Jatropha Genome Database

JcCA0317991.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317991.20 + phase: 0 
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17530.1                                                       580   e-166
Glyma17g04980.1                                                       580   e-166
Glyma10g38830.1                                                       302   3e-82
Glyma18g52510.1                                                        93   5e-19
Glyma03g03210.1                                                        85   1e-16
Glyma15g04920.1                                                        82   7e-16
Glyma20g28940.1                                                        49   6e-06

>Glyma13g17530.1 
          Length = 344

 Score =  580 bits (1496), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 283/319 (88%), Positives = 298/319 (93%), Gaps = 14/319 (4%)

Query: 25  GPFPVEQLQESGIAALDIKKLKDAGLCTVESVAYSPRKELLQIKGISDAKVDKIIEAASK 84
           GP PVEQLQ SGIAA D+KKLKDAG+CTVESVAY+PRK+LLQIKGIS+AKVDKIIEAASK
Sbjct: 26  GPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIIEAASK 85

Query: 85  LVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTL 144
           LVP+GFTSAS+LHAQR  IIQIT+GSRELDKILEGG+ETGSITE+YGEFRSGKTQLCHTL
Sbjct: 86  LVPMGFTSASELHAQRDAIIQITTGSRELDKILEGGVETGSITELYGEFRSGKTQLCHTL 145

Query: 145 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQ 204
           CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNG DVLENVAYARAYNTDHQ
Sbjct: 146 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGVDVLENVAYARAYNTDHQ 205

Query: 205 SRLLLEAASMMVET--------------RTDFSGRGELSARQMHLAKFLRSLQKLADEFG 250
           SRLLLEAASMMVET              RTDFSGRGELSARQMHLAKFLRSLQKLADEFG
Sbjct: 206 SRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 265

Query: 251 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 310
           VA+VITNQVV+QVDGSA+FAGPQIKPIGGNIMAHA+TTRLALRKGRGEERICKVISSPCL
Sbjct: 266 VAIVITNQVVSQVDGSAVFAGPQIKPIGGNIMAHATTTRLALRKGRGEERICKVISSPCL 325

Query: 311 AEAEARFQISAEGVTDVKD 329
           AEAEARFQI AEGV+DVKD
Sbjct: 326 AEAEARFQICAEGVSDVKD 344


>Glyma17g04980.1 
          Length = 343

 Score =  580 bits (1494), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 283/319 (88%), Positives = 298/319 (93%), Gaps = 14/319 (4%)

Query: 25  GPFPVEQLQESGIAALDIKKLKDAGLCTVESVAYSPRKELLQIKGISDAKVDKIIEAASK 84
           GP PVEQLQ SGIAA D+KKLKDAG+CTVESVAY+PRK+LLQIKGIS+AKVDKIIEAASK
Sbjct: 25  GPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIIEAASK 84

Query: 85  LVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTL 144
           LVP+GFTSAS+LHAQR  IIQIT+GS ELDKILEGG+ETGSITE+YGEFRSGKTQLCHTL
Sbjct: 85  LVPMGFTSASELHAQRDAIIQITTGSTELDKILEGGVETGSITELYGEFRSGKTQLCHTL 144

Query: 145 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQ 204
           CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQ
Sbjct: 145 CVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQ 204

Query: 205 SRLLLEAASMMVET--------------RTDFSGRGELSARQMHLAKFLRSLQKLADEFG 250
           SRLLLEAASMMVET              RTDFSGRGELSARQMHLAKFLRSLQKLADEFG
Sbjct: 205 SRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFG 264

Query: 251 VAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCL 310
           VA+VITNQVV+QVDGSA+FAGPQIKPIGGNIMAHA+TTRLALRKGRGEERICKVISSPCL
Sbjct: 265 VAIVITNQVVSQVDGSAVFAGPQIKPIGGNIMAHATTTRLALRKGRGEERICKVISSPCL 324

Query: 311 AEAEARFQISAEGVTDVKD 329
           AEAEARFQI AEGV+DVKD
Sbjct: 325 AEAEARFQICAEGVSDVKD 343


>Glyma10g38830.1 
          Length = 335

 Score =  302 bits (774), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 155/301 (51%), Positives = 203/301 (67%), Gaps = 15/301 (4%)

Query: 29  VEQLQESGIAALDIKKLKDAGLCTVESVAYSPRKELLQIKGISDAKVDKIIEAASKLVPL 88
           +++L   GI A D+KKL+DAG+ T   +    +K L  IKG+S+AKVDKI EAA KLV  
Sbjct: 32  IDKLIAQGINAGDVKKLQDAGIYTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKLVNF 91

Query: 89  GFTSASQLHAQRLEIIQITSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTC 148
           G+ + S    +R  +I+IT+GS+ LD++L GG+ET +ITE +GEFRSGKTQL HTLCV+ 
Sbjct: 92  GYITGSDALLKRKSVIRITTGSQALDELLGGGVETSAITEAFGEFRSGKTQLAHTLCVST 151

Query: 149 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLL 208
           QLP +  GG GK  YID EGTFRP R++ IA+RFG++   VL+N+ YARAY  +HQ  LL
Sbjct: 152 QLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLL 211

Query: 209 LEAASMMVET--------------RTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 254
           L  A+ M E               R DFSGRGEL+ RQ  LA+ L  L K+A+EF VAV 
Sbjct: 212 LGLAAKMSEEPFRLLIVDSVIALFRVDFSGRGELADRQQKLAQMLSRLIKIAEEFNVAVY 271

Query: 255 ITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEAE 314
           +TNQV++   G      P+ KP GG+++AHA+T RL  RKG+GE+RICKV  +P L EAE
Sbjct: 272 MTNQVISDPGGGVFVTDPK-KPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPEAE 330

Query: 315 A 315
           A
Sbjct: 331 A 331


>Glyma18g52510.1 
          Length = 288

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 41/264 (15%)

Query: 105 QITSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 164
           + T G   LD+ L GG+   S+TE  GE   GKTQLC  L ++ QLP   GG    +++I
Sbjct: 15  KCTLGCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQLPPSHGGLSASSIFI 74

Query: 165 DAEGTFRPQRLLQIADRF-----GLNGADVLENVAYARAYNTDHQ--------SRLLLEA 211
             E  F  +RL  ++  F      L  +D  + V + RA ++ H+           LL +
Sbjct: 75  HTEFPFPFRRLRHLSRAFRASHPDLPCSDPCDRV-FLRAVHSAHELLNLIPTIETFLLHS 133

Query: 212 AS-------MMVET-----RTDFSGRG-ELSARQMHLAKFLRSLQKLADEFGVAVVITNQ 258
            S       +++++     R+DF   G +L  R          L++LA  FG+AVV+TNQ
Sbjct: 134 KSPWRPVRIIVIDSIAALFRSDFENTGSDLRRRSSLFFGISGGLRQLAKRFGIAVVVTNQ 193

Query: 259 VVAQV-DGSAIF---------AGPQIKPIGGNIMAHASTTRLALRKGRGEE----RICKV 304
           VV  + DG   F         +G ++ P  G   AH   +RL L K   E     R  +V
Sbjct: 194 VVDLIGDGDVSFGSLGNGLYSSGRRVCPALGLAWAHCVNSRLFLSKDEDEPPVKTRKMRV 253

Query: 305 ISSPCLAEAEARFQISAEGVTDVK 328
           + +P L  +   + I  EGV  V+
Sbjct: 254 VFAPHLPHSSCEYVIKGEGVFGVE 277


>Glyma03g03210.1 
          Length = 368

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 31/242 (12%)

Query: 106 ITSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 165
           IT+   +LD IL GGI+   +TEI G    GKTQ+   L V  Q+P + GG  GKA+YI 
Sbjct: 126 ITTSCADLDNILGGGIKCKEVTEIGGVPGIGKTQIGIQLAVNVQIPQEYGGLGGKAIYIA 185

Query: 166 -----AEGTFRPQRLLQIADRFGLNGADVLENVAYARA---------------YNTDHQS 205
                AE +    +  Q  D   ++  ++LEN+ Y R                + T+++ 
Sbjct: 186 CKEDMAEYSRHFHKDFQACD-VKMHPNNILENIFYFRVCSYTEQIALINYLDKFITENKD 244

Query: 206 RLLLEAASMMVETRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQ-VD 264
             +L   S+    R DF    +++ R   L++    L KLA +F +AVV+ NQV  + ++
Sbjct: 245 VKILIVDSVTFHFRQDFD---DMALRTRLLSEMALKLMKLAKKFRLAVVMFNQVTTKHIE 301

Query: 265 GSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAEAEARFQISAEGV 324
           GS      Q+    G+  +H+ T R+ L    G ER   +  SP L  A A + ++  G+
Sbjct: 302 GSF-----QLTLALGDSWSHSCTNRIILF-WNGNERHAFIDKSPSLKSASAPYSVTTRGI 355

Query: 325 TD 326
            +
Sbjct: 356 RN 357


>Glyma15g04920.1 
          Length = 349

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 46/257 (17%)

Query: 113 LDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRP 172
           LD+ L GGI  G +TE+ G    GKTQ C  L +   LP + GG +G+ +YID E  FR 
Sbjct: 82  LDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVIYIDVESKFRS 141

Query: 173 QRLLQIADRFGLNGAD-----------------VLENVAYARAYNTDHQSR--LLLEAAS 213
           +RL++I    G+N                    +L   + +    + HQ R  LL +   
Sbjct: 142 KRLIEI----GINSFPEIFLKKGMAQEMAGRILILHPTSLSEFAESLHQIRVSLLQQQVK 197

Query: 214 MMVETRTDFSGRGEL---SARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV------- 263
           +++         GE    ++RQ  L   +  ++ LA+   + VV+TNQV +Q+       
Sbjct: 198 LLIIDSMAALVLGEHDSEASRQQALGWHVSFIKSLAEFSRIPVVLTNQVRSQIGDESRMY 257

Query: 264 -----------DGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVISSPCLAE 312
                      D  A +    +  +G N  AHA T RL L + R  +R  K+  SP  A 
Sbjct: 258 SFQAQSHSIIKDNPATYDSHLVAALGIN-WAHAVTIRLVL-EARSGQRFIKLAKSPISAP 315

Query: 313 AEARFQISAEGVTDVKD 329
               F+I++ G+  + D
Sbjct: 316 LAFPFKITSSGLVLLDD 332


>Glyma20g28940.1 
          Length = 79

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 33/51 (64%)

Query: 44 KLKDAGLCTVESVAYSPRKELLQIKGISDAKVDKIIEAASKLVPLGFTSAS 94
          KL+DAG+ T   +    +K L  IKG+S+ KVDKI EAA K+V  G+ + S
Sbjct: 2  KLQDAGIYTCNGLMMHTKKNLTGIKGLSEVKVDKICEAAEKIVNFGYITGS 52