Jatropha Genome Database

JcCB0003071.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0003071.30 - phase: 0 
         (398 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g13920.1                                                       234   8e-62
Glyma05g30720.1                                                       222   5e-58
Glyma18g08160.1                                                       165   7e-41
Glyma14g01460.1                                                       158   1e-38
Glyma02g47300.1                                                       157   2e-38
Glyma07g01200.1                                                        55   2e-07
Glyma09g35180.1                                                        50   3e-06
Glyma16g17040.1                                                        49   9e-06

>Glyma08g13920.1 
          Length = 324

 Score =  234 bits (598), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 110/197 (55%), Positives = 142/197 (72%), Gaps = 1/197 (0%)

Query: 203 GLRAPAPQKTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNPRFEVSSVTLNAAY 262
           G++ P  QK++P+TWLGA LC IFW                 RP++P F+VSSVTLNAAY
Sbjct: 128 GIKLPKEQKSQPLTWLGACLCVIFWLIIIIGGLIVLIVYLVFRPQSPHFDVSSVTLNAAY 187

Query: 263 IDADALLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYIESFSTPKTESRFA 322
           +D   LLNAD+++LANFTNPNKKV VDF+ +II LYYG+TLIATQY+E F+  + +SRFA
Sbjct: 188 LDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFNAARLQSRFA 247

Query: 323 NIHMISSQVRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLG-IFRYSYRLYGHCKIMV 381
            IH++SSQV+LPL +S +L  Q+  NGVI +V+G F+ RS LG I RYSY LYG C +M+
Sbjct: 248 YIHLVSSQVQLPLRESQRLVKQMEGNGVILEVRGVFRARSKLGSILRYSYNLYGRCSVML 307

Query: 382 TAPPSGVLRATRCTTKR 398
           T PP G+L   +C TKR
Sbjct: 308 TRPPDGILLKKKCRTKR 324


>Glyma05g30720.1 
          Length = 336

 Score =  222 bits (566), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 108/197 (54%), Positives = 139/197 (70%), Gaps = 3/197 (1%)

Query: 192 QHDHRSRHRPL--GLRAPAPQKTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNP 249
           +H H+ R  P   G++ P  QK++P+TWLGA LC IFW                 RP++P
Sbjct: 138 EHRHQPRRDPRLSGIKLPKEQKSQPLTWLGACLCVIFWLIIIIGGLIVLIVYFVFRPQSP 197

Query: 250 RFEVSSVTLNAAYIDADALLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYI 309
            F+VSSVTLNAAY+D   LLNAD+++LANFTNPNKKV VDF+ +II LYYG+TLIATQY+
Sbjct: 198 HFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYV 257

Query: 310 ESFSTPKTESRFANIHMISSQVRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLG-IFR 368
           E F   + +SRFA IHM+SSQV+LPL +S +L  Q+  NGV+ +V+G F+ RS LG I R
Sbjct: 258 EPFYAARLQSRFAYIHMVSSQVQLPLRESQRLVKQMEGNGVMLEVRGVFRARSKLGTILR 317

Query: 369 YSYRLYGHCKIMVTAPP 385
           YSY LYG C +M+T PP
Sbjct: 318 YSYNLYGRCSVMLTRPP 334


>Glyma18g08160.1 
          Length = 258

 Score =  165 bits (418), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 115/195 (58%)

Query: 204 LRAPAPQKTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNPRFEVSSVTLNAAYI 263
           LR P  Q+T PI W  A LC IF                  +PRNP F++ +  LNA Y 
Sbjct: 64  LRQPPFQRTNPIIWFAAVLCLIFSLLLIFFGVVTLIIFLGIKPRNPYFDIPNANLNAVYF 123

Query: 264 DADALLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYIESFSTPKTESRFAN 323
           D+    N D +L+AN TNPNKK+ V F    ++L++ + +I+TQ IE F+  + ESR  +
Sbjct: 124 DSPEYFNGDFTLVANITNPNKKIDVRFESFDVELFFSDRIISTQSIEPFTQRRRESRLES 183

Query: 324 IHMISSQVRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLGIFRYSYRLYGHCKIMVTA 383
           +H ISS V LP    V L+ Q+  N V ++V+G+FKVR ++G F  SY L+  C+I +T 
Sbjct: 184 LHFISSLVFLPKDLGVNLKGQVQGNRVKYNVRGTFKVRVSMGFFHLSYWLHSRCQIEMTG 243

Query: 384 PPSGVLRATRCTTKR 398
           PP+GVL A +C TKR
Sbjct: 244 PPTGVLVARKCITKR 258


>Glyma14g01460.1 
          Length = 230

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 117/192 (60%)

Query: 207 PAPQKTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNPRFEVSSVTLNAAYIDAD 266
           P  Q+T+PI W  A LC IF                  +PRNP F++ + +LN  Y D+ 
Sbjct: 39  PRLQRTKPIIWCAAILCFIFSLVLIFFGIATLILYLSMKPRNPTFDIPNASLNVVYFDSP 98

Query: 267 ALLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYIESFSTPKTESRFANIHM 326
             LN + +LLANF+NPN+++ + F  + I+L+Y + L+++Q I+ F+    E+R  ++++
Sbjct: 99  QYLNGEFTLLANFSNPNRRIGLRFESLNIELFYSDRLVSSQTIKPFTQRPRETRLQSVNL 158

Query: 327 ISSQVRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLGIFRYSYRLYGHCKIMVTAPPS 386
           ISS V LP    V+LQ Q+  N V ++ +G+FKVR N+G+   SY LY  C+I +T+PP+
Sbjct: 159 ISSLVFLPQDVGVKLQRQVENNRVNYNARGTFKVRFNIGLVHLSYSLYSTCQIEMTSPPA 218

Query: 387 GVLRATRCTTKR 398
           G+L A +C T R
Sbjct: 219 GILVARQCITNR 230


>Glyma02g47300.1 
          Length = 230

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 117/192 (60%)

Query: 207 PAPQKTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNPRFEVSSVTLNAAYIDAD 266
           P  Q+T+PI W  A +C IF                  +PRNP F++ + +LN  Y D+ 
Sbjct: 39  PRLQRTKPIIWCAAIMCFIFSLVLIFFGIATLILYLSMKPRNPTFDIPNASLNVVYFDSP 98

Query: 267 ALLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYIESFSTPKTESRFANIHM 326
             LN + +LLANF+NPN+++ V F  + I+L+Y + L+++Q I+ F+    E+R  ++++
Sbjct: 99  QYLNGEFTLLANFSNPNRRIGVRFESLNIELFYSDRLVSSQTIKPFTQRPRENRLQSVNL 158

Query: 327 ISSQVRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLGIFRYSYRLYGHCKIMVTAPPS 386
           ISS V LP    V+LQ Q+  N V ++ +G+FKVR N+G+   SY LY  C+I +T+PP+
Sbjct: 159 ISSLVFLPQDVGVKLQRQVENNRVNYNARGTFKVRFNVGLIHLSYSLYSTCQIEMTSPPA 218

Query: 387 GVLRATRCTTKR 398
           G+L A +C T R
Sbjct: 219 GILVARQCITNR 230


>Glyma07g01200.1 
          Length = 254

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 245 RPRNPRFEVSSVTLNAAYIDADALLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLI 304
           RP+ P F V+S+ L++  +   + +NA   L  + TNPN K+   ++   + L YG+T +
Sbjct: 82  RPQRPTFSVTSLKLSSFNLTTPSTINAKFDLTLSTTNPNDKIIFSYDPTSVSLLYGDTAV 141

Query: 305 ATQYIESFSTPKTESRFANIHMISSQVRLPLGDSVQLQNQISKNG--VIFDVKGSFKVRS 362
           A+  I SF   +  +     ++ S++  +    +++L+  + +    V   V+   KV +
Sbjct: 142 ASTTIPSFLHRQRNTTVLQAYVTSTEEVVDSDAAMELKRSMKRKSQLVALKVELETKVEA 201

Query: 363 NLGIFR 368
            +G+F+
Sbjct: 202 QMGVFQ 207


>Glyma09g35180.1 
          Length = 191

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 1/188 (0%)

Query: 211 KTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNPRFEVSSVTLNAAYIDADALLN 270
           KT P+ WL A LC I                    PR P   +++  L+    D   LL 
Sbjct: 2   KTHPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVMSITNAHLDLLSNDYAGLLQ 61

Query: 271 ADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYIESFSTPKTESRFANIHMISSQ 330
             ++++    N N K    F+ +  +L Y    IA      F  PK  S+  N  + ++ 
Sbjct: 62  TQLTIIVVAQNGNAKAHATFSDIRFNLSYQGQRIALMRAPPFDVPKNSSKSLNYVVRAAS 121

Query: 331 VRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLG-IFRYSYRLYGHCKIMVTAPPSGVL 389
           + L      ++     ++ + FD+KGS + R  +G +    +     C++         +
Sbjct: 122 IPLTPQQMEEVDESWKRDVIGFDLKGSARTRWRVGPLGSVKFWCNLECQLKFHPSNGSYI 181

Query: 390 RATRCTTK 397
             +RCT+K
Sbjct: 182 HHSRCTSK 189


>Glyma16g17040.1 
          Length = 194

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 2/191 (1%)

Query: 208 APQKTRPITWLGAALCAIFWXXXXXXXXXXXXXXXXXRPRNPRFEVSSVTLNAAYIDADA 267
           A  +T P+ WL A +C I                    PR P   V++  L+    D   
Sbjct: 3   ANGRTNPLVWLVAIICTIIAVAVVVVGIVVFIGYIVIHPRVPVISVTNAHLDLLRNDYAG 62

Query: 268 LLNADISLLANFTNPNKKVSVDFNHMIIDLYYGNTLIATQYIESFSTPKTESRFANIHMI 327
           LL   ++++    N N K    F+ +  ++ Y    IA    + F  PK  S+  +  + 
Sbjct: 63  LLQTQLTIVVTAKNGNAKAHASFSAITFNISYQGQDIAVLVADPFEVPKNSSKDLSYVVQ 122

Query: 328 SSQVRLPLGDSVQLQNQISKNGVIFDVKGSFKVRSNLG-IFRYSYRLYGHCKIMVTAPPS 386
           SS + L      ++ +   +N + FD KG+ + +  +G +    +  +  C +    P +
Sbjct: 123 SSSIPLTPDQMEEVNDAWKRNEIEFDFKGAARTQWRVGPLGSVKFLCHLDCDLKFR-PVN 181

Query: 387 GVLRATRCTTK 397
           G    +RCT+K
Sbjct: 182 GTYIPSRCTSK 192