Jatropha Genome Database

JcCA0310901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310901.10 + phase: 0 
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g41620.1                                                       115   3e-26
Glyma19g44220.1                                                        96   3e-20
Glyma07g01200.1                                                        67   2e-11
Glyma15g02810.1                                                        65   6e-11
Glyma13g42590.1                                                        64   1e-10
Glyma11g31430.1                                                        59   4e-09
Glyma18g05750.1                                                        56   4e-08
Glyma14g38890.1                                                        55   6e-08
Glyma02g40580.1                                                        54   1e-07
Glyma11g31840.1                                                        53   3e-07
Glyma18g05450.1                                                        51   9e-07

>Glyma03g41620.1 
          Length = 248

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 4/234 (1%)

Query: 12  PVLQKPPGYKDPSKPVPRPLPRKAVLPPAFQPRKVRRTCCGRIWCIVYVSVAAXXXXXXX 71
           P+LQKPPGY+DP    P P PRK +LPP+FQP+  RR+CC    C   +++         
Sbjct: 6   PILQKPPGYRDPDSKPPPPPPRKPMLPPSFQPKPKRRSCCRICCCTFCLTILILILVVVI 65

Query: 72  XXXXXXXWFDPKSPAFHVQSFKISTFDIATKTDGTYLNAATVARVEVRNPNPRLTYRYGV 131
                   +DP  P FH+ SF++   ++    DG YL+A T ARVEV+N + R+T+ +  
Sbjct: 66  AAALFYLIYDPSLPEFHLDSFRVPKLNVTEAADGAYLDADTSARVEVKNRSGRMTWHF-- 123

Query: 132 SEVEITVGKEQ-QTELGSTSLAGFIQAKKNTTSLKIATRVKNAVIEDGVGSRLKSHFKSR 190
           S+ + TV  E     LGST +AGF   +K  T LK  T VK   + +    R+KS  +S+
Sbjct: 124 SQSQFTVSAENGDLNLGSTKVAGFTVKEKGVTGLKAETSVKELALNERQRRRIKSAVESK 183

Query: 191 SMVVNLRAKTTVGLGVMKGLEIGMLGLDVLCDGITLKEIDGGNMPKCTIRTLKW 244
           ++V ++  +T  GLG + G     + + ++C  +T++++  G+ P C+I  LKW
Sbjct: 184 ALVPSVEVRTKTGLG-LGGWNSPSISVTIVCGDVTMRQLQKGDPPLCSITLLKW 236


>Glyma19g44220.1 
          Length = 221

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 93/175 (53%), Gaps = 3/175 (1%)

Query: 12  PVLQKPPGYKDPSKPVPRPLPRKAVLPPAFQPRKVRRTCCGRIWCIVYVSVAAXXXXXXX 71
           P+LQKPPGY+DP+   P P PRK +LPP+FQP++ RR  C RI C  +  +         
Sbjct: 10  PILQKPPGYRDPNSKPPPPPPRKLMLPPSFQPKRKRRNFC-RICCCTFCILILILLLVLV 68

Query: 72  XXXXXXXW-FDPKSPAFHVQSFKISTFDIATKTDGTYLNAATVARVEVRNPNPRLTYRYG 130
                    +DP  P FH+ SF++   ++    DG YL A T ARVEV+N + R+++ + 
Sbjct: 69  IAAALFYLIYDPSLPEFHLGSFRVPKLNVTNAADGAYLAADTAARVEVKNRSGRMSWHFS 128

Query: 131 VSEVEITVGKEQQTELGSTSLAGFIQAKKNTTSLKIATRVKNAVIEDGVGSRLKS 185
            S   ++  +     LGST +AGF   +K  T LK  T VK     D    RLKS
Sbjct: 129 QSRFSVS-AENGDLNLGSTKVAGFTVKEKGVTELKAETSVKELASNDKQRRRLKS 182


>Glyma07g01200.1 
          Length = 254

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)

Query: 80  FDPKSPAFHVQSFKISTFDIATKTDGTYLNAATVARVEVRNPNPRLTYRYGVSEVEITVG 139
           + P+ P F V S K+S+F++ T +    +NA     +   NPN ++ + Y  + V +  G
Sbjct: 81  YRPQRPTFSVTSLKLSSFNLTTPST---INAKFDLTLSTTNPNDKIIFSYDPTSVSLLYG 137

Query: 140 KEQQTELGSTSLAGFIQAKKNTTSLKIATRVKNAVIEDGVGSRLKSHFKSRSMVVNLRAK 199
               T + ST++  F+  ++NTT L+        V++      LK   K +S +V L+ +
Sbjct: 138 ---DTAVASTTIPSFLHRQRNTTVLQAYVTSTEEVVDSDAAMELKRSMKRKSQLVALKVE 194

Query: 200 TTVGLGVMKG-LEIGMLGLDVLCDGITLKEID 230
               +    G  +   +G+ VLCDG+ +   D
Sbjct: 195 LETKVEAQMGVFQTPRVGIKVLCDGVAVSLPD 226


>Glyma15g02810.1 
          Length = 254

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)

Query: 80  FDPKSPAFHVQSFKISTFDIATKTDGTYLNAATVARVEVRNPNPRLTYRYGVSEVEITVG 139
           + P  P F V S K+S  ++ + ++   LN+     V   NPN ++ + Y  + + I  G
Sbjct: 82  YRPHHPTFTVTSLKLSYLNLTSSSNT--LNSRFDITVSATNPNKKILFAYDPTSITILSG 139

Query: 140 KEQQTELGSTSLAGFIQAKKNTTSLKIATRVKNAVIEDGVGSRLKSHFKSRS---MVVNL 196
                ++G  ++ GF   KKNTT +K +       ++    SRLKS  KS++   + VNL
Sbjct: 140 ---DIDVGDGTVPGFQHPKKNTTLIKASILSSGHALQSDEASRLKSSMKSKNGLPLKVNL 196

Query: 197 RAKTTVGLGVMKGLEIGMLGLDVLCDGI 224
             K    +G +K  ++   G+ V CDGI
Sbjct: 197 ETKVKAKMGNLKTPKV---GIRVSCDGI 221


>Glyma13g42590.1 
          Length = 254

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)

Query: 80  FDPKSPAFHVQSFKISTFDIATKTDGTYLNAATVARVEVRNPNPRLTYRYGVSEVEITVG 139
           + P  P F V S K+S  ++ + ++   LN+     V   NPN ++ + Y  + + I   
Sbjct: 82  YRPHHPTFTVTSLKLSYLNLTSSSNT--LNSRFDITVSATNPNKKILFAYDPTSITIL-- 137

Query: 140 KEQQTELGSTSLAGFIQAKKNTTSLKIATRVKNAVIEDGVGSRLKSHFKSRS---MVVNL 196
                +LG  ++ GF   KKNTT +K +       ++    SRLKS  KS++   + VNL
Sbjct: 138 -SADIDLGDGTVPGFQHPKKNTTLIKGSILSSGQALQSDEASRLKSSMKSKNGLPLKVNL 196

Query: 197 RAKTTVGLGVMKGLEIGMLGLDVLCDGI 224
             K    +G +K  ++   G+ V CDGI
Sbjct: 197 ETKVKAKMGNLKTPKV---GIRVSCDGI 221


>Glyma11g31430.1 
          Length = 238

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 12/190 (6%)

Query: 49  TCCGRIWCIVYVSVAAXXXXXXXXXXXXXXWFDPKSPAFHVQSFKISTFDIATKTDGTY- 107
            CC     IV++ + A              +     P  +V++F I+ F +    DG+  
Sbjct: 59  ACCAWSCLIVFILIIAILFLGITYLA----FLKSGMPKINVRAFNITKFQV---DDGSQK 111

Query: 108 LNAATVARVEVRNPNPRLTYRYGVSEVEITVGKEQQTELGSTSLAGFIQAKKNTTSLKIA 167
           +N+     +   N N +L   YG  +V++T    +   LG     GF Q   N T+L + 
Sbjct: 112 MNSVIGLGLIFSNKNDKLKLLYGPLDVDVT---SEDVLLGKKKQGGFSQKPLNVTNLDMT 168

Query: 168 TRVKNAVIEDGVGSRLKSHFKSRSMVVNLRAKTTVGLGVMKGLEIGMLGLDVLCDGITLK 227
             ++NA ++      LKS  K+  MV +L     +G  V K L++  +     C+ I  +
Sbjct: 169 MTLENADVDKYAAEELKSDIKAYEMVFDLYVGGHIGFQVGK-LQMNNVPFLASCNQIKRE 227

Query: 228 EIDGGNMPKC 237
           ++D G  P+C
Sbjct: 228 DVDFGRKPEC 237


>Glyma18g05750.1 
          Length = 200

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 85  PAFHVQSFKISTFDIATKTDGTY-LNAATVARVEVRNPNPRLTYRYGVSEVEITVGKEQQ 143
           P  +V++F I+   +    DG+  +NA     +   N N +L   YG  +V++T    + 
Sbjct: 50  PKVNVRAFNITKLQV---DDGSQKMNAVIGLGLIFSNKNDKLKLLYGPLDVDVT---SED 103

Query: 144 TELGSTSLAGFIQAKKNTTSLKIATRVKNAVIEDGVGSRLKSHFKSRSMVVNLRAKTTVG 203
             LG   L GF Q   N T L +   ++NA ++      L S  K+  MV +L     +G
Sbjct: 104 VLLGKKKLGGFYQNPLNDTQLDMTMTLENADVDKYAAEDLISDIKAYEMVFDLYVGGHIG 163

Query: 204 LGVMKGLEIGMLGLDVLCDGITLKEIDGGNMPKCTIR 240
             V K L++  +     C  I  +++D G  P+C ++
Sbjct: 164 FQVGK-LQMNNVPFLASCHQIKREDVDFGRKPECDVK 199


>Glyma14g38890.1 
          Length = 288

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 15/176 (8%)

Query: 43  PRKVRRTCCGRIWCIVYVSVAAXXXXXXXXXXXXXXWFDPKSPAFHVQSFKISTFDIATK 102
           P K RR+CC R +C +   +                 F PK P + V   K++ FD+A  
Sbjct: 90  PTKKRRSCCCRFFCWLISILLILIVAIGITIGILYLVFRPKLPKYSVDELKVTNFDLA-- 147

Query: 103 TDGTYLNAATVARVEVRNPNPRLTYRY-GVSEVEITVGKEQQTELGSTSLAGFIQAKKNT 161
            D   L+      +  RNPN ++   Y G S +         T+L   SL  F Q  +NT
Sbjct: 148 -DNNSLSVTFNLTITARNPNKKIGIDYRGGSHIS---AWYMDTKLCEGSLPKFYQGHRNT 203

Query: 162 TSLKI--ATRVKNAVIEDGVGSRLKSHFKSRSMV-VNLRAK--TTVGLGVMKGLEI 212
           T L I    + ++A    G+ + L++  +    V +NLR K    + LG +K  +I
Sbjct: 204 TILSIPLTGKTQDAT---GLQNTLQNQLQETGNVPLNLRVKQPVRIKLGKLKLFKI 256


>Glyma02g40580.1 
          Length = 255

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 19/188 (10%)

Query: 31  LPRKAVLPPAFQPRKVRRTCCGRIWCIVYVSVAAXXXXXXXXXXXXXXWFDPKSPAFHVQ 90
           +P K   PP   P+K RR+CC R +C +   +                 F PK P + V 
Sbjct: 49  IPLKQTKPP---PKK-RRSCCCRFFCWLISILLILIVAIGITVGILYLVFRPKLPKYSVD 104

Query: 91  SFKISTFDIATKTDGTYLNAATVARVEVRNPNPRLTYRY-GVSEVEITVGKEQQTELGST 149
             +++ FD+A   D   L+      +  RNPN ++   Y G S +         T+L   
Sbjct: 105 ELRVTHFDLA---DNNSLSVTFNLTITARNPNKKIGIDYRGGSHIS---AWYMDTKLCEG 158

Query: 150 SLAGFIQAKKNTTSLKI--ATRVKNAVIEDGVGSRLKSHFKSRSMV-VNLRAKTTV--GL 204
           SL  F Q  +NTT L I    + ++A    G+ S L++  +    V +NL+ K  V   L
Sbjct: 159 SLPKFYQGHRNTTVLSIPLTGKTQDAT---GLQSTLQNQLQESGNVPLNLKVKQPVRIKL 215

Query: 205 GVMKGLEI 212
           G +K  +I
Sbjct: 216 GKLKLFKI 223


>Glyma11g31840.1 
          Length = 246

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 42  QPRKVRRTCCGRIWCIVYVSVAAXXXXXXXXXXXXXXWFDPKSPAFHVQSFKISTFDIAT 101
           +P K RR+CC R  C     +                 F PK P + V   +IS F++  
Sbjct: 46  KPPKRRRSCCCRFMCWTLSILLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNV-- 103

Query: 102 KTDGTYLNAATVARVEVRNPNPRL-TYRYGVSEVEITVGKEQQTELGSTSLAGFIQAKKN 160
            +D   L A     +  RNPN ++  Y  G S +        +T+L   SL  F Q  +N
Sbjct: 104 -SDNNTLYATFNVAITARNPNKKIGIYYEGGSHIS---AWYMETQLCEGSLPKFYQGHRN 159

Query: 161 TTSLKIATRVKNAVIEDGVGSRLKSHFKSRSMV-VNLRAK--TTVGLGVMKGLEI 212
           TT L +      A   +G+ +R++   +  + V +NL+      V LG +K  ++
Sbjct: 160 TTVLDLPL-TGQAHDANGLVNRIQEQLQQTNNVPLNLKVNQPVRVKLGKLKLFKV 213


>Glyma18g05450.1 
          Length = 244

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 15/160 (9%)

Query: 9   PMNPVLQKPPGYKDPSKPVP-RPLPRKAVLPPAFQPRKVRRTCCGRIWCIVYVSVAAXXX 67
           P  P++  P  Y    K +P R  P     PP     K RR+CC R  C     +     
Sbjct: 18  PHRPLV--PENYAKSDKGIPQRTFPVMHSKPP-----KRRRSCCCRFMCWTLSILLILII 70

Query: 68  XXXXXXXXXXXWFDPKSPAFHVQSFKISTFDIATKTDGTYLNAATVARVEVRNPNPRL-T 126
                       F PK P + V   +IS F++   +D   L A     +  RNPN ++  
Sbjct: 71  AIAITIGILYLVFRPKLPKYSVDQLRISQFNV---SDNNTLYATFNVAITARNPNKKIGI 127

Query: 127 YRYGVSEVEITVGKEQQTELGSTSLAGFIQAKKNTTSLKI 166
           Y  G S +         T+L   SL  F Q  +NTT L +
Sbjct: 128 YYEGGSHIS---AWYMDTKLCEGSLPKFYQGHRNTTVLDL 164