Jatropha Genome Database

JcCA0316161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316161.10 + phase: 0 
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24040.1                                                       415   e-116
Glyma07g32560.2                                                       414   e-116
Glyma07g32560.1                                                       414   e-116
Glyma13g24040.2                                                       382   e-106
Glyma02g10150.1                                                        64   1e-10
Glyma18g52810.1                                                        59   4e-09
Glyma02g10150.2                                                        56   3e-08

>Glyma13g24040.1 
          Length = 243

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/249 (84%), Positives = 221/249 (88%), Gaps = 17/249 (6%)

Query: 2   EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61
           +KNKYSII+PTYNERLNI LIVYLIFKHL D DFEII+VDDGSPDGTQ+VVKQLQQVYGE
Sbjct: 8   QKNKYSIIVPTYNERLNIGLIVYLIFKHLGDADFEIIIVDDGSPDGTQDVVKQLQQVYGE 67

Query: 62  DRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 121
           DRILLR RP+KLGLGTAY+HG+KHASGNFVVIMDADLSHHPKYLPSFI+KQ ETGA IVT
Sbjct: 68  DRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPSFIRKQSETGADIVT 127

Query: 122 GTRYVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 181
           GTRYVKGGGVHGWNLMRKLTSRGANVLA TLLWPGVSDLTGSFRLY+KSVLEDIIS  VS
Sbjct: 128 GTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKSVLEDIISCCVS 187

Query: 182 KGYVFQMEMIVRASRKGYHIEE-PLA---RLFFTGSKLLLLIEFLEVPKLGGSEIVEYLK 237
           KGYVFQMEMIVRASRKGYHIEE P+    R+F  GS            KLGGSEIVEYLK
Sbjct: 188 KGYVFQMEMIVRASRKGYHIEEVPITFVDRVF--GSS-----------KLGGSEIVEYLK 234

Query: 238 GLAYLLVTT 246
           GLAYLLVTT
Sbjct: 235 GLAYLLVTT 243


>Glyma07g32560.2 
          Length = 243

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/249 (83%), Positives = 221/249 (88%), Gaps = 17/249 (6%)

Query: 2   EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61
           +KNKYSII+PTYNERLNI LIVYLIFKHL D DFEII+VDDGSPDGTQ+VVKQLQQVYGE
Sbjct: 8   QKNKYSIIVPTYNERLNIGLIVYLIFKHLGDADFEIIIVDDGSPDGTQDVVKQLQQVYGE 67

Query: 62  DRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 121
           DRILLR RP+KLGLGTAY+HG+KHASGNFVVIMDADLSHHPKYLP+FI+KQ ETGA IVT
Sbjct: 68  DRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPNFIRKQSETGADIVT 127

Query: 122 GTRYVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 181
           GTRYVKGGGVHGWNLMRKLTSRGANVLA TLLWPGVSDLTGSFRLY+KSVLEDIIS  VS
Sbjct: 128 GTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKSVLEDIISCCVS 187

Query: 182 KGYVFQMEMIVRASRKGYHIEE-PLA---RLFFTGSKLLLLIEFLEVPKLGGSEIVEYLK 237
           KGYVFQMEMIVRASRKGYHIEE P+    R+F  GS            KLGGSEIVEYLK
Sbjct: 188 KGYVFQMEMIVRASRKGYHIEEVPITFVDRVF--GSS-----------KLGGSEIVEYLK 234

Query: 238 GLAYLLVTT 246
           GLAYLLVTT
Sbjct: 235 GLAYLLVTT 243


>Glyma07g32560.1 
          Length = 243

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/249 (83%), Positives = 221/249 (88%), Gaps = 17/249 (6%)

Query: 2   EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61
           +KNKYSII+PTYNERLNI LIVYLIFKHL D DFEII+VDDGSPDGTQ+VVKQLQQVYGE
Sbjct: 8   QKNKYSIIVPTYNERLNIGLIVYLIFKHLGDADFEIIIVDDGSPDGTQDVVKQLQQVYGE 67

Query: 62  DRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 121
           DRILLR RP+KLGLGTAY+HG+KHASGNFVVIMDADLSHHPKYLP+FI+KQ ETGA IVT
Sbjct: 68  DRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPNFIRKQSETGADIVT 127

Query: 122 GTRYVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 181
           GTRYVKGGGVHGWNLMRKLTSRGANVLA TLLWPGVSDLTGSFRLY+KSVLEDIIS  VS
Sbjct: 128 GTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKSVLEDIISCCVS 187

Query: 182 KGYVFQMEMIVRASRKGYHIEE-PLA---RLFFTGSKLLLLIEFLEVPKLGGSEIVEYLK 237
           KGYVFQMEMIVRASRKGYHIEE P+    R+F  GS            KLGGSEIVEYLK
Sbjct: 188 KGYVFQMEMIVRASRKGYHIEEVPITFVDRVF--GSS-----------KLGGSEIVEYLK 234

Query: 238 GLAYLLVTT 246
           GLAYLLVTT
Sbjct: 235 GLAYLLVTT 243


>Glyma13g24040.2 
          Length = 230

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/249 (79%), Positives = 209/249 (83%), Gaps = 30/249 (12%)

Query: 2   EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61
           +KNKYSII+PTYNERLNI LIVYLIFKHL              PDGTQ+VVKQLQQVYGE
Sbjct: 8   QKNKYSIIVPTYNERLNIGLIVYLIFKHL-------------GPDGTQDVVKQLQQVYGE 54

Query: 62  DRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 121
           DRILLR RP+KLGLGTAY+HG+KHASGNFVVIMDADLSHHPKYLPSFI+KQ ETGA IVT
Sbjct: 55  DRILLRARPRKLGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPSFIRKQSETGADIVT 114

Query: 122 GTRYVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 181
           GTRYVKGGGVHGWNLMRKLTSRGANVLA TLLWPGVSDLTGSFRLY+KSVLEDIIS  VS
Sbjct: 115 GTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKSVLEDIISCCVS 174

Query: 182 KGYVFQMEMIVRASRKGYHIEE-PLA---RLFFTGSKLLLLIEFLEVPKLGGSEIVEYLK 237
           KGYVFQMEMIVRASRKGYHIEE P+    R+F  GS            KLGGSEIVEYLK
Sbjct: 175 KGYVFQMEMIVRASRKGYHIEEVPITFVDRVF--GSS-----------KLGGSEIVEYLK 221

Query: 238 GLAYLLVTT 246
           GLAYLLVTT
Sbjct: 222 GLAYLLVTT 230


>Glyma02g10150.1 
          Length = 333

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 33/216 (15%)

Query: 7   SIIIPTYNE--RLNIAL---IVYLIFKHLRDVDF--EIIVVDDGSPDGTQEVVKQLQQVY 59
           S+IIP +NE  RL  AL   + YL  + L+D  F  E++++DDGS D T+ V  +  + Y
Sbjct: 65  SLIIPAFNEEHRLPGALEETMNYLHQRTLKDSSFTYEVVIIDDGSADETKRVAFEFVRKY 124

Query: 60  GEDRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDA-------DLSHHPKYLPSFIKKQ 112
             D++ +    +  G G A   G+ H+ G  ++++DA       DL      + +  K++
Sbjct: 125 TVDKVRVILLGRNHGKGEAIRKGMMHSRGELLLMLDADGATKVTDLEKLENQIQAVAKRE 184

Query: 113 LETGASIVTGTRY--------VKGGGVH---------GWNLMRKLTSRGANVLAHTLLWP 155
              G S  +  R+        V G   H          W   R    +G +++      P
Sbjct: 185 YHHGDSSDSDPRFRISDIPAAVFGSRAHLEEKALATRKW--YRNFLMKGFHLVVLMAAGP 242

Query: 156 GVSDLTGSFRLYKKSVLEDIISSVVSKGYVFQMEMI 191
           G+ D    F+++ ++    + S+V  K + F +E++
Sbjct: 243 GICDTQCGFKMFTRAAARKLFSNVRLKRWCFDVELV 278


>Glyma18g52810.1 
          Length = 279

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 33/204 (16%)

Query: 7   SIIIPTYNE--RLNIAL---IVYLIFKHLRDVDF--EIIVVDDGSPDGTQEVVKQLQQVY 59
           S+IIP +NE  RL  AL   + YL  + L+D  F  E++++DDGS D T+ V  +  + Y
Sbjct: 65  SLIIPAFNEEHRLPGALEETMKYLHQRTLKDSSFTYEVVIIDDGSADETKRVAFEFVRKY 124

Query: 60  GEDRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDA-------DLSHHPKYLPSFIKKQ 112
             D++ +    +  G G A   G+ H+ G  ++++DA       DL      + +  K++
Sbjct: 125 TVDKVRVILLGRNHGKGEAIRKGMMHSRGELLLMLDADGATKVTDLEKLENQVQAVAKRE 184

Query: 113 LETGASIVTGTRY--------VKGGGVH---------GWNLMRKLTSRGANVLAHTLLWP 155
              G S  +  R+        V G   H          W   R    +G +++      P
Sbjct: 185 YHHGDSSDSDPRFRISDVPAAVFGSRAHLEEKALATGKW--YRNFLMKGFHLVVLLAAGP 242

Query: 156 GVSDLTGSFRLYKKSVLEDIISSV 179
           G+ D  G F+++ ++    + S+V
Sbjct: 243 GIRDTQGGFKMFTRAAARKLFSNV 266


>Glyma02g10150.2 
          Length = 249

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 28/194 (14%)

Query: 24  YLIFKHLRDVDF--EIIVVDDGSPDGTQEVVKQLQQVYGEDRILLRPRPKKLGLGTAYVH 81
           YL  + L+D  F  E++++DDGS D T+ V  +  + Y  D++ +    +  G G A   
Sbjct: 3   YLHQRTLKDSSFTYEVVIIDDGSADETKRVAFEFVRKYTVDKVRVILLGRNHGKGEAIRK 62

Query: 82  GLKHASGNFVVIMDA-------DLSHHPKYLPSFIKKQLETGASIVTGTRY--------V 126
           G+ H+ G  ++++DA       DL      + +  K++   G S  +  R+        V
Sbjct: 63  GMMHSRGELLLMLDADGATKVTDLEKLENQIQAVAKREYHHGDSSDSDPRFRISDIPAAV 122

Query: 127 KGGGVH---------GWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIIS 177
            G   H          W   R    +G +++      PG+ D    F+++ ++    + S
Sbjct: 123 FGSRAHLEEKALATRKW--YRNFLMKGFHLVVLMAAGPGICDTQCGFKMFTRAAARKLFS 180

Query: 178 SVVSKGYVFQMEMI 191
           +V  K + F +E++
Sbjct: 181 NVRLKRWCFDVELV 194