Jatropha Genome Database

JcCB0001411.50
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0001411.50 - phase: 0 /pseudo/partial
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46300.1                                                       180   7e-46
Glyma14g02260.1                                                       173   1e-43
Glyma14g02410.1                                                       172   1e-43
Glyma14g04000.1                                                        50   1e-06
Glyma02g44730.1                                                        50   1e-06

>Glyma02g46300.1 
          Length = 447

 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 102/124 (82%)

Query: 73  LLSAGSRITCKDFNEKVVKGEAHVLVDVRPAHHFKIVALPNALNIPLTSLEARLPEISSA 132
           LL + SRI+ K+++E ++K E HVLVDVRPAHHFKIV+LP +LNIPL++LEARLPE+SSA
Sbjct: 324 LLPSESRISSKEYSEVILKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLEARLPEVSSA 383

Query: 133 LKEAGGCRGTESESGVSLYIVCRRGNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVDPK 192
           LK+     G  S S   LY+VCRRGNDSQRAVQ LH  GF SAKDI+GGLE+W+H+VDPK
Sbjct: 384 LKKEEEEGGVVSGSSAQLYVVCRRGNDSQRAVQYLHKMGFISAKDIVGGLESWAHNVDPK 443

Query: 193 FPTY 196
           FPTY
Sbjct: 444 FPTY 447


>Glyma14g02260.1 
          Length = 457

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 99/124 (79%)

Query: 73  LLSAGSRITCKDFNEKVVKGEAHVLVDVRPAHHFKIVALPNALNIPLTSLEARLPEISSA 132
           LL   SRI+ K+++E ++K   HVLVDVRPAHHFKI +LP +LNIPL++LEARLPE+SSA
Sbjct: 334 LLPRESRISSKEYSEVIIKKGPHVLVDVRPAHHFKIASLPKSLNIPLSTLEARLPEVSSA 393

Query: 133 LKEAGGCRGTESESGVSLYIVCRRGNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVDPK 192
           LK+     G  S S   LY+VCRRGNDSQRAVQ LH  GFTSAKDI+GGLE+W+H+VD +
Sbjct: 394 LKKEEEESGAVSGSSAQLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAHNVDHQ 453

Query: 193 FPTY 196
           FPTY
Sbjct: 454 FPTY 457


>Glyma14g02410.1 
          Length = 361

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 99/124 (79%)

Query: 73  LLSAGSRITCKDFNEKVVKGEAHVLVDVRPAHHFKIVALPNALNIPLTSLEARLPEISSA 132
           LL   SRI+ K+++E ++K   HVLVDVRPAHHFKI +LP +LNIPL++LEARLPE+SSA
Sbjct: 238 LLPRESRISSKEYSEVIIKKGPHVLVDVRPAHHFKIASLPKSLNIPLSTLEARLPEVSSA 297

Query: 133 LKEAGGCRGTESESGVSLYIVCRRGNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVDPK 192
           LK+     G  S S   LY+VCRRGNDSQRAVQ LH  GFTSAKDI+GGLE+W+H+VD +
Sbjct: 298 LKKEEEESGAVSGSSAQLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAHNVDHQ 357

Query: 193 FPTY 196
           FPTY
Sbjct: 358 FPTY 361


>Glyma14g04000.1 
          Length = 291

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 97  LVDVRPAHHFKIVALPNALNIPLTSLEARLPEISSALKEAGGCRGTESESGVSLYIVCRR 156
           L+DVR        +LP    +PL    +  PEI+           T+ +     Y++C  
Sbjct: 203 LIDVREPDEVAKASLPGFTVLPLRQFGSWGPEIT-----------TKFDPQKDTYVMCHH 251

Query: 157 GNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVDPKFPTY 196
           G  S +  + L S+GF    ++ GG+ A++  VDP  PTY
Sbjct: 252 GMRSLQVAKWLQSQGFRKVYNLSGGIHAYAVQVDPSVPTY 291


>Glyma02g44730.1 
          Length = 292

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 97  LVDVRPAHHFKIVALPNALNIPLTSLEARLPEISSALKEAGGCRGTESESGVSLYIVCRR 156
           L+DVR        +LP    +PL    +  PEI+           T+ +     Y++C  
Sbjct: 204 LIDVREPEEVAKASLPGFTVLPLRQFGSWGPEIT-----------TKFDPQKDTYVLCHH 252

Query: 157 GNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVDPKFPTY 196
           G  S +  + L S+GF    ++ GG+ A++  VDP  PTY
Sbjct: 253 GMRSLQVAKWLQSQGFRKVYNLSGGIHAYAVQVDPSVPTY 292