Jatropha Genome Database

JcCA0317631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317631.10 - phase: 0 /partial/short
         (31 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27810.1                                                        63   8e-11

>Glyma13g27810.1 
          Length = 601

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 30/31 (96%)

Query: 1   MPGTIMAMGRLNRPSIMVYGGTIKPGHFNGH 31
           MPGTI+AMGRLNRPSIMVYGGTIKPGHF G+
Sbjct: 170 MPGTIIAMGRLNRPSIMVYGGTIKPGHFEGN 200