Jatropha Genome Database

JcCA0317221.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317221.20 - phase: 0 /partial
         (522 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05290.1                                                       724   0.0  
Glyma12g05290.2                                                       341   1e-93

>Glyma12g05290.1 
          Length = 610

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/526 (67%), Positives = 425/526 (80%), Gaps = 5/526 (0%)

Query: 1   ERSILEPK----KKQQRSCRISVSTDVSLISNSHISQPDTFPPLVXXXXXXXXXXXXXFH 56
           ERS+  P      + +   RI++  D  L +NS + Q +  PPLV             FH
Sbjct: 86  ERSLAPPSVTSVGQDESIGRIAIRNDHVLRNNSPVLQQNGLPPLVSALKASAEQNVASFH 145

Query: 57  FPGHNRGRAAPVSLTQLIGLRPFIHDLPELPELDNLFSPEGPILKAQMLAAKLFGSLETW 116
           FPGHNRGRAAP SLT+LIG RPF+HDLPELPELDNLF P+GPIL+AQ  AAKLFGS +TW
Sbjct: 146 FPGHNRGRAAPASLTRLIGTRPFVHDLPELPELDNLFCPQGPILEAQTEAAKLFGSSQTW 205

Query: 117 FLVGGTTCGIQASIMATCSPGEHIILPRNCHISAISAMVLSGAIPKYIIPEYDCRWDIAG 176
           FLVGGTTCGIQA+IMATCSPGE +ILPRN HISAISA+VLSGA+PKYI+P+Y+  WDIAG
Sbjct: 206 FLVGGTTCGIQAAIMATCSPGEFLILPRNSHISAISALVLSGAVPKYIVPDYENDWDIAG 265

Query: 177 GMTPSQVEKAIKELEMEGHKPAAVFVTSPTYHGISSNLNEISELCHSREIPVIVDEAHGA 236
           G+TP QV KAI+ELEMEG K AAVF+TSPTYHGI SNL+EISELCHS +IP++VDEAHGA
Sbjct: 266 GVTPLQVLKAIQELEMEGKKAAAVFITSPTYHGICSNLSEISELCHSHKIPLLVDEAHGA 325

Query: 237 HLGFHPQMPLSALKQGADLVVQSTHKVLSSLTQSSMLHMSGNIVDKERICQCLQTLQSTS 296
           H GFH ++P SAL+QGADL VQSTHKVL SLTQSSMLHMSGNIVDKE+I +CLQTLQSTS
Sbjct: 326 HFGFHTELPNSALQQGADLTVQSTHKVLCSLTQSSMLHMSGNIVDKEKISRCLQTLQSTS 385

Query: 297 PSYLLLASLDAARAQLSEKPETIFNGAMKLATEAKNLIKKIPGITLLEIPSFSKFPAMDP 356
           PSYLLLASLDAARAQLSE P+ +FN AM LA EAK ++K+IPGI++LE  SF  FPA+DP
Sbjct: 386 PSYLLLASLDAARAQLSESPDVVFNQAMALAYEAKCMLKRIPGISVLENSSFPTFPAIDP 445

Query: 357 LRLTIGFWQLGLSGYEADDILDRNHRVVSELVESQSITFAINLGTCEEHVQRLVSGLKEL 416
           LRLT+GFW++GLSGYEAD+IL  ++ VV ELV ++SIT+A NLGTC +HVQRL+SG+K L
Sbjct: 446 LRLTVGFWKVGLSGYEADEILYGDYGVVCELVGNKSITYAFNLGTCRDHVQRLLSGIKHL 505

Query: 417 SASSLKTGTIEEKVKNGQNVLFTDISMTLNPRDAFFAKKRRVSIRESLGKVCGELICPYP 476
           +A+ +     EE+V    +  F D   +L PRDAFFA KR+V+I+ES+G++ GELICPYP
Sbjct: 506 AATYVTIQQPEERVLT-VHAPFDDKITSLIPRDAFFASKRKVTIKESIGEISGELICPYP 564

Query: 477 PGIPAMIPGEVITERVLDYLLDVRSKGVVINGASDPQLSSIVICNV 522
           PGIP +IPGEVIT++ +DYLL VRSKG  I GASDP LSSIV+CNV
Sbjct: 565 PGIPVLIPGEVITKKAVDYLLHVRSKGGDITGASDPLLSSIVVCNV 610


>Glyma12g05290.2 
          Length = 250

 Score =  341 bits (874), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 167/251 (66%), Positives = 206/251 (82%), Gaps = 1/251 (0%)

Query: 272 MLHMSGNIVDKERICQCLQTLQSTSPSYLLLASLDAARAQLSEKPETIFNGAMKLATEAK 331
           MLHMSGNIVDKE+I +CLQTLQSTSPSYLLLASLDAARAQLSE P+ +FN AM LA EAK
Sbjct: 1   MLHMSGNIVDKEKISRCLQTLQSTSPSYLLLASLDAARAQLSESPDVVFNQAMALAYEAK 60

Query: 332 NLIKKIPGITLLEIPSFSKFPAMDPLRLTIGFWQLGLSGYEADDILDRNHRVVSELVESQ 391
            ++K+IPGI++LE  SF  FPA+DPLRLT+GFW++GLSGYEAD+IL  ++ VV ELV ++
Sbjct: 61  CMLKRIPGISVLENSSFPTFPAIDPLRLTVGFWKVGLSGYEADEILYGDYGVVCELVGNK 120

Query: 392 SITFAINLGTCEEHVQRLVSGLKELSASSLKTGTIEEKVKNGQNVLFTDISMTLNPRDAF 451
           SIT+A NLGTC +HVQRL+SG+K L+A+ +     EE+V    +  F D   +L PRDAF
Sbjct: 121 SITYAFNLGTCRDHVQRLLSGIKHLAATYVTIQQPEERVLT-VHAPFDDKITSLIPRDAF 179

Query: 452 FAKKRRVSIRESLGKVCGELICPYPPGIPAMIPGEVITERVLDYLLDVRSKGVVINGASD 511
           FA KR+V+I+ES+G++ GELICPYPPGIP +IPGEVIT++ +DYLL VRSKG  I GASD
Sbjct: 180 FASKRKVTIKESIGEISGELICPYPPGIPVLIPGEVITKKAVDYLLHVRSKGGDITGASD 239

Query: 512 PQLSSIVICNV 522
           P LSSIV+CNV
Sbjct: 240 PLLSSIVVCNV 250