Jatropha Genome Database

JcCA0312091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312091.10 - phase: 0 /partial
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g06010.1                                                       126   7e-30
Glyma19g26120.1                                                       121   2e-28
Glyma14g38420.1                                                       105   2e-23
Glyma02g40220.1                                                       102   1e-22
Glyma02g40220.2                                                       102   2e-22
Glyma16g02900.1                                                        94   7e-20
Glyma07g06250.1                                                        93   8e-20
Glyma07g06250.2                                                        93   8e-20
Glyma19g26130.1                                                        79   2e-15
Glyma04g36300.1                                                        73   1e-13
Glyma06g14940.1                                                        72   2e-13
Glyma06g13160.1                                                        66   1e-11

>Glyma16g06010.1 
          Length = 632

 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 82/114 (71%), Gaps = 1/114 (0%)

Query: 26  LSIDPELWLMAXXXXXXXXXXXXPTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLK 85
           LSID ELW MA            P + SE  RK+VIDY++RLI+GYY  EV P GSVPLK
Sbjct: 17  LSIDEELWRMAEERAQEILWTIEPIVLSEVNRKDVIDYVQRLIRGYYGAEVLPFGSVPLK 76

Query: 86  TYLPDGDIDLTVLSYQNMEEDLAREVYNMLKYEEQHPMSEVKDVQYIQAQVKIL 139
           TYLPDGDIDLT LS+++ EEDLA+ V N+L+  +  P  +VKD+QYI+AQV+++
Sbjct: 77  TYLPDGDIDLTALSHEDAEEDLAQAVCNILQSGDD-PEYQVKDIQYIRAQVRLV 129


>Glyma19g26120.1 
          Length = 444

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 81/114 (71%), Gaps = 1/114 (0%)

Query: 26  LSIDPELWLMAXXXXXXXXXXXXPTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLK 85
           LSID ELW MA            P + SE  RK+VIDY++RLI+GYY  EV P GSVPLK
Sbjct: 6   LSIDKELWQMAEERAQEILWTIQPNVLSEVNRKDVIDYVQRLIRGYYGAEVLPFGSVPLK 65

Query: 86  TYLPDGDIDLTVLSYQNMEEDLAREVYNMLKYEEQHPMSEVKDVQYIQAQVKIL 139
           TYLPDGDIDLT LS+++ EEDLA+ V  +L+  +  P  +VKD++YI+AQV+++
Sbjct: 66  TYLPDGDIDLTALSHEDAEEDLAQAVCYVLQSGDD-PEYQVKDIKYIRAQVRLV 118


>Glyma14g38420.1 
          Length = 779

 Score =  105 bits (262), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/93 (56%), Positives = 72/93 (77%), Gaps = 2/93 (2%)

Query: 49  PTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLKTYLPDGDIDLTVLSYQNMEEDLA 108
           PTLA++++R+EV+DY++RLI+     EVFP GSVPLKTYLPDGDIDLT LS QN+E+ L 
Sbjct: 57  PTLAADRRRREVVDYVQRLIRYGARCEVFPYGSVPLKTYLPDGDIDLTALSCQNIEDGLV 116

Query: 109 REVYNMLKYEEQHPMS--EVKDVQYIQAQVKIL 139
            +V  +L  EE +  S  EVKDV++I A+VK++
Sbjct: 117 SDVRAVLHGEEINEASEYEVKDVRFIDAEVKLV 149


>Glyma02g40220.1 
          Length = 819

 Score =  102 bits (255), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/93 (54%), Positives = 72/93 (77%), Gaps = 2/93 (2%)

Query: 49  PTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLKTYLPDGDIDLTVLSYQNMEEDLA 108
           PTLA++++R+EV+DY++RLI+     EVFP GSVPLKTYLPDGDIDLT LS +N+E+ L 
Sbjct: 57  PTLAADRRRREVVDYVQRLIRYGARCEVFPYGSVPLKTYLPDGDIDLTALSCENIEDGLV 116

Query: 109 REVYNMLKYEEQHPMS--EVKDVQYIQAQVKIL 139
            +V  +L  EE +  +  EVKDV++I A+VK++
Sbjct: 117 SDVRAVLHGEEINEAAEYEVKDVRFIDAEVKLV 149


>Glyma02g40220.2 
          Length = 817

 Score =  102 bits (253), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/93 (54%), Positives = 72/93 (77%), Gaps = 2/93 (2%)

Query: 49  PTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLKTYLPDGDIDLTVLSYQNMEEDLA 108
           PTLA++++R+EV+DY++RLI+     EVFP GSVPLKTYLPDGDIDLT LS +N+E+ L 
Sbjct: 57  PTLAADRRRREVVDYVQRLIRYGARCEVFPYGSVPLKTYLPDGDIDLTALSCENIEDGLV 116

Query: 109 REVYNMLKYEEQHPMS--EVKDVQYIQAQVKIL 139
            +V  +L  EE +  +  EVKDV++I A+VK++
Sbjct: 117 SDVRAVLHGEEINEAAEYEVKDVRFIDAEVKLV 149


>Glyma16g02900.1 
          Length = 1321

 Score = 93.6 bits (231), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 3/115 (2%)

Query: 28  IDPELWLMAXXXXXXXXXXXXPTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLKTY 87
           +D E WL A            P   SE++R  V DY++RLI   +  +VF  GSVPLKTY
Sbjct: 31  LDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTY 90

Query: 88  LPDGDIDLTVLSY-QNMEEDLAREVYNMLKYEEQHPMS--EVKDVQYIQAQVKIL 139
           LPDGDIDLT  S  QN+++  A +V +ML+ EE++  +   VK+VQYIQA+VKI+
Sbjct: 91  LPDGDIDLTAFSKNQNLKDSWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKII 145


>Glyma07g06250.1 
          Length = 1322

 Score = 93.2 bits (230), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 3/115 (2%)

Query: 28  IDPELWLMAXXXXXXXXXXXXPTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLKTY 87
           +D E WL A            P   SE++R  V DY++RLI   +  +VF  GSVPLKTY
Sbjct: 31  LDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTY 90

Query: 88  LPDGDIDLTVLSY-QNMEEDLAREVYNMLKYEEQHPMS--EVKDVQYIQAQVKIL 139
           LPDGDIDLT  S  QN+++  A +V +ML+ EE++  +   VK+VQYIQA+VKI+
Sbjct: 91  LPDGDIDLTAFSKNQNLKDSWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKII 145


>Glyma07g06250.2 
          Length = 1317

 Score = 93.2 bits (230), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 3/115 (2%)

Query: 28  IDPELWLMAXXXXXXXXXXXXPTLASEQKRKEVIDYIRRLIKGYYATEVFPSGSVPLKTY 87
           +D E WL A            P   SE++R  V DY++RLI   +  +VF  GSVPLKTY
Sbjct: 31  LDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTY 90

Query: 88  LPDGDIDLTVLSY-QNMEEDLAREVYNMLKYEEQHPMS--EVKDVQYIQAQVKIL 139
           LPDGDIDLT  S  QN+++  A +V +ML+ EE++  +   VK+VQYIQA+VKI+
Sbjct: 91  LPDGDIDLTAFSKNQNLKDSWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKII 145


>Glyma19g26130.1 
          Length = 362

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 75  EVFPSGSVPLKTYLPDGDIDLTVLSYQNMEEDLAREVYNMLKYEEQHPMSEVKDVQYIQA 134
           +VFP GS PLKTYLPDGDIDLT LS+++ EEDL R V N+LK E+     +VKD+++I+A
Sbjct: 6   QVFPFGSFPLKTYLPDGDIDLTALSHEDEEEDLVRAVCNILKSEDDSEY-QVKDIEHIRA 64

Query: 135 QVKIL 139
           QV+++
Sbjct: 65  QVQVV 69


>Glyma04g36300.1 
          Length = 362

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 76  VFPSGSVPLKTYLPDGDIDLTVLSYQNMEEDLAREVYNMLKYEEQHPMSEVKDVQYIQAQ 135
           V P GSVPLKTYLPDGD+DLT L +++ E+DLA+ + N+LK  +     +VKD+QYI+AQ
Sbjct: 1   VLPFGSVPLKTYLPDGDVDLTTLIHEDAEDDLAQAICNVLKSGDDSEY-QVKDIQYIRAQ 59

Query: 136 VKIL 139
           V+++
Sbjct: 60  VRLV 63


>Glyma06g14940.1 
          Length = 367

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 75  EVFPSGSVPLKTYLPDGDIDLTVLSYQNMEEDLAREVYNMLKYEEQHPMSEVKDVQYIQA 134
           +VFP GS PLKTYLPDGDIDLTV+++++ EE+LA+E+  +L+      + +VKD+++I+A
Sbjct: 1   QVFPFGSFPLKTYLPDGDIDLTVINHEDEEENLAKEICTILECAND-LIYQVKDIEHIRA 59

Query: 135 QVKIL 139
           QV+++
Sbjct: 60  QVQVV 64


>Glyma06g13160.1 
          Length = 795

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 3/67 (4%)

Query: 76  VFPSGSVPLKTYLPDGDIDLTVLSY-QNMEEDLAREVYNMLKYEEQHPMSE--VKDVQYI 132
           VF  GSVPLKTYLPDGDIDL V +  Q+ E+ L ++V N+L+ +  +  SE  VK+VQYI
Sbjct: 51  VFTFGSVPLKTYLPDGDIDLAVFAENQHSEDRLIQDVRNILENQGTNEDSEFHVKEVQYI 110

Query: 133 QAQVKIL 139
           Q +VKI+
Sbjct: 111 QGEVKII 117