Jatropha Genome Database
- JcCA0310951.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0310951.10 - phase: 0
(108 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g32880.1 74 4e-14
Glyma09g00270.1 62 9e-11
Glyma01g16600.1 61 3e-10
Glyma03g01970.1 58 2e-09
Glyma18g38660.1 52 1e-07
Glyma05g22280.1 52 2e-07
Glyma20g39450.2 51 2e-07
Glyma18g08460.1 46 7e-06
Glyma04g26800.1 46 8e-06
>Glyma11g32880.1
Length = 261
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 2 GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTGY 61
GL++ Y+ ++QIL++D PS++KV+++I+ Q+E H +L +L T V+ + +
Sbjct: 117 GLNDPYNQARSQILMLDPLPSLDKVFSIII----QQERHMNLAILPTPTAVLAVQSAPSF 172
Query: 62 RRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYPK 107
S G+ ++ + R+C HC HT DTCF HGYP
Sbjct: 173 TTASPGRGRGYSKQGQ-----SRHCTHCGRNNHTVDTCFAKHGYPP 213
>Glyma09g00270.1
Length = 791
Score = 62.4 bits (150), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 1 MGLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQRE-VHHSLIVLSETTVVILARGGT 59
MGL++ + V+ QILL D P + V++++L+ QRE V + L L+ T+ T
Sbjct: 158 MGLNDNFAQVQGQILLYDPLPPIGNVFSLVLQEKAQREIVVNHLPSLNSNTMAFTVNSTT 217
Query: 60 GYRRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
P K +KE C H GHTKD C+KL GYP
Sbjct: 218 K---------NPTNGKSRNAKKERPQCAHSNLLGHTKDKCYKLVGYP 255
>Glyma01g16600.1
Length = 2962
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 1 MGLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTG 60
+GL+ YD V+ QIL ++ P +N+V +I +RE+ L + T ++A GGT
Sbjct: 181 VGLNSEYDQVRIQILGKEKVPGLNEVIVIIRSDESRREL--MLETPTAETSTMIAEGGTT 238
Query: 61 YRRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
N K+G P KK E+ + +C HT++ C+KLHG P
Sbjct: 239 MVVNQKKNGFPNMEKKH----EEGWYTYCNKPRHTREKCWKLHGKP 280
>Glyma03g01970.1
Length = 491
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 2 GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVL------SETTVVILA 55
GL Y+DHV +QIL ++ PS++ + T +L V +S+I +ET ++ +
Sbjct: 119 GLYSYFDHVHDQILAGEQVPSMDSLVTRVLGVPTLVRGENSVIAFETSAAPTETLAMVAS 178
Query: 56 R--GGTGYRR-NSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
R GG G + +S + G P C +CK GH ++ C+ LHGYP
Sbjct: 179 RERGGRGNKGGHSSRGGHPQ-------------CTYCKKPGHIQEKCYTLHGYP 219
>Glyma18g38660.1
Length = 1634
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 24/110 (21%)
Query: 2 GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILA-----R 56
GL++ ++ VK+QILL++ PS+ K+++M+++ +Q V + L ++ ++ A +
Sbjct: 198 GLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQNCVPN----LDDSKALVNASTSKSQ 253
Query: 57 GGTGYRRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
G R NS RYC +C H + CF+ HG P
Sbjct: 254 GSANGRSNS---------------GSKRYCTYCHKTNHFVENCFQKHGVP 288
>Glyma05g22280.1
Length = 227
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 2 GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTGY 61
GL + D + ++IL P+V VY + A ++E ++ SE+T+ GT
Sbjct: 112 GLDSHLDAIHSRILATTPLPNVQPVYATVYVEANRQEA----MLDSESTM------GTA- 160
Query: 62 RRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYPKW 108
F K++ +K C HC H DTCFKLHGY W
Sbjct: 161 -----------FAVKKYSKKGIHNCTHCNGDNHVVDTCFKLHGYLDW 196
>Glyma20g39450.2
Length = 2005
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 2 GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQR----------EVHHSLIVLSETTV 51
GL+E Y ++++ +LLMD P+++K+++ + + +Q E I ++T
Sbjct: 485 GLNEQYANIRSHVLLMDPIPTISKIFSYVAQQERQLLGNTGPGINFEPKDISINAAKTVC 544
Query: 52 VILARGGTGYRRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
R G K G P + C HC GHT D C++ HGYP
Sbjct: 545 DFCGRIGHVESTCYKKHGVPSNYDARNKSNGRKACTHCGKIGHTVDVCYRKHGYP 599
>Glyma18g08460.1
Length = 263
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 31/101 (30%)
Query: 8 DHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTGYRRN--S 65
D + +LLMD P +NK+++ + Q+E H T Y ++
Sbjct: 140 DRAISHVLLMDPLPPINKIFSYV----AQQERH------------------TCYCKHGFP 177
Query: 66 YKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
YK+GK + C HC GHT DTC+K HG+P
Sbjct: 178 YKNGKST-------SNHGKACSHCGKNGHTVDTCYKKHGFP 211
>Glyma04g26800.1
Length = 1312
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 7 YDHVKNQILLMDRFPSVNKVYTMILRV---AKQREVHHSLIVLSETTVVILARGGTGYRR 63
+DHV++Q+L D+ PS++ + T +LRV +K S+ ET+ ++ +RG G R
Sbjct: 249 FDHVRDQVLAGDQVPSMDSLITRLLRVPHVSKDENPTDSV----ETSAMVASRGRGGGRN 304
Query: 64 NSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
+ R E +C +CK GHT++ C+ LHG+P
Sbjct: 305 SR---------GGRSGRGERPHCTYCKRMGHTQEFCYSLHGFP 338