Jatropha Genome Database

JcCA0316581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316581.10 - phase: 0 
         (398 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43060.1                                                       511   e-145
Glyma18g10830.1                                                       285   9e-77
Glyma18g10860.1                                                       249   4e-66

>Glyma08g43060.1 
          Length = 400

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/396 (61%), Positives = 301/396 (76%), Gaps = 1/396 (0%)

Query: 1   MEKLRRVVNEIAYTRDQAKLSTLQRSFIPVLSFASSFYAVALALRRYLYHFGLFSKHRLP 60
           MEKLRRVVNEIAY +  + L  L RS +P LS ASS Y +A++LR  LY    F  HRLP
Sbjct: 2   MEKLRRVVNEIAYAQTLSHLPPLHRSLVPFLSIASSLYKLAVSLRCSLYQRRFFQLHRLP 61

Query: 61  VPVISVGNLTWGGNGKTPMVEFIAQLLADSGISPLILTRGYAGGDEARMVTRHLIGTPAK 120
           VPVISVGNL+WGGNGKTPMVEFIA      GISPL+L+RGY GGDE  M+ RHL+GTP K
Sbjct: 62  VPVISVGNLSWGGNGKTPMVEFIALCFCHYGISPLVLSRGYGGGDEVNMLRRHLLGTPTK 121

Query: 121 IGIGANRAATAAGFFKRYGYTDPRNYSSKET-WVDQEVGSRLDSGKISALVLDDGMQHWS 179
            G+GANRAA A+ F ++YGY D    S  E  ++D++V   +DS KI  +VLDD MQHWS
Sbjct: 122 FGVGANRAAVASRFIQKYGYVDIGKSSWHEKQYLDEKVQDSVDSEKIGVVVLDDAMQHWS 181

Query: 180 LQRDLEIVMVNGLSPWGNCQLIPLGPLREPLTALRRADVAVVHHANLVSEQNLQDIEIMI 239
           L RDL+IVMVNGL+ WGN QL+P GPLREPLTALRRAD  V+HHA+LVSE  L+ IE M+
Sbjct: 182 LWRDLDIVMVNGLTLWGNLQLLPRGPLREPLTALRRADAVVIHHADLVSEHTLKYIESMV 241

Query: 240 RGVKDSLPIFFTRMSPSYFFEVGNINFRIPLDVIHDAIVLCVSAIGSANAFVLEMKQLGA 299
            G+K S+PIF T++ P+Y FEVG IN +IPL  +H+  +LCVSAIGSA  FV +++++GA
Sbjct: 242 LGIKKSVPIFLTKLDPTYLFEVGTINAKIPLTALHETNILCVSAIGSAEPFVKQIQKMGA 301

Query: 300 FYVDRIDFSDHHLFQTRDIEVIMMKLRELENKFGSKPVVVVTEKDYDRDPEILRCLNPFK 359
            YVDRIDFSDHH+F  RDIE+I  KL EL+ KF  KP+VV+TEKDYDRDPEIL+ L+PFK
Sbjct: 302 LYVDRIDFSDHHIFHARDIEMIRAKLGELDGKFVPKPIVVMTEKDYDRDPEILKQLHPFK 361

Query: 360 VMTLCSELQIIPRRGSTKDGFRKLLKELLKIECSGA 395
           V  LCS L+++P RGST+D F+K LK+ LK+E   A
Sbjct: 362 VFVLCSALKVLPYRGSTEDSFKKFLKDHLKLELPPA 397


>Glyma18g10830.1 
          Length = 296

 Score =  285 bits (728), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 148/264 (56%), Positives = 182/264 (68%), Gaps = 16/264 (6%)

Query: 95  LILTR-GYAGGDEARMVTRHLIGTPAKIGIGANRAATAAGFFKRYGYTDPRNYSSKET-W 152
           L L R GY GGDE  M+ RHL+GT  K G+GANRA  A+ F ++YGY D    S  E  +
Sbjct: 34  LFLVRSGYGGGDEVNMLRRHLLGTSTKFGVGANRAVVASHFIQKYGYIDIGKSSWHEKQY 93

Query: 153 VDQEVGSRLDSGKISALVLDDGMQHWSLQRDLEIVMVNGLSPWGNCQLIPLGPLREPLTA 212
           +DQ+V   LDS KI  +VLDD MQ  +L+RDL+IVMVN L+ WGN QL+P GPL EPLTA
Sbjct: 94  LDQKVQDSLDSEKIGVVVLDDAMQ-VALERDLDIVMVNELTLWGNLQLLPRGPLMEPLTA 152

Query: 213 LRRADVAVVHHANLVSEQNLQDIEIMIRGVKDSLPIFFTRMSPSYFFEVGNINFRIPLDV 272
           LRRAD  V+HHA+LVSE  L+DIE M+ G+  S+PIF T+M P+Y FEVG IN +IPL  
Sbjct: 153 LRRADEVVIHHADLVSEHTLKDIESMVLGINKSVPIFLTKMDPTYLFEVGTINAKIPLTA 212

Query: 273 IHDAIVLCVSAIGSANAFVLEMKQLGAFYVDRI-------------DFSDHHLFQTRDIE 319
           +H+A VLCVSAIGSA  FV  +++L    V  I             +FSDHH+F  RDIE
Sbjct: 213 LHEATVLCVSAIGSAKPFVKLIQKLLVTTVYYILYTREGSSTELKDNFSDHHIFHARDIE 272

Query: 320 VIMMKLRELENKFGSKPVVVVTEK 343
           +I  KL ELE KFGSKP+VV+TEK
Sbjct: 273 MIRAKLGELEGKFGSKPIVVITEK 296


>Glyma18g10860.1 
          Length = 264

 Score =  249 bits (635), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 121/218 (55%), Positives = 154/218 (70%), Gaps = 5/218 (2%)

Query: 100 GYAGGDEARMVTRHLIGTPAKIGIGANRAATAAGFFKRYGYTDPRNYSSKE-TWVDQEVG 158
           GY GGDE  M+ R L+GTP K G+GAN A  A+ F ++YG  D    S  E  ++DQ+V 
Sbjct: 1   GYGGGDEVNMLRRLLLGTPTKFGVGANGAGVASHFIQKYGCIDIDKSSWHEKQYLDQKVQ 60

Query: 159 SRLDSGKISALVLDDGMQHWSLQRDLEIVMVNGLSPWGNCQLIPLGPLREPLTALRRADV 218
             LDS K+  +VLDD MQ   L    +IV VNGL+ WGN QL+P GPLREPLTALRRAD 
Sbjct: 61  DSLDSEKVGVVVLDDAMQLIYL----DIVRVNGLTLWGNLQLLPCGPLREPLTALRRADA 116

Query: 219 AVVHHANLVSEQNLQDIEIMIRGVKDSLPIFFTRMSPSYFFEVGNINFRIPLDVIHDAIV 278
            V+HHA+LVSE  L+DIE ++ G++ S+PIF  +M P+Y FEVG IN +I L  +H+A +
Sbjct: 117 VVIHHADLVSEHTLKDIESIVLGIEKSVPIFLIKMDPTYLFEVGTINVKILLTALHEATI 176

Query: 279 LCVSAIGSANAFVLEMKQLGAFYVDRIDFSDHHLFQTR 316
           LCVSAIGSA  FV +++++GA YVDRIDFSDHHL   R
Sbjct: 177 LCVSAIGSAEPFVKQIQKMGALYVDRIDFSDHHLLLAR 214