Jatropha Genome Database

JcCA0316871.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316871.30 - phase: 0 
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03410.1                                                       216   4e-57
Glyma05g36240.1                                                       213   3e-56
Glyma13g42810.1                                                       182   8e-47
Glyma15g02630.1                                                        99   1e-21
Glyma03g07220.1                                                        92   1e-19

>Glyma08g03410.1 
          Length = 122

 Score =  216 bits (550), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 102/121 (84%), Positives = 110/121 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL +LQS ACQAS+FV+  GT YY+QLLEQNKQ+IQEP TVEKCNLL+KQLFYTRLA
Sbjct: 1   MASKLQKLQSAACQASQFVSSRGTNYYRQLLEQNKQHIQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP R ESFWKELDYVKNLWKNR+ELKVEDAGIAALFGLECF W+C GEIVGRGFT TGY
Sbjct: 61  SIPGRNESFWKELDYVKNLWKNRKELKVEDAGIAALFGLECFAWYCGGEIVGRGFTFTGY 120

Query: 121 Y 121
           Y
Sbjct: 121 Y 121


>Glyma05g36240.1 
          Length = 122

 Score =  213 bits (543), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 102/121 (84%), Positives = 109/121 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL +LQ+ A QAS+FV   GT YYKQLLEQNKQ+IQEP TVEKCNLL+KQLFYTRLA
Sbjct: 1   MASKLQKLQATASQASQFVCSRGTNYYKQLLEQNKQHIQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP+R ESFWKELDY KNLWKNR+ELKVEDAGIAALFGLECF WFCAGEIVGRGFT TGY
Sbjct: 61  SIPSRNESFWKELDYAKNLWKNRKELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 121
           Y
Sbjct: 121 Y 121


>Glyma13g42810.1 
          Length = 122

 Score =  182 bits (461), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 97/121 (80%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASK+ QLQSK  QAS+    HG +YY+ LL+QNK YIQ+P T+EKC  L+KQLFYTRLA
Sbjct: 1   MASKIPQLQSKVNQASQAAKNHGASYYRLLLDQNKHYIQDPPTIEKCQSLAKQLFYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP+RY SFWKELD+ KNL KNRQ+L +E  G AALFGLECF WF  GEIVGRGFT TGY
Sbjct: 61  SIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWFWGGEIVGRGFTFTGY 120

Query: 121 Y 121
           Y
Sbjct: 121 Y 121


>Glyma15g02630.1 
          Length = 131

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 50/63 (79%)

Query: 59  LASIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTIT 118
           L +IP+RY SFWKELD+ KNL KNRQ+L +E  G AALFGLECF WF  GEIVGRG T T
Sbjct: 68  LYTIPHRYNSFWKELDHAKNLVKNRQDLNMEKVGFAALFGLECFAWFWGGEIVGRGCTFT 127

Query: 119 GYY 121
           GYY
Sbjct: 128 GYY 130


>Glyma03g07220.1 
          Length = 79

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 46/61 (75%)

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP+RY S WKELD+ KNL KNRQ+L +E    AALFGLECF WF  GEIVGRG T T Y
Sbjct: 18  SIPHRYNSLWKELDHAKNLVKNRQDLNLEKVSFAALFGLECFAWFWGGEIVGRGCTFTSY 77

Query: 121 Y 121
           Y
Sbjct: 78  Y 78