Jatropha Genome Database

JcCA0311291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311291.10 + phase: 0 /partial
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g39370.1                                                       259   1e-69
Glyma18g19360.1                                                       247   6e-66
Glyma13g21030.1                                                       240   5e-64
Glyma06g19320.1                                                       238   2e-63
Glyma1129s00200.1                                                     238   3e-63
Glyma17g09700.1                                                       224   4e-59
Glyma05g02230.1                                                        91   6e-19

>Glyma08g39370.1 
          Length = 413

 Score =  259 bits (662), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 131/177 (74%), Positives = 149/177 (84%), Gaps = 2/177 (1%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           NNR +DMLVGDIYGG DYSKIGLSST IASSFGKAISDNKE  DYKPED+ARSLLRMISN
Sbjct: 237 NNRAVDMLVGDIYGGMDYSKIGLSSTAIASSFGKAISDNKERGDYKPEDIARSLLRMISN 296

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQISYLNALRFGLKRIFFGGFFI+ HP+TMDT+SVAV+FWSKGEAKAMFLRHEGFLG 
Sbjct: 297 NIGQISYLNALRFGLKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGG 356

Query: 121 LGAFMSYAKHSLDDSVVNQSMQ-SLVNGSYASD-TNYNPQNGDWSDNESIPCSLYTA 175
           +GAFMS  KH L + + NQ +Q S    S+A D T +   +G+++ +ESI CS+Y A
Sbjct: 357 VGAFMSSDKHGLKELLANQVVQRSPSKLSFAVDKTLHGSPDGEFNGDESIECSVYAA 413


>Glyma18g19360.1 
          Length = 417

 Score =  247 bits (630), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 124/170 (72%), Positives = 144/170 (84%), Gaps = 2/170 (1%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           NNR +DMLVGDIYGG DYSKIGLSST IASSFGKAISDNKE +DYKPED+ARSLLRMISN
Sbjct: 237 NNRAVDMLVGDIYGGMDYSKIGLSSTAIASSFGKAISDNKEREDYKPEDIARSLLRMISN 296

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQISYLNALRFG+KRIFFGGFFI+ HP+TMDT+SVAV+FWSKGEAKAMFLRHEGFLG 
Sbjct: 297 NIGQISYLNALRFGMKRIFFGGFFIRRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGG 356

Query: 121 LGAFMSYAKHSLDDSVVNQSMQ-SLVNGSYASDTN-YNPQNGDWSDNESI 168
           +GAFMS  KH L + + +Q +Q SL   S+A D   +   +GD++ +E +
Sbjct: 357 VGAFMSSDKHGLKELLAHQVVQRSLSKLSFAVDKILHGSPDGDFNGDEIV 406


>Glyma13g21030.1 
          Length = 940

 Score =  240 bits (613), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 117/171 (68%), Positives = 137/171 (80%), Gaps = 3/171 (1%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           +NR +DMLVGDIYGG DYSKIGLS++TIASSFGK IS+ KE+++Y+PED++ SLLRMIS 
Sbjct: 290 DNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISY 349

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQI+YLNALRF LKRIFFGGFFI+GH YTMDTIS AVHFWS GEA+AMFLRHEGFLG 
Sbjct: 350 NIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGA 409

Query: 121 LGAFMSYAKHSLDDSVVNQSMQSLVNGS-YASDTNYNPQNGDWSDNESIPC 170
           LGAFMSY KH LDD +V+Q ++    G+ Y     + P  GD   NE   C
Sbjct: 410 LGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDL--NEKAKC 458


>Glyma06g19320.1 
          Length = 779

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/166 (68%), Positives = 136/166 (81%), Gaps = 1/166 (0%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           +NR +DMLVGDIYGG DYSKIGLS++TIASSFGK IS+ KE+++Y+PED++ SLLRMIS 
Sbjct: 194 DNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISY 253

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQI+YLNALRF LKRIFFGGFFI+GH YTMDTIS AVHFWS GEA+AMFLRHEGFLG 
Sbjct: 254 NIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGA 313

Query: 121 LGAFMSYAKHSLDDSVVNQSMQSLVNGS-YASDTNYNPQNGDWSDN 165
           LGAFMSY KH LDD +V+Q ++    G+ Y     + P  GD ++ 
Sbjct: 314 LGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK 359


>Glyma1129s00200.1 
          Length = 367

 Score =  238 bits (607), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 138/169 (81%), Gaps = 1/169 (0%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           +NR +DMLVGDIYGG DYSKIGLS++TIASSFGK IS+ KE+++Y+PED++ SLLRMIS 
Sbjct: 44  DNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISY 103

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQI+YLNALRF LKRIFFGGFFI+GH YTMDTIS AVHFWS GEA+AMFLRHEGFLG 
Sbjct: 104 NIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGA 163

Query: 121 LGAFMSYAKHSLDDSVVNQSMQSLVNGS-YASDTNYNPQNGDWSDNESI 168
           LGAFMSY KH LDD +V+Q ++    G+ Y     + P  GD ++  ++
Sbjct: 164 LGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKANV 212


>Glyma17g09700.1 
          Length = 910

 Score =  224 bits (571), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 112/169 (66%), Positives = 131/169 (77%), Gaps = 3/169 (1%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           +N   DMLVGDIYGG DYSKIGLS++TIASSFGKA S+ K ++DY+PED++ SLLRMIS 
Sbjct: 308 DNSNTDMLVGDIYGGMDYSKIGLSASTIASSFGKATSEKKGLEDYRPEDISLSLLRMISY 367

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NI QI+YLNALRFGLKRIFFGGFFI+GH YTMD IS A+HFWS G A+AMFLRHEGFLG 
Sbjct: 368 NIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQAMFLRHEGFLGA 427

Query: 121 LGAFMSYAKHSLDDSVVNQSMQSLVNGS-YASDTNYNPQNGDWSDNESI 168
           LGAFMSY KH LDD +V+Q ++    G+ Y     + P   D   NE I
Sbjct: 428 LGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLRDL--NEKI 474


>Glyma05g02230.1 
          Length = 323

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           +N   DMLVGDIYGG DYSK GLS++TIASSFGK  S+ K +DDY+PED++ SLLRMIS 
Sbjct: 260 DNSNTDMLVGDIYGGMDYSKTGLSASTIASSFGKVTSEKKGLDDYRPEDISLSLLRMISY 319

Query: 61  NIGQ 64
           NI Q
Sbjct: 320 NIAQ 323