Jatropha Genome Database

JcCA0311741.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311741.20 - phase: 0 
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g18510.1                                                       406   e-113
Glyma01g30350.1                                                       121   8e-28
Glyma04g36390.1                                                       105   4e-23
Glyma19g32770.1                                                        78   8e-15
Glyma19g32770.2                                                        76   3e-14
Glyma03g29870.1                                                        72   6e-13
Glyma03g07830.1                                                        57   2e-08

>Glyma06g18510.1 
          Length = 290

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 183/236 (77%), Positives = 219/236 (92%)

Query: 1   MQTGDEDYDLKQMRDMAAAKRRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQ 60
           +Q  +ED++LKQMRDMAAA++RW+A+IR+GK+ VLTPREAGYA+QLS+K LLDVRPS E 
Sbjct: 55  VQAENEDFELKQMRDMAAARKRWEALIRDGKIKVLTPREAGYAVQLSNKPLLDVRPSNEH 114

Query: 61  KKAWVKGSTWIPIFEVDDRSDIGTLSKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFPK 120
           KKAWV+ STWIPIF+VD++ D GT+ +K T+F+MGGWWSG+PTL+YD+QFL+KVEEKFPK
Sbjct: 115 KKAWVRASTWIPIFDVDNKLDFGTIPRKVTSFVMGGWWSGMPTLSYDSQFLAKVEEKFPK 174

Query: 121 DTDLIVACQRGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVIEGPQPLKFAGIGGV 180
           D +LIV CQ+GLRSLAACELLYNAGY+NLFWVQGG EAAEEEDL++EGP PLKFAGIGGV
Sbjct: 175 DAELIVVCQKGLRSLAACELLYNAGYKNLFWVQGGYEAAEEEDLIVEGPMPLKFAGIGGV 234

Query: 181 SEFLGWTDQQRAAAAKEGWGYRLLFSARLIGVFLVADALFLGAQQVGRYIQDIRSH 236
           SEFLGWTDQQRAAAAKEGWGYRL+FSARLIG+ LV DAL++GAQQ+GRY+QDIR+H
Sbjct: 235 SEFLGWTDQQRAAAAKEGWGYRLVFSARLIGLILVVDALYIGAQQIGRYLQDIRTH 290


>Glyma01g30350.1 
          Length = 216

 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 2/158 (1%)

Query: 26  MIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRSDIGTL 85
           +I  G V  + P++A  AI     +LLDVRP+ E++KA V GS  +P+F  D  +   TL
Sbjct: 45  LIESGTVRPILPKDASTAINSEGFVLLDVRPTWEREKARVAGSLHVPMFVEDTDNSPITL 104

Query: 86  SKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFP-KDTDLIVACQRGLRSLAACELLYNA 144
            KK+ +F   G W+G    T +++FLS+VE   P K+  L+VAC  GLRS+ A   LYN 
Sbjct: 105 LKKWVHFGYIGLWTGQYLTTLNSEFLSQVENAIPGKEAKLLVACGEGLRSMTAASKLYNG 164

Query: 145 GYRNLFWVQGGLEAAEEEDL-VIEGPQPLKFAGIGGVS 181
           GY+NL W+ GG   ++  D   +EG + L+ A +GGVS
Sbjct: 165 GYKNLGWLAGGFNRSKNNDFPAVEGKEKLQHATVGGVS 202


>Glyma04g36390.1 
          Length = 80

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 53/57 (92%)

Query: 106 YDNQFLSKVEEKFPKDTDLIVACQRGLRSLAACELLYNAGYRNLFWVQGGLEAAEEE 162
           ++NQFL KVEEKFPKD +LIVACQ+GLRSLAACELLYNAGY+NLFWVQGG EAAE E
Sbjct: 8   FNNQFLDKVEEKFPKDAELIVACQKGLRSLAACELLYNAGYKNLFWVQGGYEAAEGE 64


>Glyma19g32770.1 
          Length = 246

 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 1/165 (0%)

Query: 21  RRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRS 80
           RR  ++I+  +V  +   +A   ++     +LDVR   +  +A +K  + +P+F  +  +
Sbjct: 49  RRRLSLIK-AEVKYVNAEKAKELVEADGYTVLDVRDKTQFVRAHIKSCSHVPLFVENKDN 107

Query: 81  DIGTLSKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFPKDTDLIVACQRGLRSLAACEL 140
           D GT+ K+  +    G + G+P    + +F+  V+ +FP ++ L+V CQ GLRS AA   
Sbjct: 108 DPGTIIKRQLHNNFSGLFFGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASK 167

Query: 141 LYNAGYRNLFWVQGGLEAAEEEDLVIEGPQPLKFAGIGGVSEFLG 185
           L  AG+ N+  +  GL+  +       G   L+ AG  G+    G
Sbjct: 168 LEEAGFENIACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQG 212


>Glyma19g32770.2 
          Length = 190

 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 21  RRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRS 80
           RR  ++I+  +V  +   +A   ++     +LDVR   +  +A +K  + +P+F  +  +
Sbjct: 49  RRRLSLIK-AEVKYVNAEKAKELVEADGYTVLDVRDKTQFVRAHIKSCSHVPLFVENKDN 107

Query: 81  DIGTLSKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFPKDTDLIVACQRGLRSLAACEL 140
           D GT+ K+  +    G + G+P    + +F+  V+ +FP ++ L+V CQ GLRS AA   
Sbjct: 108 DPGTIIKRQLHNNFSGLFFGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASK 167

Query: 141 LYNAGYRNLFWVQGGLEA 158
           L  AG+ N+  +  GL+ 
Sbjct: 168 LEEAGFENIACITSGLQT 185


>Glyma03g29870.1 
          Length = 239

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 1/165 (0%)

Query: 21  RRWDAMIREGKVNVLTPREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRS 80
           RR  A+I+  +V  +   +A   ++     +LDVR   + ++A +K  + +P+F  +  +
Sbjct: 42  RRRMALIK-AEVKYVNAEKAKELVEADGYTVLDVRDKNQFERAHIKSCSHVPLFVENKDN 100

Query: 81  DIGTLSKKFTNFMMGGWWSGVPTLTYDNQFLSKVEEKFPKDTDLIVACQRGLRSLAACEL 140
           D GT+ K+  +    G + G+P    + +F+  V+ +FP ++ L+V CQ GLRS AA   
Sbjct: 101 DPGTIIKRQLHNNFSGLFYGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASK 160

Query: 141 LYNAGYRNLFWVQGGLEAAEEEDLVIEGPQPLKFAGIGGVSEFLG 185
           L  AG+ N+  +  GL+  +       G   L+ AG  G+    G
Sbjct: 161 LEAAGFENIACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQG 205


>Glyma03g07830.1 
          Length = 85

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%)

Query: 37  PREAGYAIQLSSKILLDVRPSVEQKKAWVKGSTWIPIFEVDDRSDIGTLSKKFTNFMMGG 96
           P++A   I     +LLD+RP+ E++KA V GS  +P+F  D  +   TL KK+ +F   G
Sbjct: 1   PKDASTTINSEGFVLLDIRPTWEREKARVAGSLHVPMFVEDTDNSPITLLKKWVHFGYIG 60

Query: 97  WWSGVPTLTYDNQFLSKVEEKFP 119
            W+G    T +++FL +VE   P
Sbjct: 61  LWTGQYLTTLNSEFLIQVENSIP 83