Jatropha Genome Database

JcCA0317161.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317161.20 - phase: 0 
         (459 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43300.1                                                       696   0.0  
Glyma15g02050.1                                                       694   0.0  
Glyma17g31480.1                                                        55   2e-07

>Glyma13g43300.1 
          Length = 461

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/451 (75%), Positives = 374/451 (82%), Gaps = 12/451 (2%)

Query: 11  KTPTSASSKMLERVLSSRRASPHPDDAVSDNDTLPLSGDESKTKKQS-----LSLLAANY 65
           + P  ++  MLER LSSRR + + DD    +       DESKTKK       ++  A+NY
Sbjct: 17  RHPNLSAPSMLERTLSSRRVNSYADDDADADVDA----DESKTKKNQHILFRITTRASNY 72

Query: 66  LSRLSHXXXXXXXXXXXXXXXXXXXXXXXXFHSRNFVCVSP-FDPAIRVGFFGLDGLESD 124
           LSR++                           SR FVC+S  + P  R GFFG DGL+SD
Sbjct: 73  LSRIAGSGSFYLPCVTIVLFVFFAFSFLFT--SRGFVCISSSYTPVSRAGFFGFDGLDSD 130

Query: 125 FGVLGVPCCRSKHGKKVEWTAKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIAR 184
           FG LGVPCCRSKHGK VEWT+KDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIAR
Sbjct: 131 FGSLGVPCCRSKHGKSVEWTSKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIAR 190

Query: 185 WLKPDLMIESGAFKGHSTWVLRQAMPDMPIISLSPRHPEKYLKKGPAYVDGNCTYFAGKD 244
           WL+PDLMIESGAFKGHSTWVLRQAMPD PIISLSPRHPEKYLKKGPAYVDGNCTY+AGKD
Sbjct: 191 WLEPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDGNCTYYAGKD 250

Query: 245 FVDFGSVEWKSVMKKHGITDLSRVLIFFDDHQNELKRVRQALSAGFRHLVFEDNYDTGTG 304
           FVDFGSV+W +VMKKHGI+DL+RVLIFFDDHQNELKR+ QAL AGFRHLVFEDNYDTGTG
Sbjct: 251 FVDFGSVDWPNVMKKHGISDLNRVLIFFDDHQNELKRIEQALKAGFRHLVFEDNYDTGTG 310

Query: 305 DHYSLRQICDQSYIRGGGHSCFRDSDESRIRSKRKKFWEKAVDVDELCGPNEAWWGVRGW 364
           DHYSLRQICDQSYIRGGGHSCF+DSDE+RIRS+RKKFWEKAVD++ELCGPNEAWWGVRG+
Sbjct: 311 DHYSLRQICDQSYIRGGGHSCFKDSDEARIRSRRKKFWEKAVDIEELCGPNEAWWGVRGY 370

Query: 365 MRDNFNHSNKPISYLEHFQNSRFIESILDVYWELPPVAGPSLTHQTRYDPARTTPPIVED 424
           MRDNFNHSN+PISY +HFQNSR+IESILDVYWELPPVAGPSLTHQTRYDPAR   PIVED
Sbjct: 371 MRDNFNHSNEPISYAQHFQNSRYIESILDVYWELPPVAGPSLTHQTRYDPARAPSPIVED 430

Query: 425 GRYGLFQRIGLGRLENSVFNGYTQMVYLQIS 455
           GRYGLF+R+GL  L+NSVFNGYTQM YLQIS
Sbjct: 431 GRYGLFRRLGLANLDNSVFNGYTQMAYLQIS 461


>Glyma15g02050.1 
          Length = 465

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/453 (74%), Positives = 373/453 (82%), Gaps = 14/453 (3%)

Query: 11  KTPTSASSKMLERVLSSRRASPHPDDAVSDNDTLPLSGDESKTKKQS-----LSLLAANY 65
           + P  ++  MLER LSSRR +         +       DESKTKK       ++  A+NY
Sbjct: 21  RHPNLSAPSMLERTLSSRRVNS------CADGDADGDADESKTKKNQHILFRITTRASNY 74

Query: 66  LSRLSHXXXXXXXXXXXXXXXXXXXXXXXXFHSRNFVCVSP-FDPAIRVGFFGLDGLESD 124
           LSR++                         F SR FVC+S  + P    GFFG DGL+SD
Sbjct: 75  LSRIA--GSGSFYLPCVIILLFIFLAFSFLFTSRGFVCISSSYSPVSGAGFFGFDGLDSD 132

Query: 125 FGVLGVPCCRSKHGKKVEWTAKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIAR 184
           FG LGVPCCRSKHGK VEWT+KDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIA 
Sbjct: 133 FGSLGVPCCRSKHGKTVEWTSKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIAC 192

Query: 185 WLKPDLMIESGAFKGHSTWVLRQAMPDMPIISLSPRHPEKYLKKGPAYVDGNCTYFAGKD 244
           WLKPDLMIESGAFKGHSTWVLRQAMPD PIISLSPRHPEKYLKKGPAYVDGNCTY+AGKD
Sbjct: 193 WLKPDLMIESGAFKGHSTWVLRQAMPDTPIISLSPRHPEKYLKKGPAYVDGNCTYYAGKD 252

Query: 245 FVDFGSVEWKSVMKKHGITDLSRVLIFFDDHQNELKRVRQALSAGFRHLVFEDNYDTGTG 304
           FVDFGS++W +VMKKHGI+DL+RVLIFFDDHQNELKR+ QAL AGFRHLVFEDNYDTGTG
Sbjct: 253 FVDFGSIDWPNVMKKHGISDLNRVLIFFDDHQNELKRIEQALKAGFRHLVFEDNYDTGTG 312

Query: 305 DHYSLRQICDQSYIRGGGHSCFRDSDESRIRSKRKKFWEKAVDVDELCGPNEAWWGVRGW 364
           DHYSLRQICDQSYIRGGGH+CF+DSDE+RIRS+RKKFWEKAVD++ELCGP+EAWWGVRG+
Sbjct: 313 DHYSLRQICDQSYIRGGGHNCFKDSDEARIRSRRKKFWEKAVDIEELCGPDEAWWGVRGF 372

Query: 365 MRDNFNHSNKPISYLEHFQNSRFIESILDVYWELPPVAGPSLTHQTRYDPARTTPPIVED 424
           MRDNFNHSNKPISY +HFQNSR+IESILDVYWELPPVAGPSLTHQTRYDPAR   PIVED
Sbjct: 373 MRDNFNHSNKPISYAQHFQNSRYIESILDVYWELPPVAGPSLTHQTRYDPARAPSPIVED 432

Query: 425 GRYGLFQRIGLGRLENSVFNGYTQMVYLQISEQ 457
           GRYGLF+R+GL  L+NSVFNGYTQMVYLQISEQ
Sbjct: 433 GRYGLFRRLGLANLDNSVFNGYTQMVYLQISEQ 465


>Glyma17g31480.1 
          Length = 177

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/27 (88%), Positives = 26/27 (96%)

Query: 135 SKHGKKVEWTAKDLLKGLEEFVPIYET 161
           SKHGK V+WT+KDLLKGLEEFVPIYET
Sbjct: 46  SKHGKTVKWTSKDLLKGLEEFVPIYET 72