Jatropha Genome Database

JcCA0311501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311501.10 - phase: 0 /partial
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16200.1                                                       285   2e-77
Glyma19g43380.1                                                       276   1e-74
Glyma09g41810.1                                                       267   6e-72
Glyma02g04960.1                                                       254   6e-68
Glyma07g18670.1                                                       229   2e-60
Glyma18g43540.1                                                       227   9e-60
Glyma05g33010.1                                                       199   2e-51
Glyma01g30920.1                                                       122   2e-28
Glyma20g00680.1                                                        99   5e-21
Glyma19g27150.1                                                        76   2e-14
Glyma10g03600.1                                                        67   1e-11
Glyma03g40700.1                                                        63   2e-10

>Glyma02g16200.1 
          Length = 431

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/186 (75%), Positives = 160/186 (86%), Gaps = 7/186 (3%)

Query: 16  ASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCW 75
           A PEWMN+ DN WQLT+ATLVGLQSVPGLVILYGSIVKKKWA+NSAFMALYAFAAVLVCW
Sbjct: 2   ACPEWMNRGDNTWQLTSATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCW 61

Query: 76  VGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFVFAAITLILVA 135
           VGW Y+MSFG  +  PFLG+P  +LD++F+  + FAG+FP+ATMVYFQ VFAAITLIL+A
Sbjct: 62  VGWCYKMSFGE-RILPFLGQPNTALDREFVFRKTFAGEFPNATMVYFQLVFAAITLILIA 120

Query: 136 GALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGYVIHLASG--- 192
           GALLGRMNF+AWMLFVPLW+TFSYTI A+SIW   GWL KMG+IDYSGG+VIHL+SG   
Sbjct: 121 GALLGRMNFYAWMLFVPLWVTFSYTICAFSIWSTDGWLFKMGLIDYSGGFVIHLSSGVAG 180

Query: 193 ---GCW 195
               CW
Sbjct: 181 FVAACW 186


>Glyma19g43380.1 
          Length = 441

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 154/172 (89%), Gaps = 1/172 (0%)

Query: 21  MNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCWVGWGY 80
           MNK DNAWQL AAT+VGLQS+PGLVILYGS+VKK WA+NSAFMA YAFA VL+CWVGWG+
Sbjct: 1   MNKGDNAWQLMAATVVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAGVLLCWVGWGF 60

Query: 81  QMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFVFAAITLILVAGALLG 140
           +MSFG  K   FLGKPGV++D+KFLL + F G FP+ATMV+FQ VFA ITLIL+AGALLG
Sbjct: 61  RMSFGE-KMVFFLGKPGVAVDEKFLLGKAFLGLFPNATMVFFQGVFAGITLILIAGALLG 119

Query: 141 RMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGYVIHLASG 192
           RMNF AWMLFVPLWLTFSYT+TA+SIWCP GWLAK+G+ID+SGGYVIHL++G
Sbjct: 120 RMNFRAWMLFVPLWLTFSYTVTAFSIWCPDGWLAKLGVIDFSGGYVIHLSAG 171


>Glyma09g41810.1 
          Length = 457

 Score =  267 bits (682), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 131/175 (74%), Positives = 150/175 (85%), Gaps = 1/175 (0%)

Query: 18  PEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCWVG 77
           PEW ++ADNAWQL AATLVGLQSVPGL+ILYG  VKKKWAVNSAFM+LYAFA V  CWV 
Sbjct: 1   PEWFSRADNAWQLIAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVV 60

Query: 78  WGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFVFAAITLILVAGA 137
           WGY+MSFG+ +  PF GKP +SL+  +L  + F G FP+ATMVYFQ VFAAITLIL+AGA
Sbjct: 61  WGYRMSFGD-ELLPFWGKPAMSLEHTYLFKRAFLGAFPNATMVYFQCVFAAITLILIAGA 119

Query: 138 LLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGYVIHLASG 192
           +LGRMNF+AWMLFVPLWLTFSYT TA+SIW  +G+L KMGIIDYSGGYVIHL+SG
Sbjct: 120 VLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSSSGFLTKMGIIDYSGGYVIHLSSG 174


>Glyma02g04960.1 
          Length = 453

 Score =  254 bits (648), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 132/204 (64%), Positives = 162/204 (79%), Gaps = 4/204 (1%)

Query: 7   LPSGLMHDDASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALY 66
           LPS L+  +ASPEW NKADNAWQLTAATLVGLQSVPGLVILYGS+VK+KWAVNSAFMALY
Sbjct: 8   LPSSLLPSEASPEWNNKADNAWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALY 67

Query: 67  AFAAVLVCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFVF 126
           AFA VL+CWV W ++M+FG  +  PF+G P  +L +KFLL +   G FP A  V++QF F
Sbjct: 68  AFACVLICWVSWAHRMAFG-ARLLPFVGAPNHALAEKFLLAKSTIGYFPMADFVFYQFAF 126

Query: 127 AAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGYV 186
           AAITL+L+AG+LLGRMNF+AWM+FVPLWLT SYT+ A+SIW   G+L +  IIDY+GG+V
Sbjct: 127 AAITLVLLAGSLLGRMNFYAWMMFVPLWLTLSYTVGAFSIWDDDGFL-QGKIIDYAGGFV 185

Query: 187 IHLASG-GCWFHC-SLLGKTITVI 208
           IHL+SG G    C S+ G  I ++
Sbjct: 186 IHLSSGVGGGHSCLSITGYNIEIV 209


>Glyma07g18670.1 
          Length = 486

 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/198 (62%), Positives = 146/198 (73%), Gaps = 20/198 (10%)

Query: 13  HDDASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVL 72
           H  A+PEW+NK DNAWQLTAATLVGLQS+PGLVILY SIVKKKWAVNSAFMALYAFAAVL
Sbjct: 10  HLPAAPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVL 69

Query: 73  VCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGK------------------F 114
           +CWV   Y+M+FG   F PF GK   +L QKFL  +    +                  +
Sbjct: 70  ICWVLVCYRMAFGEELF-PFWGKGAPALGQKFLTKRAIVIETIHHFDNGTVESPPEEPFY 128

Query: 115 PSATMVYFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLA 174
           P A++VYFQF FAAITLIL+AG++LGRMN  AWM FVPLWL FSYT+ A+S+W   G+L 
Sbjct: 129 PMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWG-GGFLY 187

Query: 175 KMGIIDYSGGYVIHLASG 192
           + G+IDYSGGYVIHL+SG
Sbjct: 188 QWGVIDYSGGYVIHLSSG 205


>Glyma18g43540.1 
          Length = 486

 Score =  227 bits (578), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 122/198 (61%), Positives = 145/198 (73%), Gaps = 20/198 (10%)

Query: 13  HDDASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVL 72
           H  A+P W+NK DNAWQLTAATLVGLQS+PGLVILY SIVKKKWAVNSAFMALYAFAAVL
Sbjct: 10  HLPAAPSWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVL 69

Query: 73  VCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGK------------------F 114
           +CWV   Y+M+FG  +  PF GK   +L QKFL  +    +                  +
Sbjct: 70  ICWVLVCYRMAFG-EELLPFWGKGAPALGQKFLTKRAVVNETIHHFHNGTVESPPEEPFY 128

Query: 115 PSATMVYFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLA 174
           P A++VYFQF FAAITLIL+AG++LGRMN  AWM FVPLWL FSYT+ A+S+W   G+L 
Sbjct: 129 PMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWG-GGFLY 187

Query: 175 KMGIIDYSGGYVIHLASG 192
           + G+IDYSGGYVIHL+SG
Sbjct: 188 QWGVIDYSGGYVIHLSSG 205


>Glyma05g33010.1 
          Length = 453

 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 21/182 (11%)

Query: 30  LTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCWVGWGYQMSFGNNKF 89
           + +ATLVG+QS+PGLVILYGSIVKKKWAVNSAFMALYAFAAV++CWV W Y+MSFG  + 
Sbjct: 1   MVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVAWAYKMSFG-EEL 59

Query: 90  APFLGKPGVSLDQKFLLDQG-------------------FAGKFPSATMVYFQFVFAAIT 130
            PF GK G +L Q+FL+ Q                        +P  TMV+FQ VFAAI 
Sbjct: 60  LPFWGKAGPALGQRFLIKQAGLPATPHYFRNGGGLETAEITPFYPMGTMVWFQCVFAAIA 119

Query: 131 LILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGYVIHLA 190
           ++++AG++L RMNF AWM+FVPLWLTFSYTI A+S+W   G+L   G++DYSGGYVIHL+
Sbjct: 120 VVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWG-GGFLFHWGVMDYSGGYVIHLS 178

Query: 191 SG 192
           SG
Sbjct: 179 SG 180


>Glyma01g30920.1 
          Length = 419

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 20/138 (14%)

Query: 73  VCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGK------------------F 114
           +CWV   ++M+FG+ K  PF GK   +L QKFL  +    +                  F
Sbjct: 1   ICWVLVCHRMAFGD-KLLPFWGKGAPALGQKFLTHRAKVPESTHYYNNGTVESATSEPLF 59

Query: 115 PSATMVYFQFVFAAITLILVAGALLGRMNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLA 174
            +A++VYFQF FAAITLIL+AG++LGRMN  AWM FVPLWL FSYT+ A+S+W   G+L 
Sbjct: 60  ATASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWG-GGFLY 118

Query: 175 KMGIIDYSGGYVIHLASG 192
             G+IDYSGGYVIHL+SG
Sbjct: 119 HWGVIDYSGGYVIHLSSG 136


>Glyma20g00680.1 
          Length = 317

 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 81/132 (61%), Gaps = 12/132 (9%)

Query: 18  PEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCWVG 77
           PEW ++ADNAW+L AATLVG  S         ++V+  W+     M       V +C+  
Sbjct: 1   PEWFSRADNAWKLIAATLVGNPSWSAKCSRAHNLVR--WSSEEE-MGSELSIHVTLCF-- 55

Query: 78  WGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFAGKFPSATMVYFQFVFAAITLILVAGA 137
             Y MSFG+ +  PF GKP +SL+  +L  + F G FP+ATM     VFAAITLIL+AGA
Sbjct: 56  --YIMSFGD-ELLPFWGKPAMSLEHAYLFKKAFLGAFPNATMC----VFAAITLILIAGA 108

Query: 138 LLGRMNFHAWML 149
           +LG MNF+AWML
Sbjct: 109 VLGHMNFYAWML 120


>Glyma19g27150.1 
          Length = 250

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 44/51 (86%), Gaps = 5/51 (9%)

Query: 142 MNFHAWMLFVPLWLTFSYTITAYSIWCPTGWLAKMGIIDYSGGYVIHLASG 192
           +NF AWMLFVPLWLTFSYT+TA+SI     WLAK G+ID+SGGYVIHL++G
Sbjct: 44  LNFGAWMLFVPLWLTFSYTVTAFSI-----WLAKPGVIDFSGGYVIHLSAG 89


>Glyma10g03600.1 
          Length = 393

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/35 (88%), Positives = 33/35 (94%)

Query: 21 MNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKK 55
          MN+ DN WQLT+ATLVGLQSVPGLVILYGSIVKKK
Sbjct: 1  MNRGDNTWQLTSATLVGLQSVPGLVILYGSIVKKK 35


>Glyma03g40700.1 
          Length = 213

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 56/119 (47%), Gaps = 28/119 (23%)

Query: 52  VKKKWAVNSAFMALYAFAAVLVCWVGWGYQMSFGNNKFAPFLGKPGVSLDQKFLLDQGFA 111
           VKK WA+N       +         G G Q                +  +   LL + F 
Sbjct: 20  VKKTWAINYRLRGRSSLQG------GVGIQHV--------------IRRENGVLLGKAFL 59

Query: 112 GKFPSATMVYFQFVFAAITLILVAGALLGRMNFHAW--------MLFVPLWLTFSYTIT 162
           G FP+ATMV+FQ +FA ITLIL+AGALLGRMNF A         +LF  L L F Y  T
Sbjct: 60  GFFPTATMVFFQGLFAGITLILIAGALLGRMNFRACRCCLCRFGLLFPTLSLPFYYQTT 118