Jatropha Genome Database

JcCA0317081.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.20 + phase: 0 
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16410.2                                                       164   5e-41
Glyma02g16410.1                                                       164   5e-41
Glyma10g03430.2                                                       160   5e-40
Glyma10g03430.1                                                       160   5e-40

>Glyma02g16410.2 
          Length = 137

 Score =  164 bits (415), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 99/122 (81%), Gaps = 1/122 (0%)

Query: 59  KSGAVDFDVLKQHGYKGGMSVLSVPLPKED-TKPDWAWSTGKERREIEAVEESYEQRQKT 117
           KSG +DF+ LK+HGY+GG SVL VP PKED +K DW+WSTGKE+R  + +EESYE+R+KT
Sbjct: 16  KSGVIDFEALKRHGYRGGPSVLKVPAPKEDDSKQDWSWSTGKEKRVDKEIEESYEERKKT 75

Query: 118 RAALLDAERLTNVQTSKEKKNLSFSQKEKRKRDLGQASRGKNFVEEEKRLSRESGIYSGF 177
           R A+   E L    T  +KKN+SFSQKEKRKR+LGQASRGKN+VEEEKRL RE+GIYSGF
Sbjct: 76  REAISLGEELPAALTRNDKKNISFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGF 135

Query: 178 DT 179
           D 
Sbjct: 136 DA 137


>Glyma02g16410.1 
          Length = 163

 Score =  164 bits (415), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 99/122 (81%), Gaps = 1/122 (0%)

Query: 59  KSGAVDFDVLKQHGYKGGMSVLSVPLPKED-TKPDWAWSTGKERREIEAVEESYEQRQKT 117
           KSG +DF+ LK+HGY+GG SVL VP PKED +K DW+WSTGKE+R  + +EESYE+R+KT
Sbjct: 42  KSGVIDFEALKRHGYRGGPSVLKVPAPKEDDSKQDWSWSTGKEKRVDKEIEESYEERKKT 101

Query: 118 RAALLDAERLTNVQTSKEKKNLSFSQKEKRKRDLGQASRGKNFVEEEKRLSRESGIYSGF 177
           R A+   E L    T  +KKN+SFSQKEKRKR+LGQASRGKN+VEEEKRL RE+GIYSGF
Sbjct: 102 REAISLGEELPAALTRNDKKNISFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGF 161

Query: 178 DT 179
           D 
Sbjct: 162 DA 163


>Glyma10g03430.2 
          Length = 163

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 99/123 (80%), Gaps = 1/123 (0%)

Query: 58  RKSGAVDFDVLKQHGYKGGMSVLSVPLPKED-TKPDWAWSTGKERREIEAVEESYEQRQK 116
           +KSG +DF+ LK+HGY+GG SVL VP PKED +K +W+WSTGKE+   + +EESYE+R+K
Sbjct: 41  KKSGLIDFEALKRHGYRGGPSVLKVPAPKEDDSKKNWSWSTGKEKHVDKEIEESYEERKK 100

Query: 117 TRAALLDAERLTNVQTSKEKKNLSFSQKEKRKRDLGQASRGKNFVEEEKRLSRESGIYSG 176
           TR A+   E L    T  +KKNLSFSQKEKRKR+LGQASRGKN+VEEEKRL RE+GIYSG
Sbjct: 101 TREAISLGEELPAALTWNDKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSG 160

Query: 177 FDT 179
           FD 
Sbjct: 161 FDA 163


>Glyma10g03430.1 
          Length = 163

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 99/123 (80%), Gaps = 1/123 (0%)

Query: 58  RKSGAVDFDVLKQHGYKGGMSVLSVPLPKED-TKPDWAWSTGKERREIEAVEESYEQRQK 116
           +KSG +DF+ LK+HGY+GG SVL VP PKED +K +W+WSTGKE+   + +EESYE+R+K
Sbjct: 41  KKSGLIDFEALKRHGYRGGPSVLKVPAPKEDDSKKNWSWSTGKEKHVDKEIEESYEERKK 100

Query: 117 TRAALLDAERLTNVQTSKEKKNLSFSQKEKRKRDLGQASRGKNFVEEEKRLSRESGIYSG 176
           TR A+   E L    T  +KKNLSFSQKEKRKR+LGQASRGKN+VEEEKRL RE+GIYSG
Sbjct: 101 TREAISLGEELPAALTWNDKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSG 160

Query: 177 FDT 179
           FD 
Sbjct: 161 FDA 163