Jatropha Genome Database

JcCA0315091.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315091.30 + phase: 0 /partial
         (188 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g05250.1                                                       331   3e-91
Glyma05g34420.1                                                       330   6e-91

>Glyma08g05250.1 
          Length = 344

 Score =  331 bits (848), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 159/188 (84%), Positives = 168/188 (89%)

Query: 1   VQRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCNIFKQQYAFNLFSHNAPVLENG 60
           V RMVVSTYQ         MEEL+LQTREVLEGKPPTC IF +QYAFNLFSHNA VL NG
Sbjct: 157 VLRMVVSTYQAASGAGAAAMEELQLQTREVLEGKPPTCKIFNRQYAFNLFSHNASVLSNG 216

Query: 61  YNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTARAILKNA 120
           YNEEEMK+VKETRKIWN+ +VKVTATCIRVPVMRAHAESVNLQFE PLDEDTAR ILKNA
Sbjct: 217 YNEEEMKMVKETRKIWNNKDVKVTATCIRVPVMRAHAESVNLQFETPLDEDTARDILKNA 276

Query: 121 AGVVVIDDRASNHFPTPLEVSNKDDVAVGRIRRDVSQEGNHGLDIFVCGDQIRKGAALNA 180
            GVVVIDDR SNHFPTPLEVSNKDDVAVGRIR+D+SQ+GN GLDIFVCGDQIRKGAALNA
Sbjct: 277 PGVVVIDDRESNHFPTPLEVSNKDDVAVGRIRQDLSQDGNQGLDIFVCGDQIRKGAALNA 336

Query: 181 IQIAELLL 188
           IQIAE+LL
Sbjct: 337 IQIAEMLL 344


>Glyma05g34420.1 
          Length = 376

 Score =  330 bits (845), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 158/188 (84%), Positives = 168/188 (89%)

Query: 1   VQRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCNIFKQQYAFNLFSHNAPVLENG 60
           V RMVVSTYQ         MEELELQTREVLEGKPPTC IF +QYAFNLFSHNA VL  G
Sbjct: 189 VLRMVVSTYQAASGAGAAAMEELELQTREVLEGKPPTCKIFNRQYAFNLFSHNASVLSKG 248

Query: 61  YNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTARAILKNA 120
           +NEEEMK+VKETRKIWND +VKVTATCIRVP+MRAHAESVNLQFE+PLDEDTAR ILKNA
Sbjct: 249 FNEEEMKMVKETRKIWNDKDVKVTATCIRVPIMRAHAESVNLQFERPLDEDTARDILKNA 308

Query: 121 AGVVVIDDRASNHFPTPLEVSNKDDVAVGRIRRDVSQEGNHGLDIFVCGDQIRKGAALNA 180
            GVVVIDDR SNHFPTPLEVSNKDDVAVGRIR+D+SQ+GN GLDIFVCGDQIRKGAALNA
Sbjct: 309 PGVVVIDDRESNHFPTPLEVSNKDDVAVGRIRQDLSQDGNQGLDIFVCGDQIRKGAALNA 368

Query: 181 IQIAELLL 188
           IQIAE+LL
Sbjct: 369 IQIAEMLL 376