Jatropha Genome Database

JcCA0313021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313021.10 + phase: 0 
         (284 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g40180.1                                                       421   e-118
Glyma08g18710.1                                                       419   e-117
Glyma19g41630.1                                                       293   1e-79
Glyma03g39050.1                                                       292   3e-79
Glyma09g04100.1                                                       285   3e-77

>Glyma15g40180.1 
          Length = 286

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/284 (70%), Positives = 241/284 (84%), Gaps = 2/284 (0%)

Query: 1   MAYLQ--NSIFETQISAEHLIARITEIHNSVSKLDSLRPSKQVNTLLTNLVNVCILPSSI 58
           MA  Q  N+  ET I  E LI +I ++H S+SKL++LRP KQVN+L T+LV +C LPSSI
Sbjct: 1   MASFQGINNNIETLIPPELLITQIMQLHASISKLETLRPCKQVNSLFTHLVKLCTLPSSI 60

Query: 59  DIKTLSPQVQEMRNSLINICGRAEGLLELEFAIFLNKIPEPVNNLNLFPYYGNYVKLANM 118
           DI++L  +VQ+MR SLIN+ GRAEGLLELEF+ F++  PEP+ N+ LFPYYGNYVKLANM
Sbjct: 61  DIESLPQEVQDMRESLINLSGRAEGLLELEFSTFISLTPEPMKNVTLFPYYGNYVKLANM 120

Query: 119 EIRILNENGIVQPKRVAFVGSGPMPLTSLVMATNHLKSTHFDNFDIDESANYVARQIVAS 178
           E +IL ENG+V PK+VAFVGSGPMPLTS+VMAT+H++STHFDNFDIDE AN VAR+IVAS
Sbjct: 121 ESKILTENGVVNPKKVAFVGSGPMPLTSIVMATHHMESTHFDNFDIDEKANEVARKIVAS 180

Query: 179 DTDLEKRMKFHTCDVMEVKEKFGEYDCIFLAALVGMSKEEKVKILGHVRKYMKAGGNLLL 238
           D  LEKRMKF T DVMEV+E+ G+YDCIFLAALVGMS+E KVKILGH+RKYMK GG LL+
Sbjct: 181 DVALEKRMKFETQDVMEVRERLGQYDCIFLAALVGMSREAKVKILGHIRKYMKEGGVLLV 240

Query: 239 RSANGARAFLYPVIEEDDLIGFEVLSIFHPNNEVINSVVLVRKP 282
           RSA GARAFLYP++EE D++ FEVL+IFHP N+VINSVVL+RKP
Sbjct: 241 RSAKGARAFLYPIVEERDMVNFEVLTIFHPTNDVINSVVLLRKP 284


>Glyma08g18710.1 
          Length = 286

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/284 (69%), Positives = 241/284 (84%), Gaps = 2/284 (0%)

Query: 1   MAYLQ--NSIFETQISAEHLIARITEIHNSVSKLDSLRPSKQVNTLLTNLVNVCILPSSI 58
           MA  Q  N+I   QI  E LI++I ++H S+SKL+SLRP KQVN+  T+LV +C LPS+I
Sbjct: 1   MAAFQSINNIETQQIPPELLISQIMQLHASISKLESLRPCKQVNSHFTHLVKLCTLPSTI 60

Query: 59  DIKTLSPQVQEMRNSLINICGRAEGLLELEFAIFLNKIPEPVNNLNLFPYYGNYVKLANM 118
           DI+ L  +VQ+MR+SLIN+ G AEGLLELEF+ F++  PEP+ N+ LFPYYGNYVKLANM
Sbjct: 61  DIEALPKEVQDMRDSLINLSGHAEGLLELEFSTFISLTPEPMKNVTLFPYYGNYVKLANM 120

Query: 119 EIRILNENGIVQPKRVAFVGSGPMPLTSLVMATNHLKSTHFDNFDIDESANYVARQIVAS 178
           E +IL ENG++ PK+VAFVGSGPMPLTS+VMAT+H++STHFDNFDIDE AN VAR+IVAS
Sbjct: 121 ESKILKENGVLSPKKVAFVGSGPMPLTSIVMATHHMESTHFDNFDIDEKANEVARKIVAS 180

Query: 179 DTDLEKRMKFHTCDVMEVKEKFGEYDCIFLAALVGMSKEEKVKILGHVRKYMKAGGNLLL 238
           D+ LEKRMKF T DVMEV+E+ G+YDCIFLAALVGMS+E KVKILGH+RKYMK GG LL+
Sbjct: 181 DSALEKRMKFETQDVMEVRERLGQYDCIFLAALVGMSREAKVKILGHIRKYMKEGGTLLV 240

Query: 239 RSANGARAFLYPVIEEDDLIGFEVLSIFHPNNEVINSVVLVRKP 282
           RSA GARAFLYP++EE D++ FEVL+IFHP N+VINSVVL+RKP
Sbjct: 241 RSAKGARAFLYPIVEERDMVNFEVLTIFHPTNDVINSVVLLRKP 284


>Glyma19g41630.1 
          Length = 315

 Score =  293 bits (750), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 141/266 (53%), Positives = 193/266 (72%)

Query: 16  EHLIARITEIHNSVSKLDSLRPSKQVNTLLTNLVNVCILPSSIDIKTLSPQVQEMRNSLI 75
           E LI ++  ++  +S L+SL+P K V+ L T LV  CI PS ID+  L+  VQ++R+ LI
Sbjct: 6   ELLIEKVCSLYEQISSLESLKPCKNVDMLFTKLVLTCIPPSPIDVTKLNKTVQDIRSHLI 65

Query: 76  NICGRAEGLLELEFAIFLNKIPEPVNNLNLFPYYGNYVKLANMEIRILNENGIVQPKRVA 135
            +CG AEG LE  ++  L    +P+N+LN+FPYY NY+KL ++E  IL+++    P +VA
Sbjct: 66  KLCGEAEGHLESHYSTILGSYDKPLNHLNIFPYYSNYLKLGHLEFTILSQHCTHVPTKVA 125

Query: 136 FVGSGPMPLTSLVMATNHLKSTHFDNFDIDESANYVARQIVASDTDLEKRMKFHTCDVME 195
           FVGSGP+PLTS+V+A+NHL ST F N+D+D  AN  A ++V+SD DL KRM FHT D++E
Sbjct: 126 FVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSDPDLSKRMFFHTNDILE 185

Query: 196 VKEKFGEYDCIFLAALVGMSKEEKVKILGHVRKYMKAGGNLLLRSANGARAFLYPVIEED 255
           V     EY+ ++LAALVGM KE K +I+ H+ K+M  G  L+LRSA+GARAFLYPV+E  
Sbjct: 186 VSNALKEYEVVYLAALVGMDKEGKNRIIDHLGKHMNPGALLMLRSAHGARAFLYPVVEPC 245

Query: 256 DLIGFEVLSIFHPNNEVINSVVLVRK 281
           D  GFEVLS+FHP++EVINSVV+ RK
Sbjct: 246 DFRGFEVLSVFHPSDEVINSVVIARK 271


>Glyma03g39050.1 
          Length = 321

 Score =  292 bits (747), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 141/266 (53%), Positives = 193/266 (72%)

Query: 16  EHLIARITEIHNSVSKLDSLRPSKQVNTLLTNLVNVCILPSSIDIKTLSPQVQEMRNSLI 75
           E LI ++  I+  +S L+SL+P K V+ L T LV  CI PS I++  L+  VQ++R+ LI
Sbjct: 6   ELLIEKVCSIYEQISSLESLKPCKNVDMLFTKLVLTCIPPSPIEVTKLNKTVQDIRSHLI 65

Query: 76  NICGRAEGLLELEFAIFLNKIPEPVNNLNLFPYYGNYVKLANMEIRILNENGIVQPKRVA 135
            +CG AEG LE  ++  L     P+++LN+FPYY NY+KL  +E  IL+++    P +VA
Sbjct: 66  KLCGEAEGHLESHYSTILGSYQNPLHHLNIFPYYSNYLKLGLLEFTILSQHCTHVPTKVA 125

Query: 136 FVGSGPMPLTSLVMATNHLKSTHFDNFDIDESANYVARQIVASDTDLEKRMKFHTCDVME 195
           FVGSGP+PLTS+V+A+NHL ST F N+D+D SAN  A ++V+SD DL KRM FHT D++E
Sbjct: 126 FVGSGPLPLTSIVLASNHLPSTTFHNYDMDPSANSNAMRLVSSDPDLSKRMFFHTNDILE 185

Query: 196 VKEKFGEYDCIFLAALVGMSKEEKVKILGHVRKYMKAGGNLLLRSANGARAFLYPVIEED 255
           V     EY+ ++LAALVGM KE K +I+ H+ K+M  G  L+LRSA+GARAFLYPV+E  
Sbjct: 186 VSTALKEYEVVYLAALVGMDKEGKNRIIDHLGKHMNPGALLMLRSAHGARAFLYPVVEPC 245

Query: 256 DLIGFEVLSIFHPNNEVINSVVLVRK 281
           DL GFEVLS+FHP++EV+NSVV+ RK
Sbjct: 246 DLRGFEVLSVFHPSDEVVNSVVIARK 271


>Glyma09g04100.1 
          Length = 309

 Score =  285 bits (730), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 133/264 (50%), Positives = 187/264 (70%), Gaps = 1/264 (0%)

Query: 19  IARITEIHNSVSKLDSLRPSKQVNTLLTNLVNVCILPSSIDIKTLSPQVQEMRNSLINIC 78
           + ++ EI+  +SKL+ L PS  VN L T LV +C  P  ID+  LS QV+E    LI +C
Sbjct: 10  VEKVCEIYEKISKLEDLNPSNHVNNLFTQLVTICTTPCQIDVTKLSQQVRETIAKLIRLC 69

Query: 79  GRAEGLLELEFAIFLNKIPEPVNNLNLFPYYGNYVKLANMEIRILNENGIVQPKRVAFVG 138
           G+AEGLLE  ++  +     P++++ LFPYY NY KL+++E  +L  +    P ++AFVG
Sbjct: 70  GKAEGLLENHYSTLIGSYENPLSHMKLFPYYSNYFKLSHLEFTMLTTHITQVPTQLAFVG 129

Query: 139 SGPMPLTSLVMATNHLKSTHFDNFDIDESANYVARQIVASDTDLEKRMKFHTCDVMEVKE 198
           SGP+PLTS+++AT++LK T F N+D+D  AN  A ++V+SDTDL KRM FHTCD++ V  
Sbjct: 130 SGPLPLTSIMLATHYLKHTCFHNYDMDPLANAKAHELVSSDTDLSKRMFFHTCDILNVSN 189

Query: 199 KFGEYDCIFLAALVGMSKEEKVKILGHVRKYMKAGGNLLLRSANGARAFLYPVIE-EDDL 257
              +Y+ +FLAALVGM  +EK +++ H+ K+M  G  LLLRSA+GARAFLYPV++   DL
Sbjct: 190 GLKDYNVVFLAALVGMDHKEKGRVISHLAKFMAPGAILLLRSAHGARAFLYPVVDPSSDL 249

Query: 258 IGFEVLSIFHPNNEVINSVVLVRK 281
            GFEVLS+FHP +EVINSV++ RK
Sbjct: 250 KGFEVLSVFHPTDEVINSVIVARK 273