Jatropha Genome Database

JcCA0316351.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316351.20 + phase: 0 
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g04330.1                                                       176   6e-45
Glyma11g12120.1                                                       174   2e-44
Glyma06g03040.1                                                       171   2e-43
Glyma15g04970.1                                                       155   1e-38
Glyma13g40430.1                                                       153   5e-38
Glyma11g15730.1                                                       149   1e-36
Glyma12g07740.1                                                       142   8e-35
Glyma04g03010.1                                                        76   1e-14
Glyma09g24230.1                                                        60   5e-10
Glyma03g37220.1                                                        59   2e-09
Glyma15g20590.1                                                        54   6e-08

>Glyma12g04330.1 
          Length = 818

 Score =  176 bits (446), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 97/124 (78%), Gaps = 1/124 (0%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDLFRSE MQLVQLIIPIESAH TVSYLGDLGLLQFKDLNA+KSPFQRTYAAQIK+CGEM
Sbjct: 13  MDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCGEM 72

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           AR LRFFK+QM KAG SP   S T  ++++D               MNAN +KLQR+YNE
Sbjct: 73  ARGLRFFKDQMLKAGVSP-KYSTTPVDLNIDDLEVKLTEIESELTEMNANGEKLQRSYNE 131

Query: 121 LIEY 124
           L+EY
Sbjct: 132 LVEY 135


>Glyma11g12120.1 
          Length = 818

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 97/124 (78%), Gaps = 1/124 (0%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDLFRSE MQLVQLIIPIESAH TVSYLGDLGLLQFKDLNA+KSPFQRTYAAQI++ GEM
Sbjct: 13  MDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIRRSGEM 72

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           AR+LRFFKEQM KAG SP   S T  ++++D               MNAN +KLQR+YNE
Sbjct: 73  ARRLRFFKEQMLKAGVSP-KYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSYNE 131

Query: 121 LIEY 124
           L+EY
Sbjct: 132 LVEY 135


>Glyma06g03040.1 
          Length = 815

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 96/124 (77%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE MQLVQLIIPIESAH ++SYLGDLGL+QFKDLNA+KSPFQRTYA+QIK+CGEM
Sbjct: 11  MDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLIQFKDLNADKSPFQRTYASQIKRCGEM 70

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           AR+LR FKEQM KAG SPS+ S    + D++               +NANN+KLQ TYNE
Sbjct: 71  ARRLRLFKEQMTKAGVSPSTWSTRDNHFDLEHLEVKLEELEAELLEINANNEKLQHTYNE 130

Query: 121 LIEY 124
           L+EY
Sbjct: 131 LLEY 134


>Glyma15g04970.1 
          Length = 819

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 93/124 (75%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE M  VQLIIP+ESAH  +SYLG+LGLLQF+DLNA+KSPFQRT+  Q+K+C EM
Sbjct: 11  MDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEM 70

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           +RKLRFFK+Q+ KAG   SS++V Q +ID++               MN+N+DKLQ++YNE
Sbjct: 71  SRKLRFFKDQISKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLQQSYNE 130

Query: 121 LIEY 124
           L E+
Sbjct: 131 LQEF 134


>Glyma13g40430.1 
          Length = 820

 Score =  153 bits (387), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 93/124 (75%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE M  VQLIIP ESAH  +SYLG+LGLLQF+DLNA+KSPFQRT+  Q+K+CGEM
Sbjct: 11  MDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCGEM 70

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           +RKLRFFK+Q+ KAG   SS++  Q +ID++               MN+N+DKL+++YNE
Sbjct: 71  SRKLRFFKDQISKAGLMSSSRTELQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNE 130

Query: 121 LIEY 124
           L+E+
Sbjct: 131 LLEF 134


>Glyma11g15730.1 
          Length = 818

 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 93/124 (75%), Gaps = 1/124 (0%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSEAM  VQLIIP ESAH  ++YLG+LGLLQF+DLNAEKSPFQRT+  Q+K+C EM
Sbjct: 11  MDLMRSEAMTFVQLIIPAESAHRAITYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEM 70

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           +RKLRFFK+Q+ KAG   SS SV Q++I ++               MN+N++KLQ++YNE
Sbjct: 71  SRKLRFFKDQINKAGLM-SSPSVLQSDIYLEDLEIQLAEHEHELIEMNSNSEKLQQSYNE 129

Query: 121 LIEY 124
           L+E+
Sbjct: 130 LLEF 133


>Glyma12g07740.1 
          Length = 818

 Score =  142 bits (359), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE M  VQLIIP ESAH  ++YLG+LGLLQF+DLNAEKSPFQR +  Q+K+C EM
Sbjct: 11  MDLMRSETMTFVQLIIPAESAHRAINYLGELGLLQFRDLNAEKSPFQRIFVNQVKRCAEM 70

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           +RKLRFF++Q+ KAG   SS SV QT+I ++               MN+N++KL+++YNE
Sbjct: 71  SRKLRFFEDQINKAGLM-SSPSVLQTDIYLEDLEIQLAEHEHELIEMNSNSEKLRQSYNE 129

Query: 121 LIEY 124
           L+E+
Sbjct: 130 LLEF 133


>Glyma04g03010.1 
          Length = 829

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 45/71 (63%)

Query: 54  IKKCGEMARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDK 113
           IK+CGEMAR+LR FKEQM KAG SPS  S    + D++               +NANN+K
Sbjct: 35  IKRCGEMARRLRLFKEQMTKAGVSPSMWSTRDDHFDLEHLEVKLEELEAELLEINANNEK 94

Query: 114 LQRTYNELIEY 124
           LQ TYNEL+EY
Sbjct: 95  LQHTYNELLEY 105


>Glyma09g24230.1 
          Length = 221

 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 32/44 (72%)

Query: 1  MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKS 44
          MDL RSE M  VQLIIP+ES H  +SYLG L LLQF+D+   KS
Sbjct: 11 MDLMRSEKMTFVQLIIPVESTHRAISYLGKLDLLQFRDVYVNKS 54


>Glyma03g37220.1 
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 60  MARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYN 119
           MAR+LRFFKEQM KAG SP   S T  ++++D               MNAN +KLQR+Y+
Sbjct: 1   MARRLRFFKEQMLKAGVSPKY-STTPIDVNIDEIEVKLTEIELELTEMNANGEKLQRSYD 59

Query: 120 ELI 122
           EL+
Sbjct: 60  ELV 62


>Glyma15g20590.1 
          Length = 178

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 29/37 (78%)

Query: 9   MQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSP 45
           M  VQLIIP+ESAH  +SYLG+LGLLQF+D++    P
Sbjct: 115 MTFVQLIIPVESAHRAISYLGELGLLQFRDVSFLSDP 151