRATLNLGHTFGHAIETG GYGQWLHGE            SYRLGW
Sbjct: 298 NKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGW 357

Query: 363 IDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSVMAVDKKVADXXXXXXXXXXXXXNCVF 422
           IDDS+VKRV +IL+QAKLP+APP+T+TV+MFKSVMAVDKKVAD             NCVF
Sbjct: 358 IDDSLVKRVGDILKQAKLPSAPPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVF 417

Query: 423 TGDYDRKALDDTLRAFCKS 441
           TGDYDRKALDDTLRAFCKS
Sbjct: 418 TGDYDRKALDDTLRAFCKS 436


>Glyma11g08350.2 
          Length = 436

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/379 (81%), Positives = 337/379 (88%), Gaps = 1/379 (0%)

Query: 63  QVMDQSVGEASSKAPTIVEVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNNTVA 122
           QVMD S  ++    PTIVEVDLG+RSYPIYIGSGLL+QP+ LQRHVHGKRVLVVTN TVA
Sbjct: 59  QVMDPSAAKSEPALPTIVEVDLGSRSYPIYIGSGLLNQPDYLQRHVHGKRVLVVTNETVA 118

Query: 123 PIYLDRVVDALTRGNPNVSVESVILPDGEKYKNMETLMKVFDKAIESRLDRRCTFVALGG 182
           P+YLD+VVDALTRGNPNVSVESVILPDGE+YK+M+TLMKVFDKAIESRLDRRCTFVALGG
Sbjct: 119 PLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGG 178

Query: 183 GVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVL 242
           GVIGDMCG+AA++FLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKN+IG FYQPQCVL
Sbjct: 179 GVIGDMCGFAASAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNMIGTFYQPQCVL 238

Query: 243 IDTDTLNTLPNRELASGLAEVVKYGLIRDAEFFEWQEKNMPKLMARDPDALAYAIKRSCE 302
           IDTDTLNTLP+RELASGLAEV+KYGLIRDAEFFEWQEKNM  L+ARDP  +AYAIKRSCE
Sbjct: 239 IDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMHLLLARDPSVMAYAIKRSCE 298

Query: 303 NKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEXXXXXXXXXXXXSYRLGW 362
           NKAEVVSLDEKESGLRATLNLGHTFGH ++TG GYGQWLHGE            SYRLGW
Sbjct: 299 NKAEVVSLDEKESGLRATLNLGHTFGH-VKTGVGYGQWLHGEAVAAGTVMAVDMSYRLGW 357

Query: 363 IDDSIVKRVHNILQQAKLPTAPPDTMTVEMFKSVMAVDKKVADXXXXXXXXXXXXXNCVF 422
           IDDS+VKRV +IL+QAKLPTAPP+T+TV+MFKSVMAVDKKVAD             NCVF
Sbjct: 358 IDDSLVKRVGDILKQAKLPTAPPETVTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVF 417

Query: 423 TGDYDRKALDDTLRAFCKS 441
           TGDYDRKALD+TLRAFCKS
Sbjct: 418 TGDYDRKALDNTLRAFCKS 436