Jatropha Genome Database

JcCA0317641.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317641.20 + phase: 0 /pseudo/partial
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34940.1                                                       444   e-125
Glyma10g32660.2                                                       438   e-123
Glyma10g32660.1                                                       437   e-123
Glyma02g46440.1                                                       381   e-106
Glyma14g02210.1                                                       378   e-105
Glyma16g16540.1                                                        63   3e-10
Glyma18g06190.1                                                        49   8e-06

>Glyma20g34940.1 
          Length = 424

 Score =  444 bits (1142), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/247 (87%), Positives = 232/247 (93%)

Query: 14  RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMIGGFAFIVYMGHLYIT 73
           R+RHR+RSNEVIPE SK NG  LL++D++KYKSM IRAYS++WMIGGF  I+YMGHLYIT
Sbjct: 16  RVRHRKRSNEVIPEVSKANGTQLLVNDKSKYKSMLIRAYSSVWMIGGFVLIIYMGHLYIT 75

Query: 74  AMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTS 133
           AMVVVIQIFMA+ELFNLLR+AHEDR LPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTS
Sbjct: 76  AMVVVIQIFMARELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTS 135

Query: 134 DKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFTQS 193
           D  LY+LVS+LIKYHM ICY LYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVF QS
Sbjct: 136 DMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFGQS 195

Query: 194 SFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTM 253
           SFTVA+IFEGIFWFLLPATLIVINDI AYIFGFFFG+TPLIKLSPKKTWEGFIGASVTT+
Sbjct: 196 SFTVASIFEGIFWFLLPATLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTI 255

Query: 254 ISAFVLC 260
           ISAF+L 
Sbjct: 256 ISAFMLA 262


>Glyma10g32660.2 
          Length = 424

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/247 (86%), Positives = 230/247 (93%)

Query: 14  RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMIGGFAFIVYMGHLYIT 73
           R+RHR+RSNEVIPE SK NG  LL++D++KYKSM IRAYS++WMIGGF  I+YMGHLYIT
Sbjct: 16  RVRHRKRSNEVIPEVSKANGTKLLVNDKSKYKSMLIRAYSSVWMIGGFVLIIYMGHLYIT 75

Query: 74  AMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTS 133
           AMVVVIQIFMA+ELFNLLR+AHEDR LPGFRLLNWHFFFTAMLFVYGRILSQ LVNTVTS
Sbjct: 76  AMVVVIQIFMARELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILSQCLVNTVTS 135

Query: 134 DKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFTQS 193
           D  LY LVS+LIKYHM ICY LYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVF QS
Sbjct: 136 DMVLYWLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFGQS 195

Query: 194 SFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTM 253
           SFTVA+IFEGIFWFLLPATLIVINDI AYIFGFFFG+TPLIKLSPKKTWEGFIGASVTT+
Sbjct: 196 SFTVASIFEGIFWFLLPATLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTI 255

Query: 254 ISAFVLC 260
           ISAF+L 
Sbjct: 256 ISAFMLA 262


>Glyma10g32660.1 
          Length = 424

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/246 (86%), Positives = 230/246 (93%)

Query: 14  RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMIGGFAFIVYMGHLYIT 73
           R+RHR+RSNEVIPE SK NG  LL++D++KYKSM IRAYS++WMIGGF  I+YMGHLYIT
Sbjct: 16  RVRHRKRSNEVIPEVSKANGTKLLVNDKSKYKSMLIRAYSSVWMIGGFVLIIYMGHLYIT 75

Query: 74  AMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTS 133
           AMVVVIQIFMA+ELFNLLR+AHEDR LPGFRLLNWHFFFTAMLFVYGRILSQ LVNTVTS
Sbjct: 76  AMVVVIQIFMARELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILSQCLVNTVTS 135

Query: 134 DKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFTQS 193
           D  LY LVS+LIKYHM ICY LYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVF QS
Sbjct: 136 DMVLYWLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFGQS 195

Query: 194 SFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTM 253
           SFTVA+IFEGIFWFLLPATLIVINDI AYIFGFFFG+TPLIKLSPKKTWEGFIGASVTT+
Sbjct: 196 SFTVASIFEGIFWFLLPATLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTI 255

Query: 254 ISAFVL 259
           ISAF+L
Sbjct: 256 ISAFML 261


>Glyma02g46440.1 
          Length = 407

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/253 (72%), Positives = 217/253 (85%), Gaps = 1/253 (0%)

Query: 15  LRHRRRSNEVIP-EASKENGGHLLLHDRNKYKSMWIRAYSTIWMIGGFAFIVYMGHLYIT 73
           ++++ R    IP E SK NG +LL++D++KYKSMWIRAYS++WM+   + I+Y+GHLYI 
Sbjct: 2   IQNQLRGFGHIPAEISKSNGNNLLVNDKSKYKSMWIRAYSSLWMLASVSLIIYLGHLYIW 61

Query: 74  AMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTS 133
           AMVVVIQIFMA ELFNLLR+A +D+ LP F+ LNWH+FFTAMLFVYGRILSQ+LVNTVTS
Sbjct: 62  AMVVVIQIFMASELFNLLRRATQDKRLPKFKFLNWHYFFTAMLFVYGRILSQQLVNTVTS 121

Query: 134 DKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFTQS 193
           DKFLY+ VS+LIKY M ICYFLYIAGF+WFIL+LKK+ YKYQFGQYAWTHMILIVVFTQS
Sbjct: 122 DKFLYRFVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQS 181

Query: 194 SFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTM 253
           +FTVANIF GIFWFL PA+LI +ND+ AY FGF+FG+TPLIKLSPKKTWEGFIGASV TM
Sbjct: 182 AFTVANIFAGIFWFLFPASLIAMNDVGAYFFGFYFGRTPLIKLSPKKTWEGFIGASVATM 241

Query: 254 ISAFVLCVLCRKF 266
           I+AF       +F
Sbjct: 242 IAAFTFANFLGRF 254


>Glyma14g02210.1 
          Length = 396

 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/243 (74%), Positives = 210/243 (86%), Gaps = 1/243 (0%)

Query: 25  IP-EASKENGGHLLLHDRNKYKSMWIRAYSTIWMIGGFAFIVYMGHLYITAMVVVIQIFM 83
           IP E SK NG +LL+ D++KYKSMWIRAYS++WM+   + I+Y+GHLYI AMVVVIQIFM
Sbjct: 1   IPAEISKSNGNNLLVDDKSKYKSMWIRAYSSLWMLASVSLIIYLGHLYIWAMVVVIQIFM 60

Query: 84  AKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQLVSS 143
           A ELFNLLR+A +D+ LP F+LLNWH+FFTAMLFVYGRILSQ+LVNTVTSDK LY+ VS+
Sbjct: 61  ASELFNLLRRASQDKRLPKFKLLNWHYFFTAMLFVYGRILSQQLVNTVTSDKLLYRFVSN 120

Query: 144 LIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFTQSSFTVANIFEG 203
           LIKY M ICYFLYIAGF+WFIL+LKK+ YKYQFGQYAWTHMILIVVFTQS+FTVANIF G
Sbjct: 121 LIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFVG 180

Query: 204 IFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTMISAFVLCVLC 263
           IFWFL PA LI +ND+ AY FGF+FG+TPLIKLSPKKTWEGFIGASV TMI+AF      
Sbjct: 181 IFWFLFPAILIAMNDVGAYFFGFYFGRTPLIKLSPKKTWEGFIGASVATMIAAFTFANFL 240

Query: 264 RKF 266
            +F
Sbjct: 241 GRF 243


>Glyma16g16540.1 
          Length = 166

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 34/37 (91%)

Query: 204 IFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKK 240
           ++ FLLPATLIVINDI +YIFGFFFG+TPLIKLS +K
Sbjct: 61  LYRFLLPATLIVINDIASYIFGFFFGRTPLIKLSQRK 97


>Glyma18g06190.1 
          Length = 396

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)

Query: 211 ATLIVIN-----DIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTMISAFVLCVLCRK 265
           ATLI I+     D FA++ G  FG+TPL  +SPKKTWEG I      ++++ VL  +   
Sbjct: 263 ATLITISSVIAADTFAFLGGKAFGRTPLTSISPKKTWEGTIIGFCGCIVTSAVLSKIFSW 322

Query: 266 FVAMSRSI 273
            + +SR+I
Sbjct: 323 PIPLSRAI 330