Jatropha Genome Database

JcCA0314481.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314481.20 - phase: 1 /partial
         (505 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04920.1                                                       697   0.0  
Glyma13g17580.1                                                       520   e-147

>Glyma17g04920.1 
          Length = 1048

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/507 (65%), Positives = 397/507 (78%), Gaps = 4/507 (0%)

Query: 3    NKEANKISLKVGKIQENDVKKDCDTKRKTGVLIIGAGRVCRPAVEFLASIGSISSHECYK 62
            N++++KISLK+GK++EN ++K+ D ++K  VLI+GAGRVC+PA E L+S G  SS + YK
Sbjct: 542  NQDSSKISLKLGKVEENGIEKESDPRKKAAVLILGAGRVCQPAAEMLSSFGRPSSSQWYK 601

Query: 63   ACLDTDFEEQNDVQVFVASLYLKDAEEIIEGIPNATAVQLDVMDNESLCKYISQAEVVVS 122
              L+ DFE Q DV+V V SLYLKDAE+ +EGIPN T +QLDVMD  +LCKYISQ +VV+S
Sbjct: 602  TLLEDDFECQTDVEVIVGSLYLKDAEQTVEGIPNVTGIQLDVMDRANLCKYISQVDVVIS 661

Query: 123  LLPPSCHIIIANACIKLSKHLVTASYIDDSMSALDEKAKAADITILGEMGMDPGIDHMMA 182
            LLPPSCHII+ANACI+L KHLVTASY+D SMS L++KAK A ITILGEMG+DPGIDHMMA
Sbjct: 662  LLPPSCHIIVANACIELKKHLVTASYVDSSMSMLNDKAKDAGITILGEMGLDPGIDHMMA 721

Query: 183  MKMINQAHVRKGRLKSFTSYCGXXXXXXXXXXXXXYKFSWSPAGVIRAGRNPATYRLNGE 242
            MKMINQAHVRKG++KSFTSYCG             YKFSW+PAG IRAGRNPATY+  GE
Sbjct: 722  MKMINQAHVRKGKIKSFTSYCGGLPSPEAANNPLAYKFSWNPAGAIRAGRNPATYKWGGE 781

Query: 243  IVHIDGDSLYDSAFKLRIPHLPAFALECLPNRDSLVYEKVYGIEEASTIFRGTLRYEGFG 302
             VHIDGD LYDSA +LR+P LPAFALECLPNR+SL+Y  +YGI EASTIFRGTLRYEGF 
Sbjct: 782  TVHIDGDDLYDSATRLRLPDLPAFALECLPNRNSLLYGDLYGITEASTIFRGTLRYEGFS 841

Query: 303  EIMGILARIGFFRTEPHPVLRCERRPTFKTFLCELLKIPGEN----LSGEKDITENIVTL 358
            EIMG L+RI  F  E H +L   +RPTF+ FL ELLK+ G+N    L GE DI E I+  
Sbjct: 842  EIMGTLSRISLFNNEAHSLLMNGQRPTFRKFLFELLKVVGDNPDELLIGENDIMEQILIQ 901

Query: 359  GHCXXXXXXXXXXXXIIFLGFDEQTEIPASCRSAFDVTCYRMEERLVYSSTEQDMVLLHH 418
            GHC            IIFLG  +QTEIPASC+SAFDV C+RMEERL Y+STE+DMVLLHH
Sbjct: 902  GHCKDQRTAMETAKTIIFLGLLDQTEIPASCKSAFDVACFRMEERLSYTSTEKDMVLLHH 961

Query: 419  EIVVEFPDGQRPERHSATLLEFGTSKNGKTVTAMALTVGIPAAIGAXXXXENKIKSRGVL 478
            E+ +E+PD Q  E+H ATLLEFG + + KT TAMALTVGIPAA+GA     NKI++RGVL
Sbjct: 962  EVEIEYPDSQITEKHRATLLEFGKTLDEKTTTAMALTVGIPAAVGALLLLTNKIQTRGVL 1021

Query: 479  RPTEPEVYMPALEILQAHGIKLIEKVE 505
            RP EPEVY PAL+I++A+GIKLIEK E
Sbjct: 1022 RPIEPEVYNPALDIIEAYGIKLIEKTE 1048


>Glyma13g17580.1 
          Length = 966

 Score =  520 bits (1338), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/421 (61%), Positives = 305/421 (72%), Gaps = 40/421 (9%)

Query: 89  EIIEGIPNATAVQLDVMDNESLCKYISQAEVVVSLLPPSCHIIIANACIKLSKHLVTASY 148
           E +EGIPN T VQLDVMD+ +LCKYI+Q  VV+SLLPPSCHII+ANACI+L KHLVTASY
Sbjct: 582 ETVEGIPNVTGVQLDVMDHANLCKYIAQVNVVISLLPPSCHIIVANACIELKKHLVTASY 641

Query: 149 IDDSMSALDEKAKAADITILGEMGMDPGIDHMMAMKMINQAHVRKGRLKSFTSYCGXXXX 208
           +D SMS L++KAK A ITILGEMG+DPGIDHMMAMKMINQAHVRKG++KSFTSYCG    
Sbjct: 642 VDSSMSMLNDKAKDAGITILGEMGLDPGIDHMMAMKMINQAHVRKGKIKSFTSYCGGLP- 700

Query: 209 XXXXXXXXXYKFSWSPAGVIRAGRNPATYRLNGEIVHIDGDSLYDSAFKLRIPHLPAFAL 268
                         SP     A  NP  Y+                 F+LR+P LPAFAL
Sbjct: 701 --------------SP----EAANNPLAYK-----------------FRLRLPDLPAFAL 725

Query: 269 ECLPNRDSLVYEKVYGIEEASTIFRGTLRYEGFGEIMGILARIGFFRTEPHPVLRCERRP 328
           ECLPNR+SL+   +YGI EASTIFRGTLRYEGF EIMG L+RIG F  E H +L  E+R 
Sbjct: 726 ECLPNRNSLLLRDLYGITEASTIFRGTLRYEGFSEIMGTLSRIGLFNNEAHSLLMNEQRQ 785

Query: 329 TFKTFLCELLKIPGEN----LSGEKDITENIVTLGHCXXXXXXXXXXXXIIFLGFDEQTE 384
           TF+ FL ELLK+  +N    L GE DI E+I+T GHC            IIFLG   +TE
Sbjct: 786 TFRKFLFELLKVVSDNPDGPLIGENDIMEHILTQGHCKDQRTAMKTAKTIIFLGLLGETE 845

Query: 385 IPASCRSAFDVTCYRMEERLVYSSTEQDMVLLHHEIVVEFPDGQRPERHSATLLEFGTSK 444
           IPASC+SAFDV C+RMEERL Y+STE+DMVLLHHE+ +E+PD Q  E+H ATLLEFG + 
Sbjct: 846 IPASCKSAFDVVCFRMEERLSYTSTEKDMVLLHHELEIEYPDSQITEKHRATLLEFGKTL 905

Query: 445 NGKTVTAMALTVGIPAAIGAXXXXENKIKSRGVLRPTEPEVYMPALEILQAHGIKLIEKV 504
           NGKT TAMALTVGIPAA+GA     NKI++RGVLRP EPEVY PAL+I++A+GIKLIE  
Sbjct: 906 NGKTTTAMALTVGIPAAVGALLLLTNKIQTRGVLRPIEPEVYTPALDIIEAYGIKLIETT 965

Query: 505 E 505
           E
Sbjct: 966 E 966