Jatropha Genome Database

JcCA0312651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312651.10 + phase: 0 /partial
         (357 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g09900.1                                                       258   1e-68
Glyma12g02210.1                                                       221   1e-57
Glyma01g10180.1                                                       129   4e-30
Glyma17g30850.1                                                       101   1e-21
Glyma06g22090.1                                                        92   9e-19

>Glyma11g09900.1 
          Length = 482

 Score =  258 bits (658), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 165/340 (48%), Positives = 213/340 (62%), Gaps = 16/340 (4%)

Query: 18  QRRSRHKCIEVRNCGNFDKQAHLLQRRLEKFAGESDEACVKEIQEMAEASLSIKXXXXXX 77
            +RS+ K +  R   NFDKQ  +LQRRL+K  G SDE  ++E QEM   S SIK      
Sbjct: 155 HKRSKVKDLGARKNRNFDKQVSVLQRRLDKIGGSSDEIYLREFQEMENISFSIKRSSTVD 214

Query: 78  XXXXXXXXXANMEILRKKMEGLSKEHLLERMEEECGPMLSTANTSGSSSVANCKRIELQE 137
                     N+EILR+KMEGLSK  LL+RMEEE   +LSTA++S +SS +N KR+E Q+
Sbjct: 215 DNVVASGK-LNVEILRRKMEGLSKGILLQRMEEEYNSLLSTASSSLASSGSNSKRVEFQD 273

Query: 138 MSSSSMRPQSKERKLYEERACSGCCKAIVQRVVEQVRAETEQWSQMQEMLGQVRDEMEEL 197
             SSS+R   +E+   E   CSG CK +V+R+VEQVR ETEQWSQMQEMLG+VR+EMEEL
Sbjct: 274 --SSSVRVPHQEKLSCEGNPCSGHCKTVVRRIVEQVRTETEQWSQMQEMLGKVREEMEEL 331

Query: 198 QASRDFWEDRALDSDYQIQSLQSAVKEWRRKAVSSEAKANELQAQVMXXXXXXXXXXXXX 257
           QASRDFWEDRA  SD+QIQSL +AV+EW+ KA+SSE K NE++A++              
Sbjct: 332 QASRDFWEDRARHSDFQIQSLHNAVQEWKEKALSSENKTNEVEAELSVLRGDLERLRKEQ 391

Query: 258 XXXTIRTKNQK-LNPHTESPNEMEKRVLVCRLKENRQANCGDGSKQKEMFADGRKKSHSL 316
                  K  K L+   ++ NE+EKR++VC  KE       D  +  E  A G ++    
Sbjct: 392 NA----AKGTKCLSIPVDTQNELEKRIVVCNSKEK-----NDVLRSGERKAHGGRRGGGF 442

Query: 317 NASKRSPFREIGNSSSPL---SRQNSRAVFPLRCSIPSNL 353
            A KRSP R+IGNSSS L      N +AVFPLRC + S++
Sbjct: 443 LAPKRSPLRDIGNSSSSLLMKQNNNGKAVFPLRCHLSSDV 482


>Glyma12g02210.1 
          Length = 465

 Score =  221 bits (563), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 184/329 (55%), Gaps = 41/329 (12%)

Query: 18  QRRSRHKCIEVRNCGNFDKQAHLLQRRLEKFAGESDEACVKEIQEMAEASLSIKXXXXXX 77
            RRS+ K +  R   NFDKQ  +LQRRLE+  G SDE  ++E QEM   SLSIK      
Sbjct: 170 HRRSKVKDLGARKNRNFDKQVSVLQRRLEQIGGSSDEIYLREFQEMENISLSIKRSSIVD 229

Query: 78  XXXXXXXXXANMEILRKKMEGLSKEHLLERMEEECGPMLSTANTSGSSSVANCKRIELQE 137
                     N+EILR+KMEGLSK  LL+RMEEE                 N        
Sbjct: 230 DNVVASGK-LNVEILRRKMEGLSKGILLQRMEEEY----------------NSLLSTASS 272

Query: 138 MSSSSMRPQSKERKLYEERACSGCCKAIVQRVVEQVRAETEQWSQMQEMLGQVRDEMEEL 197
             +SS  P            CSG CK +V+R+VEQVR ETEQWSQMQEMLG+VR+EMEEL
Sbjct: 273 SLASSGNP------------CSGHCKTVVRRIVEQVRTETEQWSQMQEMLGKVREEMEEL 320

Query: 198 QASRDFWEDRALDSDYQIQSLQSAVKEWRRKAVSSEAKANELQAQVMXXXXXXXXXXXXX 257
           QASRDFWEDRA  SD+QIQSL +AV+EW+ KA+SSE+K NEL+A++              
Sbjct: 321 QASRDFWEDRARHSDFQIQSLHNAVQEWKEKALSSESKTNELEAELSVLRGDLRKEQTA- 379

Query: 258 XXXTIRTKNQKLNPH-TESPNEMEKRVLVCRLKENRQANCGDGSKQKEMF--ADGRKKSH 314
                  K  K +P   ++ NE+EKR++VC  KE  +    + SK  ++   A G +   
Sbjct: 380 ------AKGIKCSPTPVDTQNELEKRIVVCSSKEKNKVT--ENSKHNDVSRKAHGGRGGD 431

Query: 315 SLNASKRSPFREIGNSSSPLSRQNSRAVF 343
            L   KRSP R+IGNSS  +++  S  V 
Sbjct: 432 GLLVPKRSPLRDIGNSSLLITQNLSSFVI 460


>Glyma01g10180.1 
          Length = 219

 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/190 (43%), Positives = 107/190 (56%), Gaps = 29/190 (15%)

Query: 152 LYEERACSGCCKAIVQRVVEQVRAETEQWSQMQEMLGQVRDEMEELQASRDFWEDRALDS 211
           L  +RAC  C   I ++  E     TEQWSQMQEMLG VR+EMEELQASRDFWEDRA  S
Sbjct: 58  LARKRAC--CDNHICRKSTE-----TEQWSQMQEMLGNVREEMEELQASRDFWEDRARHS 110

Query: 212 DYQIQSLQSAVKEWRRKAVSSEAKANELQAQVMXXXXXXXXXXXXXXXXTIRTKNQKLNP 271
           D+QIQSL +AV+EW+ K +SSE K NE++                      +     +N 
Sbjct: 111 DFQIQSLHNAVQEWKEKTLSSENKTNEIEEGT----------------ECSKRDQMFINS 154

Query: 272 HTESPNEMEKRVLVCRLKENRQANCGDGSKQKEMFADGRKKSHSLNASKRSPFREIGNSS 331
           H  + NE+EKR++VC  KE       D  +  E    G ++     A KRSP ++IGNSS
Sbjct: 155 HGHT-NELEKRIVVCNSKEK-----NDFLRSGERKGHGCRRGGGFLALKRSPLQDIGNSS 208

Query: 332 SPLSRQNSRA 341
           S L +QN+  
Sbjct: 209 SLLMKQNNNG 218


>Glyma17g30850.1 
          Length = 223

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 76/122 (62%), Gaps = 1/122 (0%)

Query: 18  QRRSRHKCIEVRNCGNFDKQAHLLQRRLEKFAGESDEACVKEIQEMAEASLSIKXXXXXX 77
            RRS+ K +  R   NFDKQ  +LQRRLE+  G SDE  ++E QEM   SLSIK      
Sbjct: 48  HRRSKVKDLGARKNRNFDKQVSVLQRRLEQIGGSSDEIYLREFQEMENISLSIKRSSIAD 107

Query: 78  XXXXXXXXXANMEILRKKMEGLSKEHLLERMEEECGPMLSTANTSGSSSVANCKRIELQE 137
                     N+EILR+KMEGLSK  LL+RMEEE   +LSTA+ S +SS +N KR+E Q+
Sbjct: 108 DNVVASGK-LNVEILRRKMEGLSKGILLQRMEEEYNSVLSTASNSLASSGSNSKRLEYQD 166

Query: 138 MS 139
            S
Sbjct: 167 SS 168


>Glyma06g22090.1 
          Length = 196

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/102 (51%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 18  QRRSRHKCIEVRNCGNFDKQAHLLQRRLEKFAGESDEACVKEIQEMAEASLSIKXXXXXX 77
            RRS+ K +  R   NFDKQ  +LQRRLE+  G SDE C++E QEM   SLSIK      
Sbjct: 30  HRRSKVKDLGARKNRNFDKQVSVLQRRLEQIGGSSDEICLREFQEMENISLSIK-RSSIV 88

Query: 78  XXXXXXXXXANMEILRKKMEGLSKEHLLERMEEECGPMLSTA 119
                     N+EILR+KMEGLSK  LL+RMEEE   +LSTA
Sbjct: 89  DDNVVASGKLNVEILRRKMEGLSKGILLQRMEEEYNSLLSTA 130