Jatropha Genome Database

JcCA0312361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312361.10 + phase: 0 
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g21080.1                                                       212   8e-56
Glyma04g33180.2                                                       209   8e-55
Glyma04g33180.1                                                       209   8e-55
Glyma02g05560.1                                                        60   7e-10
Glyma16g24140.1                                                        60   9e-10
Glyma02g44730.1                                                        52   3e-07
Glyma14g04000.2                                                        51   5e-07
Glyma14g04000.1                                                        50   6e-07
Glyma14g04000.3                                                        50   7e-07
Glyma04g20880.1                                                        50   8e-07

>Glyma06g21080.1 
          Length = 188

 Score =  212 bits (540), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 97/104 (93%), Positives = 101/104 (97%)

Query: 42  TCTYVKARHILCEKQGKINEAYQKLQDGWLNNGDKVPPAEFAKLAAEYSECPSGKKGGDL 101
           TCTYVKARHILCEKQGKINEAY+KLQDGWL NGDKVPPAEFAK+A EYSECPSGKKGGDL
Sbjct: 85  TCTYVKARHILCEKQGKINEAYKKLQDGWLGNGDKVPPAEFAKVAQEYSECPSGKKGGDL 144

Query: 102 GWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVILCEGRKN 145
           GWFPRGKMAGPFQEVAFNTP+GATSAPFKSTHGYH+IL EGRKN
Sbjct: 145 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSEGRKN 188


>Glyma04g33180.2 
          Length = 146

 Score =  209 bits (532), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 96/104 (92%), Positives = 101/104 (97%)

Query: 42  TCTYVKARHILCEKQGKINEAYQKLQDGWLNNGDKVPPAEFAKLAAEYSECPSGKKGGDL 101
           TCTYVKARHILCEKQGKINEAY+KLQDGWL NGDKVPPAEFAK+A EYSECPSGKKGGDL
Sbjct: 43  TCTYVKARHILCEKQGKINEAYKKLQDGWLCNGDKVPPAEFAKIAQEYSECPSGKKGGDL 102

Query: 102 GWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVILCEGRKN 145
           GWFPRGKMAGPFQ+VAFNTP+GATSAPFKSTHGYH+IL EGRKN
Sbjct: 103 GWFPRGKMAGPFQDVAFNTPVGATSAPFKSTHGYHIILSEGRKN 146


>Glyma04g33180.1 
          Length = 146

 Score =  209 bits (532), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 96/104 (92%), Positives = 101/104 (97%)

Query: 42  TCTYVKARHILCEKQGKINEAYQKLQDGWLNNGDKVPPAEFAKLAAEYSECPSGKKGGDL 101
           TCTYVKARHILCEKQGKINEAY+KLQDGWL NGDKVPPAEFAK+A EYSECPSGKKGGDL
Sbjct: 43  TCTYVKARHILCEKQGKINEAYKKLQDGWLCNGDKVPPAEFAKIAQEYSECPSGKKGGDL 102

Query: 102 GWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVILCEGRKN 145
           GWFPRGKMAGPFQ+VAFNTP+GATSAPFKSTHGYH+IL EGRKN
Sbjct: 103 GWFPRGKMAGPFQDVAFNTPVGATSAPFKSTHGYHIILSEGRKN 146


>Glyma02g05560.1 
          Length = 126

 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 16/109 (14%)

Query: 46  VKARHILCEKQGKINEAYQKLQDGWLNNG--------------DKVPP--AEFAKLAAEY 89
           V+A HIL + +G   +A  K  +G +                 D +    A F  +A+ +
Sbjct: 14  VRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSGKATFEDIASRF 73

Query: 90  SECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           S+C S K+GGDLG F RG+M  PF+E  F   IG  S    +  G H+I
Sbjct: 74  SDCSSAKRGGDLGPFGRGQMQKPFEEATFALKIGEISDIVDTDSGVHII 122


>Glyma16g24140.1 
          Length = 126

 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)

Query: 46  VKARHILCEKQGKINEAYQKLQDGWLNNG--------------DKVPP--AEFAKLAAEY 89
           V+A HIL + +G   +A  K  +G +                 D +    A F  +A+ +
Sbjct: 14  VRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSGKASFEDIASRF 73

Query: 90  SECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           S+C S K+GGDLG F RG+M  PF+E  F   +G  S    +  G H+I
Sbjct: 74  SDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHII 122


>Glyma02g44730.1 
          Length = 292

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 47  KARHILCEKQGKINEAYQKLQDGWLNNGDKVPPAE-FAKLAAEYSECPSGKKGGDLGWFP 105
           + R IL +    + E  QKL    L+   ++   E  + LA EYS CPS ++GG LGW  
Sbjct: 83  RPREILVQ-HLLVKEDDQKL---LLDIQQRISSGEDLSDLAVEYSLCPSKEEGGMLGWVR 138

Query: 106 RGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           +G+M   F+E AF  P+    +  K+  G+H++
Sbjct: 139 KGQMVPEFEEAAFTAPLNKVVS-CKTKFGWHLL 170


>Glyma14g04000.2 
          Length = 221

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 81  EFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           + + LA EYS CPS ++GG LGW  +G+M   F+E AF  P+       K+  G+H++
Sbjct: 113 DLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNQV-VRCKTKFGWHLL 169


>Glyma14g04000.1 
          Length = 291

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 81  EFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           + + LA EYS CPS ++GG LGW  +G+M   F+E AF  P+       K+  G+H++
Sbjct: 113 DLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNQV-VRCKTKFGWHLL 169


>Glyma14g04000.3 
          Length = 274

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 13/95 (13%)

Query: 46  VKARHILCEKQGKINEAY--QKLQDGWLNNGDKVPPAEFAKLAAEYSECPSGKKGGDLGW 103
           +  +H+L ++  +    Y  QK+  G           + + LA EYS CPS ++GG LGW
Sbjct: 86  ILVQHLLVKEDDQKLLLYLQQKISSG----------EDLSDLAVEYSLCPSKEEGGMLGW 135

Query: 104 FPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
             +G+M   F+E AF  P+       K+  G+H++
Sbjct: 136 VRKGQMVPEFEEAAFTAPLNQVVR-CKTKFGWHLL 169


>Glyma04g20880.1 
          Length = 29

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 26/29 (89%)

Query: 48 ARHILCEKQGKINEAYQKLQDGWLNNGDK 76
          AR+ LCEKQGKINE Y+KL+DGWL+N DK
Sbjct: 1  ARNALCEKQGKINEVYKKLRDGWLSNPDK 29