Jatropha Genome Database

JcCA0314481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314481.10 + phase: 0 
         (355 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17590.1                                                       359   2e-99
Glyma09g09070.1                                                       354   9e-98
Glyma17g37490.1                                                       232   4e-61
Glyma09g09070.2                                                       166   3e-41
Glyma09g09070.3                                                       142   7e-34
Glyma03g10910.1                                                        72   1e-12
Glyma03g08130.1                                                        62   1e-09

>Glyma13g17590.1 
          Length = 267

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 172/224 (76%), Positives = 192/224 (85%), Gaps = 1/224 (0%)

Query: 133 NGHETCQGGKPLGFPDYPLTGKIVVAVDVDEVLGNFVSALNRFIADRYSSNHSVAEYHVY 192
           NG       KP  F D+ L+ K+VVAVDVDEVLGNFVSALN+FIADRYSSN+SV+EYHVY
Sbjct: 43  NGSINGSPAKPPCFSDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVY 102

Query: 193 EFFKIWKCSHDEANIRVHEFFKTSYFKSGIYPIPGAQKVLHKLSRLCNLSVVTSRQNVIK 252
           EF KIW CS DEA+IRVHEFFKT YFKSGI+P+PGAQ  L KLSR C+LSVVTSRQN IK
Sbjct: 103 EFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQMALQKLSRFCSLSVVTSRQNAIK 162

Query: 253 DHTIEWIEKHYPGVFHEIHFGNHFALDGESRPKSEICRTLGATVLIDDNPRYAIECAEAG 312
           D TIEWIEK+YPG+F EIHFGNHFALDG SRPKSEICR+L A VLIDDNPRYAIECA+ G
Sbjct: 163 DRTIEWIEKNYPGLFREIHFGNHFALDGVSRPKSEICRSLKAKVLIDDNPRYAIECADVG 222

Query: 313 IKVLLFDYENSYPWCKTDLV-RHPLVTKVHNWEQVEQQLISWIS 355
           I+VLLFDYENSYPWCK + V +HPLVTKV NWE+VEQQL+S I+
Sbjct: 223 IRVLLFDYENSYPWCKNESVDQHPLVTKVKNWEEVEQQLVSLIA 266


>Glyma09g09070.1 
          Length = 306

 Score =  354 bits (908), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 169/215 (78%), Positives = 185/215 (86%), Gaps = 1/215 (0%)

Query: 142 KPLGFPDYPLTGKIVVAVDVDEVLGNFVSALNRFIADRYSSNHSVAEYHVYEFFKIWKCS 201
           KP  F D  L  K+VVAVDVDEVLGNFVSALN+FIADRYSSN SV+EYHVYEFFKIW CS
Sbjct: 91  KPFCFSDQQLPQKLVVAVDVDEVLGNFVSALNKFIADRYSSNCSVSEYHVYEFFKIWNCS 150

Query: 202 HDEANIRVHEFFKTSYFKSGIYPIPGAQKVLHKLSRLCNLSVVTSRQNVIKDHTIEWIEK 261
            DEAN RVHEFF+T YFKSGI PIPGAQ  L KLS  C+LSVVTSRQNVIKDHT+EWIEK
Sbjct: 151 RDEANTRVHEFFETPYFKSGIQPIPGAQTSLQKLSTFCSLSVVTSRQNVIKDHTLEWIEK 210

Query: 262 HYPGVFHEIHFGNHFALDGESRPKSEICRTLGATVLIDDNPRYAIECAEAGIKVLLFDYE 321
           H+ G+F EIHFGNHFALDG SRPKSEICR++ ATVLIDDNPRYAIECAEAGI+VLLFDYE
Sbjct: 211 HFSGLFQEIHFGNHFALDGMSRPKSEICRSINATVLIDDNPRYAIECAEAGIRVLLFDYE 270

Query: 322 NSYPWCKTDLV-RHPLVTKVHNWEQVEQQLISWIS 355
           NSYPW KT+    HPLV KV NWE+VEQQL+S ++
Sbjct: 271 NSYPWSKTNSADEHPLVIKVKNWEEVEQQLMSLVA 305


>Glyma17g37490.1 
          Length = 276

 Score =  232 bits (592), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 120/196 (61%), Positives = 135/196 (68%), Gaps = 45/196 (22%)

Query: 164 VLGNFVSALNRFIADRYSSNHSVAEYHVYEFFKIWKCSHDEANIRVHEFFKTSYFKSGIY 223
           +LGNFVSAL++FIADRYSSN+SV+ YHVYEF KIW CS DE                   
Sbjct: 103 LLGNFVSALSKFIADRYSSNYSVSGYHVYEFCKIWNCSRDE------------------- 143

Query: 224 PIPGAQKVLHKLSRLCNLSVVT----------------------SRQNVIKDHTIEWIEK 261
              GAQ  L KLSR C+LSVVT                      SRQN IKDH IEW+EK
Sbjct: 144 ---GAQMTLQKLSRFCSLSVVTYAFGIDLSSYCKRILSALTNWRSRQNAIKDHIIEWLEK 200

Query: 262 HYPGVFHEIHFGNHFALDGESRPKSEICRTLGATVLIDDNPRYAIECAEAGIKVLLFDYE 321
           +YPG+FH+IHFGNHFALDG SRPKSEICR+L A VLIDDNPRYAIECA+ GI+VLLFDYE
Sbjct: 201 NYPGLFHDIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECADVGIRVLLFDYE 260

Query: 322 NSYPWCKTDLV-RHPL 336
           NSYPWCK + V +HPL
Sbjct: 261 NSYPWCKNESVDQHPL 276


>Glyma09g09070.2 
          Length = 207

 Score =  166 bits (421), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 84/116 (72%), Positives = 90/116 (77%), Gaps = 4/116 (3%)

Query: 130 RYINGHETCQGGKPLGFPDYPLTGKIVVAVDVDEVLGNFVSALNRFIADRYSSNHSVAEY 189
           R + G  T    KP  F D  L  K+VVAVDVDEVLGNFVSALN+FIADRYSSN SV+EY
Sbjct: 83  RSLGGSPT----KPFCFSDQQLPQKLVVAVDVDEVLGNFVSALNKFIADRYSSNCSVSEY 138

Query: 190 HVYEFFKIWKCSHDEANIRVHEFFKTSYFKSGIYPIPGAQKVLHKLSRLCNLSVVT 245
           HVYEFFKIW CS DEAN RVHEFF+T YFKSGI PIPGAQ  L KLS  C+LSVVT
Sbjct: 139 HVYEFFKIWNCSRDEANTRVHEFFETPYFKSGIQPIPGAQTSLQKLSTFCSLSVVT 194


>Glyma09g09070.3 
          Length = 180

 Score =  142 bits (357), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 78/102 (76%), Gaps = 4/102 (3%)

Query: 130 RYINGHETCQGGKPLGFPDYPLTGKIVVAVDVDEVLGNFVSALNRFIADRYSSNHSVAEY 189
           R + G  T    KP  F D  L  K+VVAVDVDEVLGNFVSALN+FIADRYSSN SV+EY
Sbjct: 83  RSLGGSPT----KPFCFSDQQLPQKLVVAVDVDEVLGNFVSALNKFIADRYSSNCSVSEY 138

Query: 190 HVYEFFKIWKCSHDEANIRVHEFFKTSYFKSGIYPIPGAQKV 231
           HVYEFFKIW CS DEAN RVHEFF+T YFKSGI PIP   K+
Sbjct: 139 HVYEFFKIWNCSRDEANTRVHEFFETPYFKSGIQPIPDLGKM 180


>Glyma03g10910.1 
          Length = 243

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 2/60 (3%)

Query: 159 VDVDEVLGNFVSALNRFIADRYSSNHSVAEYHVYEFFKIWKCSHDEANIRVHEFFKTSYF 218
           +D   VLGNFVSALN+F+AD+YSSN+SV EYHVYEF KI  CS DE N     F  TS+F
Sbjct: 135 LDRLRVLGNFVSALNKFVADQYSSNYSVFEYHVYEFCKIRNCSCDEGNCICQIF--TSHF 192


>Glyma03g08130.1 
          Length = 85

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 33/34 (97%)

Query: 164 VLGNFVSALNRFIADRYSSNHSVAEYHVYEFFKI 197
           VLGNFVSALN+FIAD+YSSN+SV+EYHVYEF KI
Sbjct: 1   VLGNFVSALNKFIADQYSSNYSVSEYHVYEFCKI 34