Jatropha Genome Database

JcCA0311061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311061.10 + phase: 0 
         (526 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g01720.2                                                       475   e-134
Glyma12g01720.1                                                       380   e-105

>Glyma12g01720.2 
          Length = 552

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/539 (46%), Positives = 334/539 (61%), Gaps = 25/539 (4%)

Query: 7   ATATDSPHLLAPDVTESNLQPFFVLHEGSSHXXXXXXXXXXXXXXXIDLSPTLTKNGENT 66
           + A  +P     +V E++ QPFFVLH+ SS                 +LS +  +  +  
Sbjct: 6   SVADSTPPSTTSEVVENDFQPFFVLHKASSRRKDRKPTAQGKLWKRNELSSSFPQGAKKL 65

Query: 67  ETEKVEDSDDHQYLAKRMEAFEAVWSKIESTIKAVLRNLNASSFNEIHQWVCESFKTLTS 126
                E+ D H +   ++EAF+ VW+KIESTIK VLR+LNA  FN+I +WV E F     
Sbjct: 66  GGRMTEECDHHLFQQLQIEAFDIVWAKIESTIKDVLRDLNAIVFNDIQKWVLECFNATKL 125

Query: 127 FGTPSFHEATRPFPLVQGVISKQVFTGVVLTK-------------------NMEFVDDLL 167
            G P+  EATR FP +      Q+FT  V T                    N+EFVDD+L
Sbjct: 126 LGEPTIAEATRSFPTLNNTTPGQMFTAFVSTSKCVHISGKYPECFDSWKLGNIEFVDDIL 185

Query: 168 TFEELGLHLKSKGCHVANLSSLDFSVKNGIGGCLRSLLRQLVMVTLDAPDISILATWYRE 227
           TFEELG  LKS GCHVA LSSL+FS KNGI GCL++LL++ +   +D+ DISILA+WYRE
Sbjct: 186 TFEELGHFLKSHGCHVAKLSSLEFSSKNGIAGCLKALLQEFLGCAIDSADISILASWYRE 245

Query: 228 QGNCNNPIVVIIDDLERCCGSVLSDFILMLSEWILKIPVILIMGVATTLDALRNILPSNM 287
           Q N N P+++I++DLERCCGSVL+DFILMLSEW++K+P+I I GVATT+DA RNILPS+ 
Sbjct: 246 QVNYNKPLLLIVNDLERCCGSVLTDFILMLSEWVVKVPIIFIFGVATTVDASRNILPSHA 305

Query: 288 IHHLCPCNFILRTPSERMDAIVEAVLVKQCSGFCISHKVAVFLRSYFVCQDGTITSFIKA 347
           +  LCP  F+L TP ERMDAIVEAVL+K C+ F I +KVAVFLR+YF+ QDGT+TSFI+A
Sbjct: 306 LERLCPSRFMLGTPVERMDAIVEAVLLKHCTTFSIGYKVAVFLRNYFINQDGTVTSFIRA 365

Query: 348 LKIACAQHFSMESLSFILPWFXXXXXXXXXXXXNYGLSPEIVLKRAFDLPSCRRNKMAEQ 407
           LK+AC  HFSME LS I                   LSPE +LK   +LP C RN+  + 
Sbjct: 366 LKVACLLHFSMEPLSVI----HGQTLAEDQKEGKSALSPETLLKYIDELPLCARNQTVDH 421

Query: 408 -NGDILVHGLSELKKLQKQWSTIVMCLYEVVXXXXXXXXXXXXEALDPELGMLRVSDTHR 466
                +  GLSEL  +QK WST V+CLYE              EAL  +L + RVSD H 
Sbjct: 422 PTQKSMSEGLSELVTVQKLWSTAVLCLYEAGKYSRVRLLDLFCEALSQDLYLSRVSDCHV 481

Query: 467 GLQEDSIVFPTEQDLQKKYTSLRRGGIISQAMHKVRDLPAMQLWKLLKGWEKHTIDIPQ 525
           G ++D  +  T  D +++Y+ ++ GGII + + KVRD+P   L++L++ WEK T D+ +
Sbjct: 482 GDEKDRDLSST-NDPRQQYSIMKSGGIIGKIVCKVRDIPTGMLYQLIESWEKLTADVSE 539


>Glyma12g01720.1 
          Length = 693

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/292 (61%), Positives = 226/292 (77%)

Query: 72  EDSDDHQYLAKRMEAFEAVWSKIESTIKAVLRNLNASSFNEIHQWVCESFKTLTSFGTPS 131
           E+ D H +   ++EAF+ VW+KIESTIK VLR+LNA  FN+I +WV E F      G P+
Sbjct: 3   EECDHHLFQQLQIEAFDIVWAKIESTIKDVLRDLNAIVFNDIQKWVLECFNATKLLGEPT 62

Query: 132 FHEATRPFPLVQGVISKQVFTGVVLTKNMEFVDDLLTFEELGLHLKSKGCHVANLSSLDF 191
             EATR FP +      Q+FT  V T+N+EFVDD+LTFEELG  LKS GCHVA LSSL+F
Sbjct: 63  IAEATRSFPTLNNTTPGQMFTAFVSTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEF 122

Query: 192 SVKNGIGGCLRSLLRQLVMVTLDAPDISILATWYREQGNCNNPIVVIIDDLERCCGSVLS 251
           S KNGI GCL++LL++ +   +D+ DISILA+WYREQ N N P+++I++DLERCCGSVL+
Sbjct: 123 SSKNGIAGCLKALLQEFLGCAIDSADISILASWYREQVNYNKPLLLIVNDLERCCGSVLT 182

Query: 252 DFILMLSEWILKIPVILIMGVATTLDALRNILPSNMIHHLCPCNFILRTPSERMDAIVEA 311
           DFILMLSEW++K+P+I I GVATT+DA RNILPS+ +  LCP  F+L TP ERMDAIVEA
Sbjct: 183 DFILMLSEWVVKVPIIFIFGVATTVDASRNILPSHALERLCPSRFMLGTPVERMDAIVEA 242

Query: 312 VLVKQCSGFCISHKVAVFLRSYFVCQDGTITSFIKALKIACAQHFSMESLSF 363
           VL+K C+ F I +KVAVFLR+YF+ QDGT+TSFI+ALK+AC  HFSME L F
Sbjct: 243 VLLKHCTTFSIGYKVAVFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLMF 294