Jatropha Genome Database

JcCA0317001.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317001.30 + phase: 0 
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36790.1                                                       302   2e-82
Glyma11g08510.1                                                       239   1e-63
Glyma02g24510.1                                                       200   8e-52
Glyma06g20770.1                                                       101   8e-22
Glyma15g21560.1                                                        86   4e-17
Glyma01g32100.1                                                        74   9e-14
Glyma16g23830.1                                                        54   2e-07
Glyma19g42540.2                                                        53   3e-07
Glyma11g19970.2                                                        52   8e-07
Glyma11g19970.1                                                        52   8e-07
Glyma15g01800.1                                                        48   8e-06

>Glyma01g36790.1 
          Length = 231

 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/231 (66%), Positives = 176/231 (76%), Gaps = 19/231 (8%)

Query: 7   DEEPSDR-HMSTISRHAFGDDEEQPAFSISIIENMKEEYGLFVWPCSVILAEYVWQQRDR 65
           DE+  D   M+T+S+H FGDD E P+FSISIIENMKE+YGLFVWPCSV+LAEY+WQ + R
Sbjct: 9   DEQCDDTLTMTTVSQHFFGDDSETPSFSISIIENMKEDYGLFVWPCSVVLAEYIWQHKHR 68

Query: 66  FSGARVVELGAGTSLPGLTAAKLGSDVTLTDDSNRLEVLDNIRKVCNLNKLKCNVLGLTW 125
           FSGA VVELGAGTSLPGL AAKLG+ VTLTDDS RLEVLDN+R+          VLGLTW
Sbjct: 69  FSGATVVELGAGTSLPGLVAAKLGARVTLTDDSTRLEVLDNMRR----------VLGLTW 118

Query: 126 GIWDEAIFSLKPTIILGADVLYEASXXXXXX--------XXXXXXXQNSPGSVLITTYHN 177
           G+WD +IFSL+PTIILGADVLY++                      +NSPGS  IT+YHN
Sbjct: 119 GVWDSSIFSLQPTIILGADVLYDSKVLFLMYYLAFDNLFATVTFLLRNSPGSTFITSYHN 178

Query: 178 RSGHHLIEFLMVKWGLKCVKLLDGFSFMPSYKASGLNGNIQLAEIVLNSKN 228
           RSGHHLIEFLM KWGLKC+KLLDGFSF+P  KAS L+GNIQLAEI L SK+
Sbjct: 179 RSGHHLIEFLMGKWGLKCLKLLDGFSFLPPDKASLLSGNIQLAEIGLISKD 229


>Glyma11g08510.1 
          Length = 244

 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/237 (53%), Positives = 160/237 (67%), Gaps = 24/237 (10%)

Query: 1   MQGKDGDEEPSDRHMSTISRHAFGDDEEQPAFSISIIENMKEEYGLFVWPCSVILAEYVW 60
           M+ KD +++     M+T+S+H F DD E P+F ISIIENMK+EYGLF+WPCSV+LAEYVW
Sbjct: 1   MEEKDWNDDSLT--MTTVSQHCFRDDSEAPSFYISIIENMKDEYGLFLWPCSVVLAEYVW 58

Query: 61  QQRDRFSGARVVELGAGTSLPGLTAAKLGSDVTLTDDSNRLEVLDNIRKVCNLNKLKCNV 120
           Q + RFSGA VVE+     LP LT  +           N + VL+N+R+VC+LNKL+CNV
Sbjct: 59  QHKHRFSGANVVEV---LELPCLTWLQ----------QNSVPVLNNMRRVCDLNKLECNV 105

Query: 121 LGLTWGIWDEAIFS-------LKPTIILGADVLYEASXXXX--XXXXXXXXXQNSPGSVL 171
           LGLTWG+WD ++F        L P+ +    VL+                  +NSPGS  
Sbjct: 106 LGLTWGVWDSSLFKKMGCVNYLSPSSVYWTKVLFLMYYLAFDNLFATVTFLFRNSPGSTF 165

Query: 172 ITTYHNRSGHHLIEFLMVKWGLKCVKLLDGFSFMPSYKASGLNGNIQLAEIVLNSKN 228
           IT+YHNRSGHHLIEFL+ KWGL+C+KLLDGFSF+ S KAS L+GNIQLAEI L SK+
Sbjct: 166 ITSYHNRSGHHLIEFLIGKWGLECLKLLDGFSFLASDKASLLSGNIQLAEISLISKD 222


>Glyma02g24510.1 
          Length = 191

 Score =  200 bits (509), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/219 (49%), Positives = 134/219 (61%), Gaps = 42/219 (19%)

Query: 1   MQGKDGDEEPSDRHMSTISRHAFGDDEEQPAFSISIIENMKEEYGLFVWPCSVILAEYVW 60
           M+ KD +++     M+T+S H F DD + P+FSISIIENMK+EYGLF+WPC+V+L EYVW
Sbjct: 1   MEEKDWNDD--SLTMTTVSHHCFSDDSKAPSFSISIIENMKDEYGLFLWPCNVVLVEYVW 58

Query: 61  QQRDRFSGARVVELGAGTSLPGLTAAKLGSDVTLTDDSNRLEVLDNIRKVCNLNKLKCNV 120
           Q   RFSGA VVE+     LP L   +  S                             V
Sbjct: 59  QHNHRFSGANVVEV---LELPCLAWLQQNS-----------------------------V 86

Query: 121 LGLTWGIWDEAIFSLKPTIILGADVLYEASXXXXXX--------XXXXXXXQNSPGSVLI 172
           LGLTWG+WD +IFSL+ TIILGADVLY+++                     +NSPGS  I
Sbjct: 87  LGLTWGVWDSSIFSLQSTIILGADVLYDSNVLFLMYYLAFDNLFATVTFLFRNSPGSTYI 146

Query: 173 TTYHNRSGHHLIEFLMVKWGLKCVKLLDGFSFMPSYKAS 211
           T+YHNRSGHHLIEF + KWGL+C+KLLDGFSF+PS KAS
Sbjct: 147 TSYHNRSGHHLIEFWVGKWGLECLKLLDGFSFLPSDKAS 185


>Glyma06g20770.1 
          Length = 153

 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 54/71 (76%)

Query: 4  KDGDEEPSDRHMSTISRHAFGDDEEQPAFSISIIENMKEEYGLFVWPCSVILAEYVWQQR 63
          K+ D    +  M+ +S+H FGDD E P+FSISIIENMK+EYGLF+WPCSV+L EYVWQ  
Sbjct: 2  KEKDWNDDNLTMTIVSQHCFGDDSEAPSFSISIIENMKDEYGLFLWPCSVVLTEYVWQHN 61

Query: 64 DRFSGARVVEL 74
           RFS A VVE+
Sbjct: 62 HRFSEASVVEV 72


>Glyma15g21560.1 
          Length = 144

 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 85/180 (47%), Gaps = 61/180 (33%)

Query: 72  VELGAGTSLPGLTAAKLGSDVTLTDDSNRLE-------------------VLDNIRKVCN 112
           ++LGAGTSLPGL A KLG+ VT + DS +L+                   VLDN+ +VC+
Sbjct: 1   MQLGAGTSLPGLAAEKLGAYVTFSYDSTKLKYSQINYCQPPSTWINWYMIVLDNMTRVCD 60

Query: 113 LNKLKCNVLG----LTWGIWDEAIFSLKPTIILGADVLYEASXXXXXXXXXXXXXQNSPG 168
           LNKLKCN L      T   +    ++L P+                              
Sbjct: 61  LNKLKCNPLCHYDFPTPKFFGVNFYNLIPS-----------------------------S 91

Query: 169 SVLITTYHNRSGHHLIEFLMVKWGLKCVKLLDGFSFMPSYKASGLNGNIQLAEIVLNSKN 228
            V+   Y    G         K GLKC+ LLDGFSF+PS K S L+GNIQ+AEI L SK+
Sbjct: 92  KVIFILYEVFDG---------KRGLKCLMLLDGFSFLPSDKVSLLSGNIQMAEIGLISKD 142


>Glyma01g32100.1 
          Length = 156

 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 7/87 (8%)

Query: 15  MSTISRHAFGDDEEQPAFSISIIENMKEEYGLFVWPCSVILAEYVWQQRDRFSGARVVEL 74
           M+ +S H F +D E P+FSISIIENMK+EY LF       L    +Q+        +   
Sbjct: 13  MTIVSHHCFDNDSEAPSFSISIIENMKDEYVLF-------LTIIDFQEPTLLRYPLISNS 65

Query: 75  GAGTSLPGLTAAKLGSDVTLTDDSNRL 101
            AGTSL GL AAKLG+ VTLTDD  RL
Sbjct: 66  CAGTSLLGLVAAKLGACVTLTDDFTRL 92


>Glyma16g23830.1 
          Length = 271

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 45  GLFVWPCSVILAEYVWQQRDR----FSGARVVELGAGTSLPGLTAAKLGSDVTLTDDSNR 100
           G  +W   V+L +++    D       G ++VELG+G  L G  A  LGS+V +TD  +R
Sbjct: 89  GAVMWDSGVVLGKFLEHAVDSGMLVLQGKKIVELGSGCGLVGCIATLLGSEVIVTDLPDR 148

Query: 101 LEVL-DNIRKVCNLNKLKCNVLG--LTWG-IWDEAIFSLKPTIILGADVLY 147
           L +L  NI        L+ +V    LTWG   D  +   KP  ++G+DV+Y
Sbjct: 149 LRLLRKNIETNMKHVSLRGSVTATELTWGEDPDPELIDPKPDFVIGSDVVY 199


>Glyma19g42540.2 
          Length = 404

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 19/135 (14%)

Query: 31  AFSISIIENMKE-EYGLFVWPCSVILAEYVWQQRDRFSGARVVELGAGTSLPGLTAAKL- 88
            FS+    NM E + G  +WP S+ L+E +    + FS     E+G+G  L GL  A + 
Sbjct: 134 VFSLQCSLNMLEGDTGCSIWPSSLFLSELILSHPELFSNKSCFEIGSGVGLVGLCLAHVK 193

Query: 89  GSDVTLTD-------------DSNRLEVLDN-IRKVCNLNKLKCNVLGLTWGIWDEA-IF 133
            S V L+D             + N L V D+ +++  + N +KC  L L W    E+ + 
Sbjct: 194 ASKVILSDGDLSTLANMKFNLELNHLNVEDDMLQRNKDPNMVKC--LHLPWESASESQLQ 251

Query: 134 SLKPTIILGADVLYE 148
            + P ++LGADV+Y+
Sbjct: 252 DIMPDVVLGADVIYD 266


>Glyma11g19970.2 
          Length = 304

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 20/121 (16%)

Query: 45  GLFVWPCSVILAEYVWQ--QRDRFS-----GARVVELGAGTSLPGLTAAKLGSDVTLTDD 97
           G  VW  S++ A+++ +  ++ RFS     G RV+ELGAG  + G+  A LG DV +TD 
Sbjct: 35  GTTVWDASLVFAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGIGMALLGCDVIVTDQ 94

Query: 98  SNRLEVLD-----NIRKVCNLNKL---KCNVLGLTWGIWDEA-IFSLKPTI--ILGADVL 146
              L +L      NI ++   N        V  L WG  DE+ I ++ P    I+G DV+
Sbjct: 95  KEVLPLLQRNVERNISRIMQKNPDSFGSIKVAELQWG--DESHIKAVGPPFDYIIGTDVV 152

Query: 147 Y 147
           Y
Sbjct: 153 Y 153


>Glyma11g19970.1 
          Length = 304

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 20/121 (16%)

Query: 45  GLFVWPCSVILAEYVWQ--QRDRFS-----GARVVELGAGTSLPGLTAAKLGSDVTLTDD 97
           G  VW  S++ A+++ +  ++ RFS     G RV+ELGAG  + G+  A LG DV +TD 
Sbjct: 35  GTTVWDASLVFAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGIGMALLGCDVIVTDQ 94

Query: 98  SNRLEVLD-----NIRKVCNLNKL---KCNVLGLTWGIWDEA-IFSLKPTI--ILGADVL 146
              L +L      NI ++   N        V  L WG  DE+ I ++ P    I+G DV+
Sbjct: 95  KEVLPLLQRNVERNISRIMQKNPDSFGSIKVAELQWG--DESHIKAVGPPFDYIIGTDVV 152

Query: 147 Y 147
           Y
Sbjct: 153 Y 153


>Glyma15g01800.1 
          Length = 308

 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 15/122 (12%)

Query: 20  RHAFGDDEEQPAFSISIIENMKEE---YGLFVWPCSVILAEYVWQQRDRFSGARVV---E 73
           R A  +   Q +FS+ I  N+       GL VW   ++L++++  +    S    V   E
Sbjct: 46  RTAMFEANAQHSFSVRIQHNITSSIPNVGLQVWRAELLLSDFILHKASSSSQLHQVIALE 105

Query: 74  LGAGTSLPGLTAAKLGSDVTLTDDSNRLEVLDNIRKVCNLN------KLKCNVLGLTW-G 126
           LGAGT L GL  A++ + V LTD     E+LDN  K   LN      + K  V  L W G
Sbjct: 106 LGAGTGLVGLLLARVANAVFLTDHGT--EILDNCAKNVQLNFGLLNYQAKIYVRELDWFG 163

Query: 127 IW 128
            W
Sbjct: 164 CW 165