Jatropha Genome Database

JcCA0314181.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314181.20 - phase: 0 /partial
         (392 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27810.1                                                       631   0.0  

>Glyma13g27810.1 
          Length = 601

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/391 (78%), Positives = 338/391 (86%)

Query: 2   YGEYVNGSISDEGRKNVVRNSCPGAGACGGMYTANTMASAIEAMGMSLPYSSSIPAESPL 61
           YGEYV+GSI+D+ R+NV+RNSCPGAGACGGMYTANTMASAIEAMGMSLPYSSS PAE PL
Sbjct: 211 YGEYVSGSINDDQRQNVIRNSCPGAGACGGMYTANTMASAIEAMGMSLPYSSSTPAEDPL 270

Query: 62  KLDECRLAGKYLLELLKMDLKPRDIITRQSLRNAMVIVMALGGSTNAVLHLIAIARSVGL 121
           KLDECRLAGKYLLELLKMDLKPRDIITR+SLRNAMVIVMALGGSTNAVLHLIAIA+SVG+
Sbjct: 271 KLDECRLAGKYLLELLKMDLKPRDIITRKSLRNAMVIVMALGGSTNAVLHLIAIAKSVGI 330

Query: 122 ELKLDDFQKVSDEVPFLADLKPSGKYVMEDVHKIGGTPAVLRYLLERGFLDGDCLTVTGK 181
           +L LDDFQKVSDEVPF+ADLKPSGKYVMEDVHKIGGTPAV+RYLLE+GFLDGDC+TVTGK
Sbjct: 331 DLTLDDFQKVSDEVPFIADLKPSGKYVMEDVHKIGGTPAVIRYLLEQGFLDGDCMTVTGK 390

Query: 182 TLAENVQNCPPLSEGQDIIRSLENPIKKTGHIQILRGNLAPEGSVAKITGKEGLYFSGPA 241
           TLAEN +  PPLS GQ+IIR +ENPIKKT HIQIL GNLAP+GSVAKITGKEGLYFSGPA
Sbjct: 391 TLAENAELVPPLSNGQEIIRPVENPIKKTAHIQILYGNLAPQGSVAKITGKEGLYFSGPA 450

Query: 242 LVFEGEEAMIRAITENPKNFKGKVVVIRXXXXXXXXXXXXXLTPTSAIMGAGLGKDCALL 301
           LVFEGEEAMI AI+E+P +FKGKVVVIR             LTPTSAIMGAGLGK+ ALL
Sbjct: 451 LVFEGEEAMIAAISEDPSSFKGKVVVIRGEGPKGGPGMPEMLTPTSAIMGAGLGKEVALL 510

Query: 302 TDGRXXXXXXXXXXXXXCPEAQEGGPIGLLRNGDTIKIDVQERRIDVELTDKEMEERRKN 361
           TDGR             CPEAQEGGPIGL++NGD I +D++ RRIDV ++D+EME RRK 
Sbjct: 511 TDGRFSGGSHGFVVGHICPEAQEGGPIGLIQNGDVINVDIKNRRIDVLVSDEEMEARRKK 570

Query: 362 WSPPPYKATCGVLYKYIKNVCSASRGCVTDE 392
           W+ PPYKA  G LYKYIKNV  AS GCVTDE
Sbjct: 571 WTAPPYKANRGALYKYIKNVTPASSGCVTDE 601