Jatropha Genome Database

JcCA0313811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313811.10 - phase: 0 /partial
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g13570.1                                                       229   1e-60
Glyma09g02690.1                                                       224   3e-59

>Glyma15g13570.1 
          Length = 444

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 137/177 (77%), Gaps = 14/177 (7%)

Query: 1   VPEESRLIFRASASSLECCCFIDNDEFLSGSDDGNIEVWGMQKKKPVYIVRNAHALFTDN 60
           V EESRL+FRA ASSLECCCF+ NDE LSGSDDG+IE+W + +KKP+YI+RNAHAL  D+
Sbjct: 263 VHEESRLVFRAPASSLECCCFVSNDELLSGSDDGSIELWTVMRKKPIYILRNAHALLVDS 322

Query: 61  TNLEQKE-----NGSIFNG-----DKAC----SWVSSVTVCRGSDLAASGAGNGSVHLWA 106
              +QK+     NG++ NG     +  C    SWVS+V+VCR SDLAASGAGNGSV LW 
Sbjct: 323 MKSDQKDSEKLPNGNLENGYNHPENHHCLSVFSWVSAVSVCRNSDLAASGAGNGSVRLWE 382

Query: 107 IESAPACIRPLYDVPLVGFVNSLAFSKSGEFLVAGVGQEPRLGRWGQISAARNGVAI 163
           IES    I+ LY+VPL GFVNSLAF+KSGEFLVAGVGQEPRLGRWG+   ARNGV+I
Sbjct: 383 IESDTKDIKSLYNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGRWGRNPEARNGVSI 439


>Glyma09g02690.1 
          Length = 496

 Score =  224 bits (572), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/181 (64%), Positives = 137/181 (75%), Gaps = 14/181 (7%)

Query: 1   VPEESRLIFRASASSLECCCFIDNDEFLSGSDDGNIEVWGMQKKKPVYIVRNAHALFTDN 60
           V EESRL+FRA ASSLECCCF+ NDE  SGSDDG+IE+W + +KKP+YI+RNAHAL  D+
Sbjct: 315 VHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRKKPIYILRNAHALPVDS 374

Query: 61  TNLEQKE-----NGSIFNG-----DKAC----SWVSSVTVCRGSDLAASGAGNGSVHLWA 106
              +QK+     NG++ NG     D  C    SWVS+V+VCR SDLAASGAGNGSV LW 
Sbjct: 375 MKSDQKDSEKLPNGNLENGYNHPKDHHCLSVFSWVSAVSVCRNSDLAASGAGNGSVRLWE 434

Query: 107 IESAPACIRPLYDVPLVGFVNSLAFSKSGEFLVAGVGQEPRLGRWGQISAARNGVAIHRL 166
           IES    I+ L +VPL GFVNSLAF+KSGEFLVAGVGQEPRLGRWG+   ARNGV+I  L
Sbjct: 435 IESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGRWGRNPEARNGVSILPL 494

Query: 167 K 167
           K
Sbjct: 495 K 495