Jatropha Genome Database

JcCA0315091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315091.10 + phase: 2 /partial
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g09460.1                                                       169   4e-43
Glyma02g09460.2                                                       109   8e-25
Glyma08g01010.1                                                        84   4e-17
Glyma05g33430.3                                                        83   8e-17
Glyma05g33430.1                                                        82   1e-16
Glyma05g33430.2                                                        82   1e-16
Glyma06g17160.1                                                        82   1e-16
Glyma04g37910.1                                                        81   3e-16
Glyma06g17160.2                                                        51   3e-07

>Glyma02g09460.1 
          Length = 247

 Score =  169 bits (429), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 82/121 (67%), Positives = 95/121 (78%)

Query: 1   SFRGREIGNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXX 60
           +F+GREIG EKLIGI+DLQ I+Y+N DARGLITGFQFLQAYYPERLAKC++LHMP     
Sbjct: 123 AFKGREIGTEKLIGIIDLQNISYKNIDARGLITGFQFLQAYYPERLAKCYMLHMPWFFVS 182

Query: 61  XXXXXXXXLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQDVVLPQLE 120
                   LEKAT EKIVIVSNE+E   F++E+GEE+LPE YGG+AKL  IQDV LP LE
Sbjct: 183 VWKLVSRFLEKATLEKIVIVSNEDETREFVREVGEEVLPEMYGGRAKLEAIQDVELPPLE 242

Query: 121 G 121
            
Sbjct: 243 N 243


>Glyma02g09460.2 
          Length = 210

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 72/120 (60%), Gaps = 37/120 (30%)

Query: 1   SFRGREIGNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXX 60
           +F+GREIG EKLIGI+DLQ I+Y+N DARGLITGFQFLQ                     
Sbjct: 123 AFKGREIGTEKLIGIIDLQNISYKNIDARGLITGFQFLQ--------------------- 161

Query: 61  XXXXXXXXLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQDVVLPQLE 120
                           IVIVSNE+E   F++E+GEE+LPE YGG+AKL  IQDV LP LE
Sbjct: 162 ----------------IVIVSNEDETREFVREVGEEVLPEMYGGRAKLEAIQDVELPPLE 205


>Glyma08g01010.1 
          Length = 210

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK +GI +L+   Y N+D RG ++    LQ YYPERL K FI++ P            
Sbjct: 103 GQEKFVGIAELKGWGYSNSDVRGYLSALSILQDYYPERLGKLFIVNAPYIFMKVWKIIYP 162

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQD 113
            ++  T++KIV V   + +   ++E+ E  +PE +GG   LVPIQD
Sbjct: 163 FIDNKTKKKIVFVEKNKVKSTLLEEMDESQVPEIFGGSLSLVPIQD 208


>Glyma05g33430.3 
          Length = 204

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK +GI +L+   Y N+D RG ++    LQ YYPERL K FI++ P            
Sbjct: 98  GQEKFVGIAELKGWGYSNSDVRGYLSALSILQDYYPERLGKLFIVNAPYIFMKVWQIVYP 157

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQD 113
            ++  T++KIV V   + +   ++E+ E  +PE +GG   LVPIQD
Sbjct: 158 FIDNKTKKKIVFVEKNKVKSTLLEEMEESQVPEIFGGSLPLVPIQD 203


>Glyma05g33430.1 
          Length = 261

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK +GI +L+   Y N+D RG ++    LQ YYPERL K FI++ P            
Sbjct: 155 GQEKFVGIAELKGWGYSNSDVRGYLSALSILQDYYPERLGKLFIVNAPYIFMKVWQIVYP 214

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQD 113
            ++  T++KIV V   + +   ++E+ E  +PE +GG   LVPIQD
Sbjct: 215 FIDNKTKKKIVFVEKNKVKSTLLEEMEESQVPEIFGGSLPLVPIQD 260


>Glyma05g33430.2 
          Length = 256

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK +GI +L+   Y N+D RG ++    LQ YYPERL K FI++ P            
Sbjct: 150 GQEKFVGIAELKGWGYSNSDVRGYLSALSILQDYYPERLGKLFIVNAPYIFMKVWQIVYP 209

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQD 113
            ++  T++KIV V   + +   ++E+ E  +PE +GG   LVPIQD
Sbjct: 210 FIDNKTKKKIVFVEKNKVKSTLLEEMEESQVPEIFGGSLPLVPIQD 255


>Glyma06g17160.1 
          Length = 265

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 58/106 (54%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK + I D++   Y N+D RG +     LQ  YPERL K  I+H P            
Sbjct: 159 GQEKFLAIADIKGWAYANSDLRGYLNALSILQDCYPERLGKMVIVHAPYMFMKIWKMIYP 218

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQD 113
            ++  T++KIV V N++ +   ++EI E  LP+ YGGQ  LVPIQ+
Sbjct: 219 FIDDNTKKKIVFVENKKLKSTLLEEIEESQLPDIYGGQMPLVPIQN 264


>Glyma04g37910.1 
          Length = 264

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK + I D++   Y N+D RG +     LQ  YPERL K  I+H P            
Sbjct: 158 GQEKFLAIADIKGWAYVNSDLRGYLNSLSILQDCYPERLGKMLIVHAPYMFMKIWKMIYP 217

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQD 113
            +++ T++KIV V N++ +   ++EI E  +P+ YGGQ  LVPIQ+
Sbjct: 218 FIDENTKKKIVFVENKKLKSTLLEEIEESQIPDIYGGQMPLVPIQN 263


>Glyma06g17160.2 
          Length = 247

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 35/72 (48%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK + I D++   Y N+D RG +     LQ  YPERL K  I+H P            
Sbjct: 159 GQEKFLAIADIKGWAYANSDLRGYLNALSILQDCYPERLGKMVIVHAPYMFMKIWKMIYP 218

Query: 68  XLEKATQEKIVI 79
            ++  T++K+ +
Sbjct: 219 FIDDNTKKKVTL 230