Jatropha Genome Database

JcCA0317481.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317481.20 - phase: 0 
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43410.1                                                       181   2e-46
Glyma18g10140.1                                                       178   1e-45
Glyma11g00300.2                                                        76   1e-14
Glyma11g00300.1                                                        75   1e-14
Glyma01g45430.1                                                        75   2e-14
Glyma11g09580.1                                                        71   2e-13
Glyma01g35780.1                                                        70   6e-13
Glyma01g39030.1                                                        52   2e-07
Glyma11g06240.1                                                        52   2e-07
Glyma08g43590.2                                                        47   7e-06
Glyma08g43590.1                                                        47   7e-06
Glyma17g01230.1                                                        46   8e-06
Glyma07g39530.1                                                        46   8e-06
Glyma01g39030.2                                                        46   9e-06

>Glyma08g43410.1 
          Length = 100

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/100 (88%), Positives = 94/100 (94%)

Query: 1   MLPQQMKKAITENPKKLANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDP 60
           MLPQ+MKKAIT+NPKKLANLIDLVNLPSTLREFVGQSQISRLGCF  +WSYIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCIWSYIKTNNLQDQ 60

Query: 61  KNKNIVNCDEKLKGILLGKPQVDLAELPALIKLHFPKGPK 100
            NKN+VNCDEKLK ILLGKPQV+LAELPALIK+HFPK PK
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>Glyma18g10140.1 
          Length = 100

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/100 (88%), Positives = 93/100 (93%)

Query: 1   MLPQQMKKAITENPKKLANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDP 60
           MLPQ+MKKAIT+NPKKLANLIDLVNLPSTLREFVGQSQISRLGCF  VW YIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWFYIKTNNLQDQ 60

Query: 61  KNKNIVNCDEKLKGILLGKPQVDLAELPALIKLHFPKGPK 100
            NKN+VNCDEKLK ILLGKPQV+LAELPALIK+HFPK PK
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>Glyma11g00300.2 
          Length = 118

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%)

Query: 30  LREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGILLGKPQVDLAELPA 89
           + + VG  +++R     R+W+YIK NNLQDP +K  +NCDEKLK +  GK QV++ E+  
Sbjct: 46  MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 105

Query: 90  LIKLHFPKG 98
           LI  HF K 
Sbjct: 106 LISPHFLKS 114


>Glyma11g00300.1 
          Length = 148

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%)

Query: 30  LREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGILLGKPQVDLAELPA 89
           + + VG  +++R     R+W+YIK NNLQDP +K  +NCDEKLK +  GK QV++ E+  
Sbjct: 76  MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 135

Query: 90  LIKLHFPKG 98
           LI  HF K 
Sbjct: 136 LISPHFLKS 144


>Glyma01g45430.1 
          Length = 158

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 45/69 (65%)

Query: 30  LREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGILLGKPQVDLAELPA 89
           + + VG  +++R     R+W+YIK NNLQDP +K  +NCDEKLK +  GK QV++ E+  
Sbjct: 86  MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 145

Query: 90  LIKLHFPKG 98
           LI  HF K 
Sbjct: 146 LISPHFLKS 154


>Glyma11g09580.1 
          Length = 132

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query: 23  LVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGILLGKPQV 82
           +V + S L +F+G  Q+SR     +VW+YIK  NLQ+P NK  + CDEKLK I  GK +V
Sbjct: 56  VVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKV 115

Query: 83  DLAELPALIKLHFPK 97
              E+  L+  HF K
Sbjct: 116 GFTEIAKLLSSHFVK 130


>Glyma01g35780.1 
          Length = 132

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query: 23  LVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGILLGKPQV 82
           +V + S L +F+G  Q+SR     +VW+YIK  NLQ+P NK  + CDEKLK I  GK +V
Sbjct: 56  VVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKV 115

Query: 83  DLAELPALIKLHFPK 97
              E+  L+  HF K
Sbjct: 116 GFTEIAKLLSNHFVK 130


>Glyma01g39030.1 
          Length = 337

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)

Query: 34  VGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGIL 76
            G+S+++R     R+W YIK NNLQDP +K  + CDEKLK + 
Sbjct: 272 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 314



 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%)

Query: 15  KKLANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKG 74
           K+      L +L   L+EF+   +++R     ++W YI+  NLQDP N+  + CDE+L+ 
Sbjct: 131 KRGGGFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRS 190

Query: 75  IL 76
           + 
Sbjct: 191 LF 192


>Glyma11g06240.1 
          Length = 346

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 5/54 (9%)

Query: 23  LVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGIL 76
           LVN   T     G+S+++R     R+W YIK NNLQDP +K  + CDEKLK + 
Sbjct: 275 LVNFLGT-----GESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 323



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 15  KKLANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKG 74
           K+      L +L   L+EF+G  +++R     ++W+YI+  NLQDP N+  + CDE+L+ 
Sbjct: 140 KRGGGFCKLCSLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDERLRS 199

Query: 75  IL 76
           + 
Sbjct: 200 LF 201


>Glyma08g43590.2 
          Length = 330

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 34/59 (57%)

Query: 18  ANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGIL 76
             L  +  +   L+  VGQ  +SR     ++W+YI+ NNLQDP NK  + C+++L+ + 
Sbjct: 146 GGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVF 204


>Glyma08g43590.1 
          Length = 330

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 34/59 (57%)

Query: 18  ANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGIL 76
             L  +  +   L+  VGQ  +SR     ++W+YI+ NNLQDP NK  + C+++L+ + 
Sbjct: 146 GGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVF 204


>Glyma17g01230.1 
          Length = 329

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 3   PQQMKKAITENPKK---LANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQD 59
           PQ  K+++    K+      L  +  +   L+  VG+  + R     ++W+YIK NNLQD
Sbjct: 123 PQVPKESVQTGSKRRGGAGGLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQD 182

Query: 60  PKNKNIVNCDEKLKGILLGKPQVDLAELPALIKLH-FPKGP 99
           P NK  + CD+ L+ ++      D+ ++  L+  H  P GP
Sbjct: 183 PGNKRKIICDDALR-LVFETDCTDMFKMNQLLAKHIIPLGP 222


>Glyma07g39530.1 
          Length = 332

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 30  LREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKGILLGKPQVDLAELPA 89
           L+  VG+  + R     ++W+YIK NNLQDP NK  + CD+ L+ ++      D+ ++  
Sbjct: 156 LQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALR-LVFETDCTDMFKMNQ 214

Query: 90  LIKLH-FPKGP 99
           L+  H  P GP
Sbjct: 215 LLAKHIIPLGP 225


>Glyma01g39030.2 
          Length = 243

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%)

Query: 15  KKLANLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNIVNCDEKLKG 74
           K+      L +L   L+EF+   +++R     ++W YI+  NLQDP N+  + CDE+L+ 
Sbjct: 131 KRGGGFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRS 190

Query: 75  IL 76
           + 
Sbjct: 191 LF 192