Jatropha Genome Database

JcCA0314171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314171.20 + phase: 0 
         (306 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03720.1                                                       338   5e-93
Glyma09g27880.1                                                       189   3e-48
Glyma11g30660.1                                                       150   1e-36
Glyma06g03810.1                                                       143   2e-34
Glyma20g27060.1                                                       129   3e-30
Glyma10g40280.1                                                       121   1e-27
Glyma05g21750.1                                                        85   1e-16
Glyma08g42620.2                                                        52   1e-06
Glyma08g42620.1                                                        50   2e-06

>Glyma04g03720.1 
          Length = 293

 Score =  338 bits (866), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 158/244 (64%), Positives = 198/244 (81%), Gaps = 2/244 (0%)

Query: 48  QHGKKCELFDLCKTLVPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLGTG 107
           Q  ++CELFDL + L+PY  AW+WQKDIV+EKK+ IE   +  DTLI+LQH  VYTLGT 
Sbjct: 32  QCSRRCELFDLHQELIPYDVAWSWQKDIVREKKSQIENEGDCSDTLIILQHPSVYTLGTA 91

Query: 108 SSVGYLNFDVKDAPFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVV 167
           S+   LNFD+++ PF +YRTERGGEVT+HGPGQL+MYPIINLR H+MDLHWYLR LEEVV
Sbjct: 92  STHHNLNFDIENPPFPIYRTERGGEVTFHGPGQLIMYPIINLRRHKMDLHWYLRTLEEVV 151

Query: 168 IRVLASTFSIEASRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVP 227
           IR L+STFSI+ASRVEGLTGVWVG++K+AA+GI+V+ WITYHGLALNVTTDL+PF W++P
Sbjct: 152 IRALSSTFSIQASRVEGLTGVWVGNQKLAALGIRVAHWITYHGLALNVTTDLSPFKWVIP 211

Query: 228 CGIRNRKVGSIKGLLLQQIDSCLYENGDD-PEFVDSHLIDTTYKSLVREFSDIFQLNIYH 286
           CGIR+R+VGSIKG LL++  SC+        +  D+ LI  TY+SL+ EFS  FQL  ++
Sbjct: 212 CGIRDRQVGSIKG-LLKEAQSCIAHGTSVLHDLDDTSLIHITYRSLIEEFSRAFQLEYHY 270

Query: 287 KTVS 290
           KT+S
Sbjct: 271 KTIS 274


>Glyma09g27880.1 
          Length = 157

 Score =  189 bits (480), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/175 (57%), Positives = 120/175 (68%), Gaps = 20/175 (11%)

Query: 118 KDAPFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSI 177
           ++APF +Y TERGGEVTYHGPGQ             MDLHWYLR LEEVVI VLAS+FSI
Sbjct: 1   QNAPFNIYHTERGGEVTYHGPGQ-------------MDLHWYLRTLEEVVIHVLASSFSI 47

Query: 178 EASRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGI--RNRKV 235
           +ASR+EGLTG    +EK+  +GI+VS WITYHGLALNVTT+L  F WIVPCGI     +V
Sbjct: 48  QASRLEGLTG----NEKLVVVGIRVSHWITYHGLALNVTTNLCLFKWIVPCGIHGHGHQV 103

Query: 236 GSIKGLLLQQIDSCLYENGDDPEFVDSHLIDTTYKSLVREFSDIFQLNIYHKTVS 290
           GSIKG L+++   C+    D     D+ LI  TYKSL+ EFS  FQL   +K +S
Sbjct: 104 GSIKG-LVREGKLCINHGTDLHHLDDASLIHITYKSLIEEFSQAFQLEYCYKNIS 157


>Glyma11g30660.1 
          Length = 147

 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/131 (59%), Positives = 96/131 (73%), Gaps = 7/131 (5%)

Query: 154 MDLHWYLRALEEVVIRVLASTFSIEASRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLAL 213
           MDLHWYLR LE+VVI VL+S+FSI+ASR+EGLTGVW    K+  IGI+VS WITYHGLAL
Sbjct: 21  MDLHWYLRTLEDVVIYVLSSSFSIQASRLEGLTGVW----KLVVIGIRVSHWITYHGLAL 76

Query: 214 NVTTDLTPFNWIVPCGI--RNRKVGSIKGLLLQQIDSCLYENGDDPEFVDSHLIDTTYKS 271
           NVTT+L  F WIVPC I   + +VGSIKG L++++  C+    D     D+ LI  T+KS
Sbjct: 77  NVTTNLCLFKWIVPCEIHGHSHQVGSIKG-LVREVKLCINHGIDLHHLNDASLIHITHKS 135

Query: 272 LVREFSDIFQL 282
           L+ EFS  FQL
Sbjct: 136 LIEEFSQAFQL 146


>Glyma06g03810.1 
          Length = 106

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 78/96 (81%)

Query: 76  VKEKKAMIERNEEFPDTLIVLQHRPVYTLGTGSSVGYLNFDVKDAPFEVYRTERGGEVTY 135
           ++EKK  IE   +  DTLI+LQH  VYTLGT S+   LNFD+++ PF +YRTERGGEVT+
Sbjct: 2   LREKKLQIENGGDCSDTLIILQHPSVYTLGTASTHHNLNFDIENPPFPIYRTERGGEVTF 61

Query: 136 HGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVL 171
           HGPGQLVMYPIINLR H+MDLHWYLR LEEVVIR L
Sbjct: 62  HGPGQLVMYPIINLRRHKMDLHWYLRTLEEVVIRAL 97


>Glyma20g27060.1 
          Length = 234

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 131/229 (57%), Gaps = 24/229 (10%)

Query: 62  LVPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLGTGSSVGYL---NFDVK 118
           +V Y DA   Q     EK A+  +     DTL+ LQH P YT+G   +V  L     +++
Sbjct: 14  VVNYLDALKLQ-----EKLALDRKLHRRCDTLLSLQHPPTYTVGKRQTVHNLLIPQSELE 68

Query: 119 DAPFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSIE 178
               E++ T+RGG++T+HGP Q ++YPII+LR+  +    ++  +E  +I+ LA+ + ++
Sbjct: 69  KIGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARSFVEKIELTMIK-LAAMYGVK 127

Query: 179 ASRVE-GLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGIRNRKVGS 237
           A   + G TGVWVG+ K+ AIG+++S  IT HG+A N+  DL+ F  IVPCGI +++V S
Sbjct: 128 ACPGQSGETGVWVGERKIGAIGVRISSGITSHGMAFNIDPDLSYFKNIVPCGIVDKEVTS 187

Query: 238 IKGLLLQQIDSCLYENGDDPEFVDSHLIDT-----TYKSLVR-EFSDIF 280
           ++    ++ DS L E     E +   LI        Y  L+R E + IF
Sbjct: 188 LR----RETDSVLPEE----EIIQEQLISCFARIFGYSDLIRKEDASIF 228


>Glyma10g40280.1 
          Length = 233

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 127/221 (57%), Gaps = 25/221 (11%)

Query: 76  VKEKKAMIERNEEFPDTLIV-LQHRPVYTLGTGSSV--------GYLNFDVKDAPFEVYR 126
           ++EK A+  +     DT+++ LQH P YT+G   +V         +L  ++     E++ 
Sbjct: 21  LQEKLALDRKLHRRCDTILLSLQHPPTYTVGKRQTVHNLLIPQSEFLASELDKIGAELHY 80

Query: 127 TERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSIEASRVE-GL 185
             RGG++T+HGP Q +++PII+LR   +D   ++  +E  +I  LA+T+ ++A   + G 
Sbjct: 81  MRRGGDITFHGPYQAILHPIISLRTMGLDARCFVEKIELTMIE-LAATYCVKACPGQSGE 139

Query: 186 TGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGIRNRKVGSIKGLLLQQ 245
           TGVW+G+ K+ AIG+++S  IT HG+A N+  DL+ F  IVPCGI + +V S++    ++
Sbjct: 140 TGVWIGERKIGAIGVRISSGITSHGMAFNIDPDLSYFKHIVPCGIADIEVTSLR----RE 195

Query: 246 IDSCLYENGDDPEFVDSHLIDT-----TYKSLV-REFSDIF 280
            DS L E     E +   LI       +Y+ L+ +E + IF
Sbjct: 196 TDSVLPEE----EIIQEQLISCFARIFSYRDLIWKEDASIF 232


>Glyma05g21750.1 
          Length = 103

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 206 ITYHGLALNVTTDLTPFNWIVPCGI--RNRKVGSIKGLLLQQIDSCLYENGDDPEFVDSH 263
           ITYHGLALN TT+L  F WIVPCGI     +VGSIKG L ++   C+    +     D+ 
Sbjct: 1   ITYHGLALNATTNLCLFKWIVPCGIHGHGHQVGSIKG-LAREGKLCINHGTNLHHLDDAS 59

Query: 264 LIDTTYKSLVREFSDIFQLNIYHKTVSSLEF 294
           LI  TYKSL+ EFS  FQL   HK +S+  F
Sbjct: 60  LIHITYKSLIEEFSQAFQLEYCHKNISATMF 90


>Glyma08g42620.2 
          Length = 63

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 71  WQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLG 105
           WQK+IV+EKKA IE+  +  DTLI+LQH  VYTLG
Sbjct: 25  WQKEIVREKKAHIEKEGDCTDTLIILQHPSVYTLG 59


>Glyma08g42620.1 
          Length = 74

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/45 (53%), Positives = 30/45 (66%)

Query: 71  WQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLGTGSSVGYLNF 115
           WQK+IV+EKKA IE+  +  DTLI+LQH  VYTL     +G   F
Sbjct: 25  WQKEIVREKKAHIEKEGDCTDTLIILQHPSVYTLVEAEELGLDKF 69