Jatropha Genome Database

JcCA0317081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.10 - phase: 0 
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g06300.1                                                       400   e-112
Glyma17g04930.1                                                       399   e-111
Glyma17g04930.2                                                       311   3e-85
Glyma02g34690.1                                                       223   1e-58
Glyma11g29780.1                                                       113   1e-25
Glyma05g02150.1                                                        49   6e-06

>Glyma18g06300.1 
          Length = 226

 Score =  400 bits (1027), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/226 (84%), Positives = 211/226 (93%)

Query: 1   MEINSDVKDGSLILIKQGAEARVYESTFVGRQSIVKERFSKKYRHPSLDSKLTLKRLNAE 60
           MEI +D +D SL+L+KQGAEARV+ES+FVGR+S+VKERFSKKYRHP+LDSKLTLKRLNAE
Sbjct: 1   MEIEADARDSSLVLLKQGAEARVFESSFVGRKSVVKERFSKKYRHPTLDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVVEERLADIAMQ 120
           ARCMTKARRLGV TPVLYA+DP LHTLTFEYV+G SVKD+FLEF  H V +E L DIA Q
Sbjct: 61  ARCMTKARRLGVCTPVLYAVDPALHTLTFEYVEGPSVKDVFLEFRSHVVNKEWLDDIASQ 120

Query: 121 IGDAIGKLHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IGDAIGKLHDGGLIHGDLTTSNML+++ T QLVLIDFGLSFTSTLPEDKAVDLYVLERAL
Sbjct: 121 IGDAIGKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180

Query: 181 LSMHSSCGNVMDRIIAAYKKSSKQWSSTMNKLAQVRQRGRKRTMVG 226
           +SMHSSCGNVMD+I+AAY+KSSKQWSST+NKLAQVRQRGRKRTMVG
Sbjct: 181 ISMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226


>Glyma17g04930.1 
          Length = 296

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/221 (84%), Positives = 209/221 (94%)

Query: 6   DVKDGSLILIKQGAEARVYESTFVGRQSIVKERFSKKYRHPSLDSKLTLKRLNAEARCMT 65
           + +D SL+L+KQGAEARV+ES+FVGR+S+VKERFSKKYRHP+LDSKLTLKRLN EARCMT
Sbjct: 76  NTRDSSLVLLKQGAEARVFESSFVGRKSVVKERFSKKYRHPTLDSKLTLKRLNMEARCMT 135

Query: 66  KARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVVEERLADIAMQIGDAI 125
           KARRLGV TPVLYA+DP+LHTLTFEYV+G SVKD+FLEFG HGV +ERL DIA QIGD I
Sbjct: 136 KARRLGVWTPVLYAVDPVLHTLTFEYVEGTSVKDVFLEFGSHGVNKERLDDIAFQIGDTI 195

Query: 126 GKLHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHS 185
           GKLHDGGLIHGDLTTSNML+++ T QLVLIDFGLSFTSTLPEDKAVDLYVLERAL+SMHS
Sbjct: 196 GKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERALISMHS 255

Query: 186 SCGNVMDRIIAAYKKSSKQWSSTMNKLAQVRQRGRKRTMVG 226
           SCGNVMD+I+AAY+KSSKQWSST+NKLAQVRQRGRKRTMVG
Sbjct: 256 SCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 296


>Glyma17g04930.2 
          Length = 258

 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 155/221 (70%), Positives = 172/221 (77%), Gaps = 38/221 (17%)

Query: 6   DVKDGSLILIKQGAEARVYESTFVGRQSIVKERFSKKYRHPSLDSKLTLKRLNAEARCMT 65
           + +D SL+L+KQGAEA                                      EARCMT
Sbjct: 76  NTRDSSLVLLKQGAEA--------------------------------------EARCMT 97

Query: 66  KARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVVEERLADIAMQIGDAI 125
           KARRLGV TPVLYA+DP+LHTLTFEYV+G SVKD+FLEFG HGV +ERL DIA QIGD I
Sbjct: 98  KARRLGVWTPVLYAVDPVLHTLTFEYVEGTSVKDVFLEFGSHGVNKERLDDIAFQIGDTI 157

Query: 126 GKLHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHS 185
           GKLHDGGLIHGDLTTSNML+++ T QLVLIDFGLSFTSTLPEDKAVDLYVLERAL+SMHS
Sbjct: 158 GKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERALISMHS 217

Query: 186 SCGNVMDRIIAAYKKSSKQWSSTMNKLAQVRQRGRKRTMVG 226
           SCGNVMD+I+AAY+KSSKQWSST+NKLAQVRQRGRKRTMVG
Sbjct: 218 SCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 258


>Glyma02g34690.1 
          Length = 172

 Score =  223 bits (569), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 120/196 (61%), Positives = 141/196 (71%), Gaps = 30/196 (15%)

Query: 32  QSIVKERFSKKYRHPSLDSKLTLKRLNAE-ARCMTKARRLGVSTPVLYALDPLLHTLTFE 90
           + +VKE FSKKY HP+LDSKLTLK LNA+ ARC TKAR+LGV TP+LY + P+LHTLTFE
Sbjct: 6   RCVVKEHFSKKYSHPTLDSKLTLKHLNAQDARCKTKARKLGVCTPMLYIVGPVLHTLTFE 65

Query: 91  YVDGHSVKDIFLEFGLHGVVEERLADIAMQIGDAIGKLHDGGLIHGDLTTSNMLIRNGTN 150
           YV+G SVKD+FLEFG   V +E + +IA QIG AIGKLHD GL+HG   +          
Sbjct: 66  YVEGPSVKDVFLEFGSRDVDKECMDNIASQIGHAIGKLHDCGLVHGPAISQ--------- 116

Query: 151 QLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRIIAAYKKSSKQWSSTMN 210
               +DF             V L VLERA+LSMHSSCGNV   I+AAY+KSSKQ SST+N
Sbjct: 117 ----VDF-------------VYLCVLERAILSMHSSCGNV---ILAAYRKSSKQCSSTLN 156

Query: 211 KLAQVRQRGRKRTMVG 226
           KLAQV+QRGRKRTMVG
Sbjct: 157 KLAQVQQRGRKRTMVG 172


>Glyma11g29780.1 
          Length = 73

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 61/68 (89%)

Query: 128 LHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSC 187
           LHDGGLIHGDLTTSNML ++ T QLVLIDFGLSFTSTLP+DK V LYV+ERAL+SMHSSC
Sbjct: 1   LHDGGLIHGDLTTSNMLSKSHTKQLVLIDFGLSFTSTLPKDKPVHLYVVERALISMHSSC 60

Query: 188 GNVMDRII 195
           GNV+ ++ 
Sbjct: 61  GNVVSKLF 68


>Glyma05g02150.1 
          Length = 352

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 6/120 (5%)

Query: 45  HPSLDSKLTL---KRLNAEARCMTKARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIF 101
            P  D  L +   K+  +E   + + R   + T V     P +  +  EY+ G S++   
Sbjct: 88  QPEEDEDLAVLLEKQFTSEVALLFRLRHPNIITFVAACKKPPVFCIITEYLAGGSLRKYL 147

Query: 102 LEFGLHGVVEERLADIAMQIGDAIGKLHDGGLIHGDLTTSNMLIRNGTNQLVLI-DFGLS 160
           ++ G H V  + +  +A+ I   +  LH  G++H DL + N+L+  G +  V + DFG+S
Sbjct: 148 VQQGPHSVTHKVVLKLALDIARGMQYLHSQGILHRDLKSENLLL--GEDLCVKVADFGIS 205