Jatropha Genome Database

JcCA0317991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317991.10 - phase: 0 /pseudo/partial
         (298 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g20010.1                                                       342   2e-94
Glyma18g46310.1                                                       174   1e-43
Glyma09g39900.1                                                       171   6e-43
Glyma09g39900.2                                                       156   2e-38

>Glyma15g20010.1 
          Length = 246

 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/260 (67%), Positives = 201/260 (77%), Gaps = 18/260 (6%)

Query: 1   MGTGDEVVEIDXXXXXXXXXXXXXXXXXXXXADDEAVLYTASFEEMEEKFIKYQTAQWVM 60
           MGT +EVVEI+                     D+EAVLY ASF EMEE F+KYQT QWV+
Sbjct: 1   MGTREEVVEIERLEESLLEKNER--------EDEEAVLYAASFREMEEGFVKYQTVQWVL 52

Query: 61  YSLLLILAWGIGLFMLLYLPVRRYILRKDIQSRKLYLTPNAIVYKVTKPVAFPCFGVLKK 120
           YS+LLILAWGIG+ MLLYLPVRR+ILRKD++SR LYLTPNAIVYKVT+PV+FPCFGVLKK
Sbjct: 53  YSVLLILAWGIGILMLLYLPVRRFILRKDVRSRTLYLTPNAIVYKVTRPVSFPCFGVLKK 112

Query: 121 EKHILLPSVADIVIEQGYLQSLFGVCSLRIENVGVRRPPSDDVQIQGVANPNAFKKAVLT 180
           EKH+LL SVAD+VIEQGYLQSLFGV SLRIENVGVRRPPSDDV+IQGVANPNAF+KAV+ 
Sbjct: 113 EKHVLLHSVADVVIEQGYLQSLFGVYSLRIENVGVRRPPSDDVKIQGVANPNAFRKAVMM 172

Query: 181 RLSYMRNEFGSRQVSAIEDIPSLRIGHXXXXXXXXXXXLRHDLLPN-SGDILLLQKLEEV 239
           RLS MRNE  SRQVS +ED+P                 L+HD  PN SG++LL+QKLEEV
Sbjct: 173 RLSNMRNEILSRQVSTLEDVPH-------HLMMSPSMSLKHD--PNPSGELLLMQKLEEV 223

Query: 240 GSSMKRVQSLIEEQHSQSLE 259
           GSS+KR+QSL EEQ SQ  E
Sbjct: 224 GSSVKRIQSLFEEQQSQITE 243


>Glyma18g46310.1 
          Length = 276

 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 145/237 (61%), Gaps = 14/237 (5%)

Query: 35  EAVLYTASFEEMEEKFIKYQTAQWVMYSLLLILAWGIGLFMLLYLPVRRYILRKDIQSRK 94
           E +LY+ASFEE     +KY T  W+  SLLL+LAWGIGL MLLYLP+RRY+L+KD+ SR+
Sbjct: 37  EQILYSASFEEHARNCVKYDTVIWLAISLLLVLAWGIGLLMLLYLPIRRYVLQKDLSSRR 96

Query: 95  LYLTPNAIVYKVTKPVAFPCFGVLKKEKHILLPSVADIVIEQGYLQSLFGVCSLRIENVG 154
           LY+T   +VYKV++P   P +G  + E+ + L  V DI+IEQG LQS++G+ + R+E++ 
Sbjct: 97  LYVTRTEVVYKVSRPSYIPFWGTARIERRVPLSLVIDIIIEQGCLQSIYGIHTFRVESIA 156

Query: 155 V-RRPPSDDVQIQGVANPNAFKKAVLTRLSYMRNEFGSRQVSA-----IEDIPSL-RIGH 207
             +  P D++Q+QGV++P+  +K ++T  S +  +  +    A     +E+I  + R   
Sbjct: 157 HGKAAPVDELQVQGVSDPSLLRKMIITEASKITQDVSTSGNHAGPSTDVENIALMPRATE 216

Query: 208 XXXXXXXXXXXLRHDLLPNSGDI-------LLLQKLEEVGSSMKRVQSLIEEQHSQS 257
                      L+    P++  +       LLL KLEEV  S+KR++ LIE+ H+ S
Sbjct: 217 GSVVLRSPSKSLKMAGSPHTSSLERRVTGGLLLNKLEEVNKSVKRLELLIEKSHASS 273


>Glyma09g39900.1 
          Length = 276

 Score =  171 bits (434), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 143/239 (59%), Gaps = 18/239 (7%)

Query: 35  EAVLYTASFEEMEEKFIKYQTAQWVMYSLLLILAWGIGLFMLLYLPVRRYILRKDIQSRK 94
           E +LY+ASFEE+   ++KY T  W+  SLLL+LAWGIGL MLLYLP+RRY+L+KD+ SR+
Sbjct: 37  EQILYSASFEELASNYVKYDTVIWLAISLLLVLAWGIGLLMLLYLPIRRYVLQKDLSSRR 96

Query: 95  LYLTPNAIVYKVTKPVAFPCFGVLKKEKHILLPSVADIVIEQGYLQSLFGVCSLRIENVG 154
           LY+T   +VYKV++P   P +G +  E+ + L  V DI+IEQG LQS++G+ + R+E++ 
Sbjct: 97  LYVTCTEVVYKVSRPSFIPFWGTVTIERRVPLSLVIDIIIEQGCLQSIYGIHTFRVESIA 156

Query: 155 V-RRPPSDDVQIQGVANPNAFKKAVLTRLSYMRNEFGSRQVSA--------IEDIPSLRI 205
             +  P D++Q+QGV++P   +K ++T  S +  +  +    A        I  +P    
Sbjct: 157 HGKAAPVDELQVQGVSDPFVLRKMIVTEASKITQDVSTSGKHAGPSTDEENIARMPGATE 216

Query: 206 GHXXXXXXXXXXXLRHDLLPNSGDI-------LLLQKLEEVGSSMKRVQSLIEEQHSQS 257
           G            +     P++  +       LLL KLEEV  S+KR++ LIE+ H+ S
Sbjct: 217 GSVVLRSPSKSLKMVGS--PHTSSLECRVAGGLLLNKLEEVNKSVKRLELLIEKLHASS 273


>Glyma09g39900.2 
          Length = 193

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 106/147 (72%), Gaps = 1/147 (0%)

Query: 35  EAVLYTASFEEMEEKFIKYQTAQWVMYSLLLILAWGIGLFMLLYLPVRRYILRKDIQSRK 94
           E +LY+ASFEE+   ++KY T  W+  SLLL+LAWGIGL MLLYLP+RRY+L+KD+ SR+
Sbjct: 37  EQILYSASFEELASNYVKYDTVIWLAISLLLVLAWGIGLLMLLYLPIRRYVLQKDLSSRR 96

Query: 95  LYLTPNAIVYKVTKPVAFPCFGVLKKEKHILLPSVADIVIEQGYLQSLFGVCSLRIENVG 154
           LY+T   +VYKV++P   P +G +  E+ + L  V DI+IEQG LQS++G+ + R+E++ 
Sbjct: 97  LYVTCTEVVYKVSRPSFIPFWGTVTIERRVPLSLVIDIIIEQGCLQSIYGIHTFRVESIA 156

Query: 155 V-RRPPSDDVQIQGVANPNAFKKAVLT 180
             +  P D++Q+QGV++P   +K  L 
Sbjct: 157 HGKAAPVDELQVQGVSDPFVLRKTDLN 183