Jatropha Genome Database

JcCA0310961.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310961.20 + phase: 0 /partial
         (70 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g10240.1                                                        87   3e-18
Glyma08g10230.1                                                        87   4e-18
Glyma15g40140.1                                                        86   1e-17
Glyma08g18750.3                                                        86   1e-17
Glyma08g18750.1                                                        86   1e-17
Glyma08g18750.2                                                        85   2e-17
Glyma08g10290.1                                                        85   2e-17
Glyma08g10250.2                                                        85   2e-17
Glyma08g10250.1                                                        85   2e-17
Glyma05g27300.1                                                        85   2e-17
Glyma08g10280.1                                                        67   4e-12
Glyma06g36660.1                                                        62   1e-10
Glyma05g27290.1                                                        60   4e-10

>Glyma08g10240.1 
          Length = 92

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 7  NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTT 66
          NV E++ +AK+ LPKM YD+YA GAEDQ TLKEN  AF R  +F LRILVD+S+ID++TT
Sbjct: 8  NVTEYEAIAKENLPKMVYDFYASGAEDQWTLKENRNAFSR-ILFRLRILVDLSKIDLTTT 66

Query: 67 VLGY 70
          VLG+
Sbjct: 67 VLGF 70


>Glyma08g10230.1 
          Length = 407

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 7   NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTT 66
           NVNE++ +AK+ LPKM YDYYA GAEDQ TLKEN  AF R  +F  RILVDVS+ID++ T
Sbjct: 45  NVNEYEAIAKEKLPKMVYDYYASGAEDQWTLKENQNAFSRI-LFRPRILVDVSKIDLTAT 103

Query: 67  VLGY 70
           VLG+
Sbjct: 104 VLGF 107


>Glyma15g40140.1 
          Length = 371

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)

Query: 4  EPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDM 63
          E  NV+E++ +AKQ LPKM +DYYA GAEDQ TL+EN  AF R  +F  RIL+DVS+ID+
Sbjct: 2  EITNVSEYEAIAKQKLPKMAFDYYASGAEDQWTLQENRNAFSRI-LFRPRILIDVSKIDL 60

Query: 64 STTVLGY 70
          +TTVLG+
Sbjct: 61 TTTVLGF 67


>Glyma08g18750.3 
          Length = 371

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)

Query: 4  EPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDM 63
          E  NV+E++ +AKQ LPKM +DYYA GAEDQ TL+EN  AF R  +F  RIL+DVS+ID+
Sbjct: 2  EITNVSEYEAIAKQKLPKMVFDYYASGAEDQWTLQENRNAFSRI-LFRPRILIDVSKIDI 60

Query: 64 STTVLGY 70
          +TTVLG+
Sbjct: 61 TTTVLGF 67


>Glyma08g18750.1 
          Length = 371

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)

Query: 4  EPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDM 63
          E  NV+E++ +AKQ LPKM +DYYA GAEDQ TL+EN  AF R  +F  RIL+DVS+ID+
Sbjct: 2  EITNVSEYEAIAKQKLPKMVFDYYASGAEDQWTLQENRNAFSRI-LFRPRILIDVSKIDI 60

Query: 64 STTVLGY 70
          +TTVLG+
Sbjct: 61 TTTVLGF 67


>Glyma08g18750.2 
          Length = 297

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)

Query: 4  EPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDM 63
          E  NV+E++ +AKQ LPKM +DYYA GAEDQ TL+EN  AF R  +F  RIL+DVS+ID+
Sbjct: 2  EITNVSEYEAIAKQKLPKMVFDYYASGAEDQWTLQENRNAFSR-ILFRPRILIDVSKIDI 60

Query: 64 STTVLGY 70
          +TTVLG+
Sbjct: 61 TTTVLGF 67


>Glyma08g10290.1 
          Length = 370

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 7  NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTT 66
          NV E++ +AK+ LPKM YDYYA GAEDQ TLKEN  AF R  +F  RILVDVS+ID++ T
Sbjct: 8  NVTEYEAIAKEKLPKMVYDYYASGAEDQWTLKENRNAFSRI-LFRPRILVDVSKIDLTAT 66

Query: 67 VLGY 70
          VLG+
Sbjct: 67 VLGF 70


>Glyma08g10250.2 
          Length = 370

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 7  NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTT 66
          NV E++ +AK+ LPKM YDYYA GAEDQ TLKEN  AF R  +F  RILVDVS+ID++ T
Sbjct: 8  NVTEYEAIAKEKLPKMVYDYYASGAEDQWTLKENRNAFSRI-LFRPRILVDVSKIDLTAT 66

Query: 67 VLGY 70
          VLG+
Sbjct: 67 VLGF 70


>Glyma08g10250.1 
          Length = 370

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 7  NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTT 66
          NV E++ +AK+ LPKM YDYYA GAEDQ TLKEN  AF R  +F  RILVDVS+ID++ T
Sbjct: 8  NVTEYEAIAKEKLPKMVYDYYASGAEDQWTLKENRNAFSRI-LFRPRILVDVSKIDLTAT 66

Query: 67 VLGY 70
          VLG+
Sbjct: 67 VLGF 70


>Glyma05g27300.1 
          Length = 368

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 7  NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTT 66
          NV E++ +AK+ LPKM YDYYA GAEDQ TL EN  AF R  +F  RILVDVS+ID++TT
Sbjct: 6  NVTEYEAIAKEKLPKMVYDYYASGAEDQWTLNENRNAFSRI-LFRPRILVDVSKIDLTTT 64

Query: 67 VLGY 70
          VLG+
Sbjct: 65 VLGF 68


>Glyma08g10280.1 
          Length = 256

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 1/49 (2%)

Query: 22 MYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDMSTTVLGY 70
          M YD+YA GAEDQ TLKEN  AF R  +F LRILVD+S+ID++TTVLG+
Sbjct: 1  MVYDFYASGAEDQWTLKENRNAFSR-ILFRLRILVDLSKIDLTTTVLGF 48


>Glyma06g36660.1 
          Length = 64

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 3/65 (4%)

Query: 4  EPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDM 63
          E  NV+E++ + KQ LPKM +DYY    EDQ  ++EN   F +N      IL+DVS+ID 
Sbjct: 2  EITNVSEYKSIVKQQLPKMMFDYYVACVEDQWIMEENKNVFFQNFP---HILIDVSKIDT 58

Query: 64 STTVL 68
          +TTVL
Sbjct: 59 TTTVL 63


>Glyma05g27290.1 
          Length = 403

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/40 (65%), Positives = 31/40 (77%)

Query: 7  NVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCR 46
          NV E++ +AK+ LPKM YD+YA GAEDQ TLKEN  AF R
Sbjct: 4  NVTEYEAIAKEKLPKMVYDFYASGAEDQWTLKENRNAFSR 43