Jatropha Genome Database

JcCA0317291.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317291.30 + phase: 0 /partial
         (379 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g08190.1                                                       315   4e-86
Glyma15g19690.1                                                       249   5e-66
Glyma11g21540.1                                                        62   1e-09
Glyma11g21540.2                                                        62   1e-09
Glyma13g33460.1                                                        57   4e-08
Glyma07g10090.1                                                        55   1e-07
Glyma19g45180.1                                                        54   3e-07
Glyma07g05070.1                                                        52   1e-06

>Glyma09g08190.1 
          Length = 286

 Score =  315 bits (808), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 157/222 (70%), Positives = 180/222 (81%), Gaps = 2/222 (0%)

Query: 14  SNTLQSICYKRGSLHLLDQRKLPLETEYLVIGDASDGWSAIREMVVRGXXXXXXXXXXXX 73
           + TLQ+ICYKRGSL LLDQRKLPLET YL I D++DGW+AIREMVVRG            
Sbjct: 10  ATTLQAICYKRGSLQLLDQRKLPLETVYLEIRDSTDGWNAIREMVVRGAPAIAIAAALSL 69

Query: 74  XVEVFNLQDFNGTSDDAGSFLFQKLDYLVSSRPTAVNLSDAATKLKEVIXXXXXXXXXXX 133
            VEVFNL DFNG++ DA S L +KL+YLV+SRPTAVNLSDAATKLKEVI           
Sbjct: 70  AVEVFNL-DFNGSATDAVSLLQKKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGR 128

Query: 134 XVFQAYIEAAEIMLEDDVASNKAIGSHGASFIKNQLKNIERLSVLTHCNTGSLATAGYGT 193
            VFQ YI+AAE+MLEDDVASN+AIGS+GAS I+ Q +  ++LSVLTHCNTGSLATAGYGT
Sbjct: 129 SVFQVYIDAAEVMLEDDVASNRAIGSYGASIIQQQTEK-QKLSVLTHCNTGSLATAGYGT 187

Query: 194 ALGVIRSLHTDGVLERAYCTETRPFNQGARLTAFELVHDKIP 235
           ALGVIR+LH+ GVL+RAYCTETRPFNQG+RLTAFELVH+KIP
Sbjct: 188 ALGVIRALHSAGVLKRAYCTETRPFNQGSRLTAFELVHEKIP 229


>Glyma15g19690.1 
          Length = 200

 Score =  249 bits (635), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 126/186 (67%), Positives = 149/186 (80%), Gaps = 4/186 (2%)

Query: 136 FQAYIEAAEIMLEDDVASNKAIGSHGASFIKNQLKNIERLSVLTHCNTGSLATAGYGTAL 195
           ++ YI+AAE+MLEDDVASN+AIGS+GAS I++Q +  ++ SVLTHCNTGSLATAGYGTAL
Sbjct: 3   WEMYIDAAEVMLEDDVASNRAIGSYGASIIQHQTEK-QKFSVLTHCNTGSLATAGYGTAL 61

Query: 196 GVIRSLHTDGVLERAYCTETRPFNQGARLTAFELVHDKIPXXXXXXXX--XXXLMKDGRV 253
           GVIR+LH+ GVLER YCTETRPFNQG+RLTAFELVH+K+              LMK G V
Sbjct: 62  GVIRALHSAGVLERVYCTETRPFNQGSRLTAFELVHEKLSGTLISNSILLQLQLMKAGHV 121

Query: 254 SAVIVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSIDLCLSSGNQIVIEER 313
            AV+VGADRVA+NGDTANKIGT S+AL A  HN+PFYVAAPLTS DL LSSG +I +E R
Sbjct: 122 DAVVVGADRVASNGDTANKIGTDSVALSAKFHNVPFYVAAPLTSNDLSLSSGQEIDLESR 181

Query: 314 -SPKEL 318
             P+E 
Sbjct: 182 LLPQEF 187


>Glyma11g21540.1 
          Length = 415

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 252 RVSAVIVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSIDLC--LSSGNQIV 309
           +V+ VIVGA  V ANG     IG + +AL A  H +PF V A   S  LC       Q++
Sbjct: 276 QVNMVIVGAHAVMANGGVIAPIGLHMVALAAQRHAVPFVVLA--GSHKLCPLYPHNPQVL 333

Query: 310 IEE-RSPKELLN--TRGGLGEQVAASG-ISIWNPAFDVTPANLISGIITE 355
           + E RSP ELL+      L +    SG + + NPAFD  P NL+S  IT+
Sbjct: 334 LTELRSPSELLDFGEFSDLMDSATGSGSLHVVNPAFDYVPPNLVSLFITD 383


>Glyma11g21540.2 
          Length = 391

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 252 RVSAVIVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSIDLC--LSSGNQIV 309
           +V+ VIVGA  V ANG     IG + +AL A  H +PF V A   S  LC       Q++
Sbjct: 252 QVNMVIVGAHAVMANGGVIAPIGLHMVALAAQRHAVPFVVLA--GSHKLCPLYPHNPQVL 309

Query: 310 IEE-RSPKELLN--TRGGLGEQVAASG-ISIWNPAFDVTPANLISGIITE 355
           + E RSP ELL+      L +    SG + + NPAFD  P NL+S  IT+
Sbjct: 310 LTELRSPSELLDFGEFSDLMDSATGSGSLHVVNPAFDYVPPNLVSLFITD 359


>Glyma13g33460.1 
          Length = 415

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 16/114 (14%)

Query: 252 RVSAVIVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSIDLC-LSSGNQIVI 310
           RV+ VIVGA  V ANG     +G   +AL A  H +PF V A   S  LC L   N  V+
Sbjct: 276 RVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLA--GSHKLCPLYPHNPEVL 333

Query: 311 --EERSPKELLNTRGGLGE----QVAASG---ISIWNPAFDVTPANLISGIITE 355
             E RSP ELL+     GE      +ASG   + + NP FD  P  L+S  IT+
Sbjct: 334 LNELRSPSELLD----FGEFSDCMDSASGAGSLHVVNPTFDYVPPKLVSLFITD 383


>Glyma07g10090.1 
          Length = 415

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 57/114 (50%), Gaps = 16/114 (14%)

Query: 252 RVSAVIVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSIDLC-LSSGNQIVI 310
           RV+ VIVGA  V ANG     +G    AL A  H +PF V A   S  LC L   N  V+
Sbjct: 276 RVNMVIVGAHAVMANGGVIAPVGLNMAALAAQRHAVPFVVLA--GSHKLCPLYPHNPEVL 333

Query: 311 --EERSPKELLNTRGGLGE----QVAASG---ISIWNPAFDVTPANLISGIITE 355
             E RSP ELL+     GE      +ASG   + + NP FD  P  L+S  IT+
Sbjct: 334 LNELRSPSELLD----FGEFSDCMDSASGAGSLHVVNPTFDYVPPKLVSLFITD 383


>Glyma19g45180.1 
          Length = 369

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 207 LERAYCTETRPFNQGARLTAFELVHDKIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAAN 266
           L R +CTE RP   G RL+  EL    +P            M +  V  V VGAD V  +
Sbjct: 214 LFRVFCTEGRPDRTGLRLSN-ELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVES 270

Query: 267 GDTANKIGTYSLALCAMHHNIPFYVAA 293
           G   N +GTY +AL A   N P YVAA
Sbjct: 271 GGIINMMGTYQIALVAHSMNKPVYVAA 297


>Glyma07g05070.1 
          Length = 347

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 3/99 (3%)

Query: 195 LGVIRSLHTDGVLERAYCTETRPFNQGARLTAFELVHDKIPXXXXXXXXXXXLMKDGRVS 254
           L +++    +  L R +CTE RP   G RL+  EL    +P            M +  V 
Sbjct: 180 LQILKLAAQNNKLFRVFCTEGRPDRTGLRLSN-ELAKLDVPVKLVIDSAVAYTMDE--VD 236

Query: 255 AVIVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAA 293
            V VGAD V  +G   N +GTY ++L A   + P YVAA
Sbjct: 237 MVFVGADGVVESGGIINMMGTYQISLVAKSMSKPVYVAA 275