Jatropha Genome Database

JcCA0310831.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310831.20 - phase: 0 
         (569 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g42890.1                                                       566   e-161
Glyma13g42890.2                                                       502   e-142
Glyma15g02550.1                                                       491   e-139
Glyma11g20660.1                                                        84   4e-16
Glyma12g07300.1                                                        83   1e-15
Glyma12g07300.2                                                        50   5e-06

>Glyma13g42890.1 
          Length = 355

 Score =  566 bits (1460), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/354 (76%), Positives = 302/354 (85%), Gaps = 4/354 (1%)

Query: 219 MEFSFGPQKWLPKELIGEK---QEGSESYALGLHAPGFFDKVLNVDGCLLQSEPANTVLA 275
           MEFSFGPQ+WLPKE + ++    + +E+YALGLHAPGFFDK+LNVD CLLQS PAN VLA
Sbjct: 1   MEFSFGPQRWLPKESLQDRIVDDDTNENYALGLHAPGFFDKILNVDNCLLQSHPANKVLA 60

Query: 276 TVQDCWRD-SVGLTPYNVYSHAGFLKHLMLRTGRNAESGSLELMVNFVTSSYKPELLKPL 334
            VQ+CWRD  +G +PYNV+SH GFLKHLMLRTGR+  +   E+MVNFVTSSYKPELLK L
Sbjct: 61  AVQECWRDPQLGFSPYNVHSHKGFLKHLMLRTGRDVTTDQPEVMVNFVTSSYKPELLKFL 120

Query: 335 MEKISAIPEXXXXXXXXXXXXXXXXXXEEEYTLYGKSTITEVLRGLTFQISANSFFQTNT 394
           ++K+S  PE                  EEEYTLYGKS+ITE LRGLTFQISANSFFQTNT
Sbjct: 121 VDKVSVFPEVVSVINNVNTSVGNTSVGEEEYTLYGKSSITETLRGLTFQISANSFFQTNT 180

Query: 395 HQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTLARGAKHVYGYEVVPQAISDAFR 454
           +QAEVLYKLIEDCAG++GD SEIVLDLFCGTGTIGLTLAR  +HVYGYEVVPQAI+DA  
Sbjct: 181 YQAEVLYKLIEDCAGVKGDDSEIVLDLFCGTGTIGLTLARSVRHVYGYEVVPQAITDARL 240

Query: 455 NAELNGITNATFVQGDLNKIGENFGNNFPKPDVVISDPNRPGMHMKLIKFLLKLKAPRIV 514
           NA++NGI NATFVQGDLNKI ENFG NFPKPD+VISDPNRPGMH+KLIKFLL L+APRIV
Sbjct: 241 NAKINGIQNATFVQGDLNKIDENFGKNFPKPDIVISDPNRPGMHIKLIKFLLNLRAPRIV 300

Query: 515 YVSCNPATCARDLDYLCHGVKEQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 568
           YVSCNPATCARDLDYLCHGV+E+NI+GCYKL SLQPVDMFPHTPHIECVCLLEL
Sbjct: 301 YVSCNPATCARDLDYLCHGVEEKNIEGCYKLISLQPVDMFPHTPHIECVCLLEL 354


>Glyma13g42890.2 
          Length = 328

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/320 (75%), Positives = 269/320 (84%), Gaps = 4/320 (1%)

Query: 219 MEFSFGPQKWLPKELIGEK---QEGSESYALGLHAPGFFDKVLNVDGCLLQSEPANTVLA 275
           MEFSFGPQ+WLPKE + ++    + +E+YALGLHAPGFFDK+LNVD CLLQS PAN VLA
Sbjct: 1   MEFSFGPQRWLPKESLQDRIVDDDTNENYALGLHAPGFFDKILNVDNCLLQSHPANKVLA 60

Query: 276 TVQDCWRD-SVGLTPYNVYSHAGFLKHLMLRTGRNAESGSLELMVNFVTSSYKPELLKPL 334
            VQ+CWRD  +G +PYNV+SH GFLKHLMLRTGR+  +   E+MVNFVTSSYKPELLK L
Sbjct: 61  AVQECWRDPQLGFSPYNVHSHKGFLKHLMLRTGRDVTTDQPEVMVNFVTSSYKPELLKFL 120

Query: 335 MEKISAIPEXXXXXXXXXXXXXXXXXXEEEYTLYGKSTITEVLRGLTFQISANSFFQTNT 394
           ++K+S  PE                  EEEYTLYGKS+ITE LRGLTFQISANSFFQTNT
Sbjct: 121 VDKVSVFPEVVSVINNVNTSVGNTSVGEEEYTLYGKSSITETLRGLTFQISANSFFQTNT 180

Query: 395 HQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTLARGAKHVYGYEVVPQAISDAFR 454
           +QAEVLYKLIEDCAG++GD SEIVLDLFCGTGTIGLTLAR  +HVYGYEVVPQAI+DA  
Sbjct: 181 YQAEVLYKLIEDCAGVKGDDSEIVLDLFCGTGTIGLTLARSVRHVYGYEVVPQAITDARL 240

Query: 455 NAELNGITNATFVQGDLNKIGENFGNNFPKPDVVISDPNRPGMHMKLIKFLLKLKAPRIV 514
           NA++NGI NATFVQGDLNKI ENFG NFPKPD+VISDPNRPGMH+KLIKFLL L+APRIV
Sbjct: 241 NAKINGIQNATFVQGDLNKIDENFGKNFPKPDIVISDPNRPGMHIKLIKFLLNLRAPRIV 300

Query: 515 YVSCNPATCARDLDYLCHGV 534
           YVSCNPATCARDLDYLCHGV
Sbjct: 301 YVSCNPATCARDLDYLCHGV 320


>Glyma15g02550.1 
          Length = 328

 Score =  491 bits (1264), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/356 (69%), Positives = 275/356 (77%), Gaps = 35/356 (9%)

Query: 219 MEFSFGPQKWLPKELIGEKQE-----GSESYALGLHAPGFFDKVLNVDGCLLQSEPANTV 273
           MEFSFGP++WLPKEL+ +++       +E+YALGLHAPGFFDK+LNVD CLLQS PAN V
Sbjct: 1   MEFSFGPRRWLPKELLQDRRADDDVGNNENYALGLHAPGFFDKILNVDNCLLQSHPANKV 60

Query: 274 LATVQDCWRD-SVGLTPYNVYSHAGFLKHLMLRTGRNAESGSLELMVNFVTSSYKPELLK 332
           LA VQ+CWRD  +G +PY+V+SH GFLKHLMLRTGR+  +   E+MVNFVTSSYKPELLK
Sbjct: 61  LAAVQECWRDPQLGFSPYSVHSHKGFLKHLMLRTGRDVTTYQPEVMVNFVTSSYKPELLK 120

Query: 333 PLMEKISAIPEXXXXXXXXXXXXXXXXXXEEEYTLYGKSTITEVLRGLTFQISANSFFQT 392
            L++K+S  PE                  EEEYTLYGKS+ITE LRG TFQISANSFFQT
Sbjct: 121 FLVDKVSVFPEVVSVVNNVNTSVG-----EEEYTLYGKSSITETLRGCTFQISANSFFQT 175

Query: 393 NTHQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTLARGAKHVYGYEVVPQAISDA 452
           NT+QAEVLYKLIEDCAG+RGDGSEIVLDLFCGTGTIGLTLAR  +HVYGYEVVPQAI+DA
Sbjct: 176 NTYQAEVLYKLIEDCAGVRGDGSEIVLDLFCGTGTIGLTLARSDRHVYGYEVVPQAITDA 235

Query: 453 FRNAELNGITNATFVQGDLNKIGENFGNNFPKPDVVISDPNRPGMHMKLIKFLLKLKAPR 512
             NA++NGI                              PNRPGMHMKLIKFLL L+APR
Sbjct: 236 HLNAKINGIKKCNIY------------------------PNRPGMHMKLIKFLLNLRAPR 271

Query: 513 IVYVSCNPATCARDLDYLCHGVKEQNIKGCYKLKSLQPVDMFPHTPHIECVCLLEL 568
           IVYVSCNPATCARDLDYLCHGV EQNIKGCYKL SLQPVDMFPHTPHIECVCLLEL
Sbjct: 272 IVYVSCNPATCARDLDYLCHGVVEQNIKGCYKLISLQPVDMFPHTPHIECVCLLEL 327


>Glyma11g20660.1 
          Length = 755

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 57/95 (60%), Gaps = 2/95 (2%)

Query: 373 ITEVLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTL 432
           I + +  L F IS  +FFQ NT  AE LY L  D A L  D   ++ D+ CGTGTIGLTL
Sbjct: 393 IHDYVNNLQFSISPTAFFQVNTLAAEKLYSLAGDWACLGPD--TLLFDICCGTGTIGLTL 450

Query: 433 ARGAKHVYGYEVVPQAISDAFRNAELNGITNATFV 467
           A     V G E+   A+SDA RNAE+NGI N  F+
Sbjct: 451 AHRVGMVIGIEMNASAVSDAHRNAEINGIKNIKFI 485



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 56/141 (39%), Gaps = 33/141 (23%)

Query: 455 NAELNGITNATFVQGDLNKIGENFGNNFPKPDVVISDPNRPGMHMKLIKFLLKLKA-PRI 513
           NAE+ G       +G  ++ G+     F K  V I DP R G+H  +IK L       R+
Sbjct: 619 NAEVGG----EVQKGSTSRNGKTSLQQF-KNVVAIVDPPRAGLHPTVIKALRTHPGLRRL 673

Query: 514 VYVSCNPATCARDLDYLC---------------------------HGVKEQNIKGCYKLK 546
           VY+SCNP T   +   LC                           H  K   I   +   
Sbjct: 674 VYISCNPETLVANAIELCTPSPLKIEKGNKDNRGWRNMSSAGLARHRAKSMPISEAFHPV 733

Query: 547 SLQPVDMFPHTPHIECVCLLE 567
               VD+FPHTPH E V LLE
Sbjct: 734 KAMAVDLFPHTPHCELVMLLE 754


>Glyma12g07300.1 
          Length = 778

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 2/95 (2%)

Query: 373 ITEVLRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTL 432
           I + +  L F IS  +FFQ NT  AE LY L  D + L  D   ++ D+ CGTGTIGLTL
Sbjct: 491 IHDHINNLQFSISPTAFFQVNTLAAEKLYSLAGDWSCLGPD--TLLFDICCGTGTIGLTL 548

Query: 433 ARGAKHVYGYEVVPQAISDAFRNAELNGITNATFV 467
           A     V G E+   A+SDA RNAE+NGI N  F+
Sbjct: 549 AHRVGMVIGIEMNASAVSDAHRNAEINGIKNVKFI 583


>Glyma12g07300.2 
          Length = 300

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 28/109 (25%)

Query: 487 VVISDPNRPGMHMKLIKFLLKLKA-PRIVYVSCNPATCARDLDYLC-------------- 531
           V I DP R G+H  +IK L       R+VY+SCNP T   +   LC              
Sbjct: 191 VAIVDPPRAGLHPTVIKALRTHPGLRRLVYISCNPETLVANAIELCTPSPVKIEKGNKDN 250

Query: 532 -------------HGVKEQNIKGCYKLKSLQPVDMFPHTPHIECVCLLE 567
                        H  K   I   +       VD+FPHTPH E V LLE
Sbjct: 251 RGWRNMSSAGLARHRAKSMPISEAFHPVKAMAVDLFPHTPHCELVMLLE 299