Jatropha Genome Database

JcCA0313541.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313541.20 - phase: 0 /pseudo
         (469 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g13290.1                                                       342   5e-94
Glyma05g30130.1                                                       319   5e-87

>Glyma08g13290.1 
          Length = 474

 Score =  342 bits (877), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 174/269 (64%), Positives = 206/269 (76%), Gaps = 12/269 (4%)

Query: 57  ALSKGQWHTISVFIGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVRGTDKVL 116
           A SK + HTISVF+GDESG+INRIAGVFARRGYNIESLAVGLN+D+ALFTIVV GTDKVL
Sbjct: 65  ARSKVRRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNEDRALFTIVVSGTDKVL 124

Query: 117 QQVIEQLNKLVNVIKVEDISREPQVERELMLLKLNVDPSTHPEIMXLVDIFRTKVVDISE 176
           +QV+EQL KLVNV+KVED+SREPQVERELML+K++ DP  H E+  LVDIFR K+VDIS+
Sbjct: 125 RQVMEQLQKLVNVLKVEDLSREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISQ 184

Query: 177 HTLTIEVTGDPGKMAAVLRNLSNFRIEELT----IALRRERMRETAPFWRFSAASYPDLE 232
           H++TIEVTGDPGKMAAV RN S F I+E+     IALRRE+M  +APFWR+SAASYPDLE
Sbjct: 185 HSVTIEVTGDPGKMAAVQRNFSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLE 244

Query: 233 RTQPGDAFXXXXXXXXXXXXXXXXXXXXXXXXXXDVYPVEPYDDYSMNQVLDAHWGVLYD 292
              P +A                           DVYP+EP D +++NQVLDAHWGVL +
Sbjct: 245 GRTPVNAM--------VGAKNMKPVAKHDTPVGGDVYPIEPPDGFTVNQVLDAHWGVLNE 296

Query: 293 EDSSGSQSHTLSMLVNDSPGVLTWSLVLF 321
           ED+SG +SHTLSMLVND+PGVL     +F
Sbjct: 297 EDTSGIRSHTLSMLVNDAPGVLNIVTGVF 325



 Score =  129 bits (324), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 109/169 (64%), Gaps = 3/169 (1%)

Query: 64  HTISVFIGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVRGTDKVLQQVIE 121
           HT+S+ + D  G++N + GVFARRGYNI+SLAVG  + + L   T VV GTD+ + ++++
Sbjct: 305 HTLSMLVNDAPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRLTTVVPGTDESISKLVQ 364

Query: 122 QLNKLVNVIKVEDISREPQVERELMLLKLNVDPSTHPEIMXLVDIFRTKVVDISEHTLTI 181
           QL KLV + +V DI+  P  ERELML+K+ V+ +   +++ +  IFR K VD+S HT+T+
Sbjct: 365 QLYKLVELHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSGHTITL 424

Query: 182 EVTGDPGKMAAVLRNLSNFRIEELTIALRRERMRETAPFWRF-SAASYP 229
           E+TGD  KM A+ R L  + I E+    R   +RE+    ++    SYP
Sbjct: 425 ELTGDLDKMVALQRLLEPYGICEVARTGRIALVRESGVDSKYLRGYSYP 473


>Glyma05g30130.1 
          Length = 391

 Score =  319 bits (817), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 161/244 (65%), Positives = 188/244 (77%), Gaps = 12/244 (4%)

Query: 76  IINRIAGVFARRGYNIESLAVGLNKDKALFTIVVRGTDKVLQQVIEQLNKLVNVIKVEDI 135
           +INRIAGVFARRGYNIESLAVGLN+D+ALFTIVV GTDKVL+QV+EQL KLVNV+KVED+
Sbjct: 1   MINRIAGVFARRGYNIESLAVGLNEDRALFTIVVSGTDKVLRQVMEQLQKLVNVLKVEDL 60

Query: 136 SREPQVERELMLLKLNVDPSTHPEIMXLVDIFRTKVVDISEHTLTIEVTGDPGKMAAVLR 195
           SREPQVERELML+K++ DP  H E+  LVDIFR K+VDISEH++TIEVTGDPGKMAAV R
Sbjct: 61  SREPQVERELMLIKVHADPKHHAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKMAAVQR 120

Query: 196 NLSNFRIEELT----IALRRERMRETAPFWRFSAASYPDLERTQPGDAFXXXXXXXXXXX 251
           N S F I+E+     IALRRE+M  +APFWR+SAASYPDLE   P +A            
Sbjct: 121 NFSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGRTPVNAL--------VGA 172

Query: 252 XXXXXXXXXXXXXXXDVYPVEPYDDYSMNQVLDAHWGVLYDEDSSGSQSHTLSMLVNDSP 311
                          DVYP+EP D +++NQVLDAHWGVL DED+SG +SHTLSMLVND+P
Sbjct: 173 KNMKPVAKLDTPVGGDVYPIEPSDGFTVNQVLDAHWGVLNDEDTSGIRSHTLSMLVNDAP 232

Query: 312 GVLT 315
           GVL 
Sbjct: 233 GVLN 236



 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 110/169 (65%), Gaps = 3/169 (1%)

Query: 64  HTISVFIGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVRGTDKVLQQVIE 121
           HT+S+ + D  G++N + GVFARRGYNI+SLAVG  + + L   T VV GTD+ + ++++
Sbjct: 222 HTLSMLVNDAPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRLTTVVPGTDESISKLVQ 281

Query: 122 QLNKLVNVIKVEDISREPQVERELMLLKLNVDPSTHPEIMXLVDIFRTKVVDISEHTLTI 181
           QL KLV + +V DI+  P  ERELML+K+ V+ +   +++ +  IFR K VD+S+HT+T+
Sbjct: 282 QLYKLVELHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITL 341

Query: 182 EVTGDPGKMAAVLRNLSNFRIEELTIALRRERMRETAPFWRF-SAASYP 229
           E+TGD  KM A+ R L  + I E+    R   +RE+    ++    SYP
Sbjct: 342 ELTGDLDKMVALQRLLEPYGICEVARTGRIALVRESGVDSKYLRGYSYP 390