Jatropha Genome Database

JcCA0317221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317221.10 - phase: 0 /partial
         (505 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05290.1                                                       553   e-157
Glyma12g05290.2                                                       186   5e-47

>Glyma12g05290.1 
          Length = 610

 Score =  553 bits (1426), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 283/490 (57%), Positives = 351/490 (71%), Gaps = 6/490 (1%)

Query: 16  LAFPSNWTLKSLRKRTGISDSVSPERSTSKPEKKQQRSSQGKSISSRKDDSLISNFHVSQ 75
           L FP      + R       S++P   TS      Q  S G+ I+ R D  L +N  V Q
Sbjct: 68  LHFPDFANTSTFRLHCSQERSLAPPSVTSV----GQDESIGR-IAIRNDHVLRNNSPVLQ 122

Query: 76  PDTSPPLVTXXXXXXXXXXXTFHFPGHNRGQAAPVSLTQLIGLKPFIHDLTGLQVLDKLF 135
            +  PPLV+           +FHFPGHNRG+AAP SLT+LIG +PF+HDL  L  LD LF
Sbjct: 123 QNGLPPLVSALKASAEQNVASFHFPGHNRGRAAPASLTRLIGTRPFVHDLPELPELDNLF 182

Query: 136 SPEGPIVEAQKQAAKLFGSLETWFLVGGTTSGIQAAIMATCSPGEHIILPRNCHVSAISA 195
            P+GPI+EAQ +AAKLFGS +TWFLVGGTT GIQAAIMATCSPGE +ILPRN H+SAISA
Sbjct: 183 CPQGPILEAQTEAAKLFGSSQTWFLVGGTTCGIQAAIMATCSPGEFLILPRNSHISAISA 242

Query: 196 MVLSGAIPKYIIPEYDSEWDIAGGITPLQVEKAIKELEMEGHKPAAVFVTSPTYNGICSN 255
           +VLSGA+PKYI+P+Y+++WDIAGG+TPLQV KAI+ELEMEG K AAVF+TSPTY+GICSN
Sbjct: 243 LVLSGAVPKYIVPDYENDWDIAGGVTPLQVLKAIQELEMEGKKAAAVFITSPTYHGICSN 302

Query: 256 LNEISQLCHCRKIPLIADEAHGAHLGFHPQLPLSALKQNADLVVQSTHKVLSSLTQSSML 315
           L+EIS+LCH  KIPL+ DEAHGAH GFH +LP SAL+Q ADL VQSTHKVL SLTQSSML
Sbjct: 303 LSEISELCHSHKIPLLVDEAHGAHFGFHTELPNSALQQGADLTVQSTHKVLCSLTQSSML 362

Query: 316 HMSGNIVDRERISRCXXXXXXXXXXXXXXXXXXXXXXXXXENPETIFHETMKLAIESKEL 375
           HMSGNIVD+E+ISRC                         E+P+ +F++ M LA E+K +
Sbjct: 363 HMSGNIVDKEKISRCLQTLQSTSPSYLLLASLDAARAQLSESPDVVFNQAMALAYEAKCM 422

Query: 376 IKKIPGITWLELPPSFCKFPAKDPLRLTVGFWQLGLSGCKAGDILYRNHGIVPELVESRS 435
           +K+IPGI+ LE   SF  FPA DPLRLTVGFW++GLSG +A +ILY ++G+V ELV ++S
Sbjct: 423 LKRIPGISVLE-NSSFPTFPAIDPLRLTVGFWKVGLSGYEADEILYGDYGVVCELVGNKS 481

Query: 436 ITLAINLGTCKEHVQRLVSGLEELSASSLKTGTEEKVKNGENIPFTDISMSLNPRDAFFA 495
           IT A NLGTC++HVQRL+SG++ L+A+ +     E+     + PF D   SL PRDAFFA
Sbjct: 482 ITYAFNLGTCRDHVQRLLSGIKHLAATYVTIQQPEERVLTVHAPFDDKITSLIPRDAFFA 541

Query: 496 KKRRVSIGES 505
            KR+V+I ES
Sbjct: 542 SKRKVTIKES 551


>Glyma12g05290.2 
          Length = 250

 Score =  186 bits (472), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 95/192 (49%), Positives = 128/192 (66%), Gaps = 1/192 (0%)

Query: 314 MLHMSGNIVDRERISRCXXXXXXXXXXXXXXXXXXXXXXXXXENPETIFHETMKLAIESK 373
           MLHMSGNIVD+E+ISRC                         E+P+ +F++ M LA E+K
Sbjct: 1   MLHMSGNIVDKEKISRCLQTLQSTSPSYLLLASLDAARAQLSESPDVVFNQAMALAYEAK 60

Query: 374 ELIKKIPGITWLELPPSFCKFPAKDPLRLTVGFWQLGLSGCKAGDILYRNHGIVPELVES 433
            ++K+IPGI+ LE   SF  FPA DPLRLTVGFW++GLSG +A +ILY ++G+V ELV +
Sbjct: 61  CMLKRIPGISVLE-NSSFPTFPAIDPLRLTVGFWKVGLSGYEADEILYGDYGVVCELVGN 119

Query: 434 RSITLAINLGTCKEHVQRLVSGLEELSASSLKTGTEEKVKNGENIPFTDISMSLNPRDAF 493
           +SIT A NLGTC++HVQRL+SG++ L+A+ +     E+     + PF D   SL PRDAF
Sbjct: 120 KSITYAFNLGTCRDHVQRLLSGIKHLAATYVTIQQPEERVLTVHAPFDDKITSLIPRDAF 179

Query: 494 FAKKRRVSIGES 505
           FA KR+V+I ES
Sbjct: 180 FASKRKVTIKES 191