Jatropha Genome Database

JcCA0313461.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313461.20 + phase: 0 /partial
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g25600.1                                                       116   5e-27
Glyma03g25590.1                                                       102   7e-23
Glyma07g13220.1                                                       101   2e-22
Glyma16g34270.1                                                        69   9e-13
Glyma07g19600.1                                                        68   3e-12
Glyma16g34260.1                                                        68   3e-12
Glyma20g24350.1                                                        67   5e-12
Glyma16g34280.1                                                        66   8e-12
Glyma10g42700.1                                                        64   3e-11
Glyma20g00870.1                                                        64   4e-11
Glyma16g34250.1                                                        60   4e-10
Glyma09g34480.1                                                        60   4e-10
Glyma16g34240.1                                                        59   8e-10
Glyma17g21810.1                                                        57   4e-09
Glyma16g06180.1                                                        54   4e-08

>Glyma03g25600.1 
          Length = 283

 Score =  116 bits (291), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 64/73 (87%)

Query: 6  DELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLV 65
          D L+ AL KASM NKTVIIAV+NKAYV+  V+S+TTMLD+FL SFW GE TRSL+DHLL+
Sbjct: 1  DGLDTALAKASMGNKTVIIAVVNKAYVDQDVESDTTMLDIFLGSFWLGEGTRSLIDHLLL 60

Query: 66 VAVDQTAYDRCKF 78
          VAVDQTAYDRC+F
Sbjct: 61 VAVDQTAYDRCQF 73


>Glyma03g25590.1 
          Length = 271

 Score =  102 bits (255), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/64 (75%), Positives = 57/64 (89%)

Query: 17 MPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVAVDQTAYDRC 76
          M NKTVIIA++NKAYVE  V+S+TTMLD+FL SFW GE TRSL+DHLL+VAVDQTAY+RC
Sbjct: 1  MGNKTVIIAIVNKAYVEQDVESDTTMLDIFLGSFWLGEGTRSLIDHLLIVAVDQTAYNRC 60

Query: 77 KFKR 80
          +F R
Sbjct: 61 QFLR 64


>Glyma07g13220.1 
          Length = 284

 Score =  101 bits (251), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/64 (73%), Positives = 56/64 (87%)

Query: 17 MPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVAVDQTAYDRC 76
          M NKTVIIA++NKAYVE  V+S+TTMLD+FL SFW GE TRSL+DHLL+V VD+TAYDRC
Sbjct: 1  MENKTVIIAIVNKAYVEQDVESDTTMLDIFLGSFWLGEGTRSLIDHLLIVTVDRTAYDRC 60

Query: 77 KFKR 80
          +F R
Sbjct: 61 QFLR 64


>Glyma16g34270.1 
          Length = 280

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 7  ELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVV 66
          +LE  L  ASM +KTVII +LN A+ EP      +M DLFLESF  G +T+ LL+HL+ +
Sbjct: 3  KLESVLANASMKDKTVIITILNDAWAEPG-----SMFDLFLESFRLGNETQWLLNHLVAI 57

Query: 67 AVDQTAYDRC 76
            DQ  Y RC
Sbjct: 58 TWDQKTYARC 67


>Glyma07g19600.1 
          Length = 321

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 51/70 (72%), Gaps = 5/70 (7%)

Query: 8  LEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVA 67
          LE  L +A+M ++TVI+  LN+A+  P+     +++DLFLESF  G+ TR LL+HL+++A
Sbjct: 22 LENILSEAAMQDRTVILTTLNEAWAAPN-----SIIDLFLESFRIGDHTRRLLNHLVIIA 76

Query: 68 VDQTAYDRCK 77
          +DQ A+ RC+
Sbjct: 77 LDQKAFIRCQ 86


>Glyma16g34260.1 
          Length = 287

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 5/70 (7%)

Query: 7  ELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVV 66
          +LE  L+ ASM +KTVII  LN A+ +P      ++ DLFLESF  G  T+  L+HL+V+
Sbjct: 3  KLESVLRSASMKDKTVIITTLNDAWAKPG-----SIFDLFLESFRLGNQTKKFLNHLVVI 57

Query: 67 AVDQTAYDRC 76
           +DQ A+ RC
Sbjct: 58 TLDQKAHARC 67


>Glyma20g24350.1 
          Length = 364

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 5/70 (7%)

Query: 8   LEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVA 67
           LE  L +A+M ++TVI+  LN+A+  P+     +++DLFLESF  G+ T + LDHL+++A
Sbjct: 72  LEKILNEAAMKDRTVILTTLNEAWAAPN-----SVIDLFLESFRIGDRTSTFLDHLVIIA 126

Query: 68  VDQTAYDRCK 77
           +DQ A+ RC+
Sbjct: 127 LDQKAFARCQ 136


>Glyma16g34280.1 
          Length = 379

 Score = 65.9 bits (159), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 7   ELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVV 66
           +L+  L+ ASM +KTVII  LN A+ EP      ++ DLFLESF  G  T+  L+HL+V+
Sbjct: 78  KLQSVLRNASMKDKTVIITTLNDAWAEPG-----SIFDLFLESFHLGNQTKMFLNHLVVI 132

Query: 67  AVDQTAYDRC 76
             DQ A+ RC
Sbjct: 133 TWDQKAHARC 142


>Glyma10g42700.1 
          Length = 389

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 5/70 (7%)

Query: 8   LEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVA 67
           LE  L  A+M ++TVI+  LN+A+  P+     +++DLFLESF  G+ T + L+HL+++A
Sbjct: 97  LEKILNDAAMKDRTVILTTLNEAWATPN-----SVIDLFLESFRIGDRTSTFLNHLVIIA 151

Query: 68  VDQTAYDRCK 77
           +DQ A+ RC+
Sbjct: 152 LDQKAFARCQ 161


>Glyma20g00870.1 
          Length = 340

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 5/70 (7%)

Query: 8   LEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVA 67
           LE  L +A+M ++TVI+  LN+A+      +  +++DLFLESF  G+ TR LL+HL+++A
Sbjct: 46  LENILNEAAMQDRTVILTTLNEAWA-----ATNSIIDLFLESFRIGDRTRRLLNHLVIIA 100

Query: 68  VDQTAYDRCK 77
           +DQ A+ RC+
Sbjct: 101 LDQKAFMRCQ 110


>Glyma16g34250.1 
          Length = 275

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 7  ELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVV 66
          +LE  L+ ASM +KTVII  LN A+ EP      +M DLFLES   G  T+ L +HL+V+
Sbjct: 4  KLESVLRDASMKDKTVIITTLNDAWAEPG-----SMFDLFLESLQLGNGTQWLSNHLVVI 58

Query: 67 AVDQTAYDRC 76
            DQ    RC
Sbjct: 59 TWDQKTLARC 68


>Glyma09g34480.1 
          Length = 300

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 5/60 (8%)

Query: 17 MPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVVAVDQTAYDRC 76
          M +KTVII  LN A+ EP      ++ DLFLESF  G  T+  L+HL+V+  DQ A+ RC
Sbjct: 1  MKDKTVIITTLNDAWAEPG-----SIFDLFLESFRLGNQTKKFLNHLVVITWDQKAHARC 55


>Glyma16g34240.1 
          Length = 290

 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 5/76 (6%)

Query: 1  MQFSLDELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLL 60
          + + + +LE   + ASM +KTVII  LN A+ +P      ++ DLFLESF  G +T+ LL
Sbjct: 3  LGYQVFDLESVFRTASMKDKTVIITTLNDAWAKPG-----SVFDLFLESFRLGNETQWLL 57

Query: 61 DHLLVVAVDQTAYDRC 76
          +HL+V+  DQ     C
Sbjct: 58 NHLVVITWDQKTNAYC 73


>Glyma17g21810.1 
          Length = 280

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 49/71 (69%), Gaps = 5/71 (7%)

Query: 7  ELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLVV 66
          EL+  L++A MP+++VI+ ++NK+   P      ++LD+ L+SF  G+ T+ LL+H++++
Sbjct: 1  ELDDVLRRAIMPDRSVILTMVNKSMASPG-----SILDILLQSFKSGDGTQRLLNHMVII 55

Query: 67 AVDQTAYDRCK 77
           +D  A++ C+
Sbjct: 56 TMDPHAFEYCR 66


>Glyma16g06180.1 
          Length = 331

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 47/71 (66%), Gaps = 5/71 (7%)

Query: 6   DELEMALQKASMPNKTVIIAVLNKAYVEPSVKSETTMLDLFLESFWYGEDTRSLLDHLLV 65
           +EL+  L  A +P++TVI+ +++++   P      ++LD+ L+SF  GE T  LL+HL++
Sbjct: 54  EELDNVLWSAKLPDRTVILTMVDESMASPG-----SILDILLQSFKSGEGTERLLNHLVI 108

Query: 66  VAVDQTAYDRC 76
           +++D  A++ C
Sbjct: 109 ISMDPQAFEYC 119