Jatropha Genome Database

JcCA0312671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312671.10 + phase: 1 /pseudo/partial
         (346 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g02530.1                                                       230   2e-60
Glyma14g02530.2                                                       230   2e-60
Glyma02g46200.1                                                       226   2e-59
Glyma14g02530.3                                                       223   3e-58
Glyma10g34480.1                                                        51   2e-06
Glyma16g00590.1                                                        50   4e-06
Glyma20g33080.1                                                        50   5e-06
Glyma07g03930.2                                                        49   8e-06
Glyma07g03930.1                                                        49   8e-06

>Glyma14g02530.1 
          Length = 464

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/228 (54%), Positives = 151/228 (66%), Gaps = 19/228 (8%)

Query: 43  WLRACPMLXLLHFLREITTLVQSEYLFGFKSRSFSSDSGDLVDAVVPFMGESITDGTLAK 102
           W+ + PM  ++H    + TL           R FSS+SGD VD VVP + ESI+DGTLA+
Sbjct: 65  WINSKPMRVVIHPEATVQTL----------GRLFSSESGDTVDVVVPPLAESISDGTLAQ 114

Query: 103 FLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEGETVEPGTKIAVISKSGX 162
           FLK+PGDRV  DEPIAQIETDKVTIDV+SPE+G I KL+A EG+TVEPG KIA+IS+S  
Sbjct: 115 FLKRPGDRVNADEPIAQIETDKVTIDVSSPESGVILKLLANEGDTVEPGNKIAIISRSAD 174

Query: 163 XXXXXXXXXXXXXXXXXXXXXXSGGKQTPAVDSGPIKDSKRAPSAPQPPVKTPSSAPKPT 222
                                 S  K+ P V++ P K+  +AP         P+    PT
Sbjct: 175 ATHVAPSETTSEKGAPQPTQKVSEEKKAPKVETAPAKEKPKAP---------PAILKSPT 225

Query: 223 EPQLPPKDRERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDISVLI 270
           EPQLPPK+RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVD++ L+
Sbjct: 226 EPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLM 273


>Glyma14g02530.2 
          Length = 461

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/228 (54%), Positives = 151/228 (66%), Gaps = 19/228 (8%)

Query: 43  WLRACPMLXLLHFLREITTLVQSEYLFGFKSRSFSSDSGDLVDAVVPFMGESITDGTLAK 102
           W+ + PM  ++H    + TL           R FSS+SGD VD VVP + ESI+DGTLA+
Sbjct: 62  WINSKPMRVVIHPEATVQTL----------GRLFSSESGDTVDVVVPPLAESISDGTLAQ 111

Query: 103 FLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEGETVEPGTKIAVISKSGX 162
           FLK+PGDRV  DEPIAQIETDKVTIDV+SPE+G I KL+A EG+TVEPG KIA+IS+S  
Sbjct: 112 FLKRPGDRVNADEPIAQIETDKVTIDVSSPESGVILKLLANEGDTVEPGNKIAIISRSAD 171

Query: 163 XXXXXXXXXXXXXXXXXXXXXXSGGKQTPAVDSGPIKDSKRAPSAPQPPVKTPSSAPKPT 222
                                 S  K+ P V++ P K+  +AP         P+    PT
Sbjct: 172 ATHVAPSETTSEKGAPQPTQKVSEEKKAPKVETAPAKEKPKAP---------PAILKSPT 222

Query: 223 EPQLPPKDRERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDISVLI 270
           EPQLPPK+RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVD++ L+
Sbjct: 223 EPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLM 270


>Glyma02g46200.1 
          Length = 464

 Score =  226 bits (577), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/228 (53%), Positives = 150/228 (65%), Gaps = 19/228 (8%)

Query: 43  WLRACPMLXLLHFLREITTLVQSEYLFGFKSRSFSSDSGDLVDAVVPFMGESITDGTLAK 102
           W+ + PM  ++H    + T            R FSS+SGD VD VVP + ESI+DGTLA+
Sbjct: 65  WINSKPMRVVIHPEATVRTW----------GRLFSSESGDTVDVVVPPLAESISDGTLAQ 114

Query: 103 FLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEGETVEPGTKIAVISKSGX 162
           FLK+PGDRV  DEPIAQIETDKVTIDV+SPE+G I KL+A EG+TVEPG KIA+IS+S  
Sbjct: 115 FLKRPGDRVNADEPIAQIETDKVTIDVSSPESGVILKLLANEGDTVEPGNKIAIISRSAD 174

Query: 163 XXXXXXXXXXXXXXXXXXXXXXSGGKQTPAVDSGPIKDSKRAPSAPQPPVKTPSSAPKPT 222
                                 S  K+ P V++ P K+  + P         P++   PT
Sbjct: 175 ATHVAPSETISEKAAPQPTQKVSEEKKAPKVETAPAKEKPKTP---------PATLKSPT 225

Query: 223 EPQLPPKDRERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDISVLI 270
           EPQLPPK+RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVD++ L+
Sbjct: 226 EPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLM 273


>Glyma14g02530.3 
          Length = 463

 Score =  223 bits (568), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/228 (54%), Positives = 150/228 (65%), Gaps = 20/228 (8%)

Query: 43  WLRACPMLXLLHFLREITTLVQSEYLFGFKSRSFSSDSGDLVDAVVPFMGESITDGTLAK 102
           W+ + PM  ++H    + TL           R FSS+S D VD VVP + ESI+DGTLA+
Sbjct: 65  WINSKPMRVVIHPEATVQTL----------GRLFSSES-DTVDVVVPPLAESISDGTLAQ 113

Query: 103 FLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEGETVEPGTKIAVISKSGX 162
           FLK+PGDRV  DEPIAQIETDKVTIDV+SPE+G I KL+A EG+TVEPG KIA+IS+S  
Sbjct: 114 FLKRPGDRVNADEPIAQIETDKVTIDVSSPESGVILKLLANEGDTVEPGNKIAIISRSAD 173

Query: 163 XXXXXXXXXXXXXXXXXXXXXXSGGKQTPAVDSGPIKDSKRAPSAPQPPVKTPSSAPKPT 222
                                 S  K+ P V++ P K+  +AP         P+    PT
Sbjct: 174 ATHVAPSETTSEKGAPQPTQKVSEEKKAPKVETAPAKEKPKAP---------PAILKSPT 224

Query: 223 EPQLPPKDRERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDISVLI 270
           EPQLPPK+RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVD++ L+
Sbjct: 225 EPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLM 272


>Glyma10g34480.1 
          Length = 626

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 88  VPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-E 146
           +P +  ++  G +AK+ K+ GD++EV + + +IETDK T++  S E G + K++A EG +
Sbjct: 127 MPALSPTMNQGNIAKWRKQEGDKIEVGDILCEIETDKATLEFESLEEGYLAKILAPEGSK 186

Query: 147 TVEPGTKIAV 156
            V  G  IA+
Sbjct: 187 EVAVGHSIAI 196



 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 88  VPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEGET 147
           +P +  ++T G +AK+ KK G+++EV + + +IETDK T++  S E G + K++  EG  
Sbjct: 1   MPALSPTMTQGNIAKWRKKEGEKIEVGDVLCEIETDKATLEFESLEEGFLAKILVPEGSK 60

Query: 148 VEP-GTKIAV 156
             P G  IA+
Sbjct: 61  DVPVGQPIAI 70


>Glyma16g00590.1 
          Length = 547

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 88  VPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-E 146
           +P +  ++T+G +A++LKK GDR+   E + ++ETDK T+++   E G + K++  +G +
Sbjct: 122 MPSLSPTMTEGNIARWLKKEGDRISPGEVLCEVETDKATVEMECMEEGFLAKIIRGDGAK 181

Query: 147 TVEPGTKIAV 156
            ++ G  IAV
Sbjct: 182 EIKVGEVIAV 191


>Glyma20g33080.1 
          Length = 628

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 77  SSDSGDLVDAVVPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGT 136
           SSDS   V  + P +  ++T G +AK+ KK G+++EV + + +IETDK T++  S E G 
Sbjct: 72  SSDSSHEVLGM-PALSPTMTQGNIAKWRKKEGEKIEVGDVLCEIETDKATLEFESLEEGF 130

Query: 137 IQKLVAKEGETVEP-GTKIAV 156
           + K++  EG    P G  IA+
Sbjct: 131 LAKILVPEGSKDVPVGQPIAI 151



 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 88  VPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-E 146
           +P +  ++  G +AK+ K+ GD++EV + + +IETDK T++  + E G + K++A EG +
Sbjct: 208 MPALSPTMNQGNIAKWRKQEGDKIEVGDILCEIETDKATLEFETLEEGYLAKILAPEGSK 267

Query: 147 TVEPGTKIAV 156
            V  G  IA+
Sbjct: 268 EVAVGHPIAI 277


>Glyma07g03930.2 
          Length = 546

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 88  VPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-E 146
           +P +  ++T+G +A++LKK GD++   E + ++ETDK T+++   E G + K++  +G +
Sbjct: 121 MPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGYLAKIIRGDGAK 180

Query: 147 TVEPGTKIAV 156
            ++ G  IAV
Sbjct: 181 EIKVGEVIAV 190


>Glyma07g03930.1 
          Length = 547

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 88  VPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-E 146
           +P +  ++T+G +A++LKK GD++   E + ++ETDK T+++   E G + K++  +G +
Sbjct: 122 MPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGYLAKIIRGDGAK 181

Query: 147 TVEPGTKIAV 156
            ++ G  IAV
Sbjct: 182 EIKVGEVIAV 191